Ggra8013.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra8013.t1
Unique NameGgra8013.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length472
Homology
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BLAST of Ggra8013.t1 vs. uniprot
Match: A0A2V3IRD5 (Putative glucuronosyltransferase PGSIP8 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IRD5_9FLOR)

HSP 1 Score: 334 bits (856), Expect = 1.210e-106
Identity = 197/449 (43.88%), Postives = 288/449 (64.14%), Query Frame = 0 
Query:   24 ADRVALVTSATSSAELVAARTALRSARLNAQLPPNASYVLLTSGAIASREAEAVADADAVQHVRVHTRARV-------LPLFDLPFDRVVYMAPYSLVVAPLAPLLACRFCAAVSRPCAFATSLLVVSPDAGTHARLLHFSQPSSNASRHCADDPHREACILNRFMPLHDAPLFPPPPRPEPPHAMRLPPAMITPHFLYYPRMRWELPSDHCGVQSIIDFSTPPFTRPTNILTLVLLPLNRQWYRYRSQLPHLSTANALSHAMLPLTFLCVMV-ALYLTCLRLPPPSAADPRRLFAIVASVPHDLLVVYWVAASFVLNAVCWALSVHVTQSCASLSLAVVVLLLTKLVCSSVAYAALGSVFMRFASPDDVNQPAATSNTTTHRAALTTLAFNLVEALVVTALVYTANALPAETGFRRLVWLLLCIAIYFAFWLYLVIALFWTWLAAAAS 464
            A ++A+VT+A+S ++L+AARTAL SAR NA LP N +Y+LLT+  I S+ A  VA  DA+ H ++ T+ ++       +PLFDLP+DR++++  +SLVV+PL  L+ C FCA V++PCAF+T L+V++P   THA L   +   +  +  CA DP  EAC+LN+   L D+PLF P         MRLPP +  PH+LYYPRMRWE+PS+HCG Q++IDFSTP F RPTNI+ LVLL LNRQWY YR+QL  + T + + H+ + L  +C++  A+Y    R+   +     R+     +  H + + YW++   + N   W LS+  +Q+ +S+  ++ VL   K+V +++AY  LG +   FA+ DDV      S  ++ RAA+  +A N VE +VV  L+   N+LPAETGFRRL+WL L +A+Y  F LY++I LFW WL A A+
Sbjct:   28 AHKLAVVTTASSPSQLLAARTALLSARQNAHLPENTTYLLLTTTDIPSKTASKVAQTDAIHHRQLPTQPQIANGPYRFIPLFDLPYDRLIFLTAFSLVVSPLDHLIKCHFCAVVTKPCAFSTRLIVLTPHPQTHAALQRLAFTLTKPNAICASDPTPEACVLNQHFNLEDSPLFTPNTNLTD-TPMRLPPGIAVPHYLYYPRMRWEIPSNHCGQQAVIDFSTPQFARPTNIIMLVLLHLNRQWYTYRAQLHDIPTDHNV-HSFVTLFSVCMLAFAVYYQLSRMGSSNRPSTPRVVKWSPAAHHSV-IYYWLSICTLANIASWTLSLQASQTYSSIWPSLSVLCTYKIVTTTLAYICLGDLLRAFATHDDVVTDRV-SAISSKRAAVQCVALNAVELVVVLLLIVLTNSLPAETGFRRLLWLFLSLAVYAMFMLYVMITLFWKWLGAGAN 472
The following BLAST results are available for this feature:
BLAST of Ggra8013.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IRD51.210e-10643.88Putative glucuronosyltransferase PGSIP8 n=1 Tax=Gr... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 380..398
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..7
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 399..421
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 433..461
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..24
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 20..24
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 25..277
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 8..19
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 278..299
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 341..351
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 352..379
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 300..319
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 320..340
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 422..432
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 462..471
NoneNo IPR availableTMHMMTMhelixcoord: 321..343
NoneNo IPR availableTMHMMTMhelixcoord: 434..456
NoneNo IPR availableTMHMMTMhelixcoord: 350..372
NoneNo IPR availableTMHMMTMhelixcoord: 274..296
NoneNo IPR availableTMHMMTMhelixcoord: 399..421
NoneNo IPR availableTMHMMTMhelixcoord: 105..127

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000073_piloncontigtig00000073_pilon:742104..743519 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra8013.t1Ggra8013.t1Gracilaria gracilis GNS1m malemRNAtig00000073_pilon 742104..743519 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra8013.t1 ID=Ggra8013.t1|Name=Ggra8013.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=472bp
MALRFTALLLLLLRLLLLLARARADRVALVTSATSSAELVAARTALRSAR
LNAQLPPNASYVLLTSGAIASREAEAVADADAVQHVRVHTRARVLPLFDL
PFDRVVYMAPYSLVVAPLAPLLACRFCAAVSRPCAFATSLLVVSPDAGTH
ARLLHFSQPSSNASRHCADDPHREACILNRFMPLHDAPLFPPPPRPEPPH
AMRLPPAMITPHFLYYPRMRWELPSDHCGVQSIIDFSTPPFTRPTNILTL
VLLPLNRQWYRYRSQLPHLSTANALSHAMLPLTFLCVMVALYLTCLRLPP
PSAADPRRLFAIVASVPHDLLVVYWVAASFVLNAVCWALSVHVTQSCASL
SLAVVVLLLTKLVCSSVAYAALGSVFMRFASPDDVNQPAATSNTTTHRAA
LTTLAFNLVEALVVTALVYTANALPAETGFRRLVWLLLCIAIYFAFWLYL
VIALFWTWLAAAASALKLDKS*
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