Ggra8012.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra8012.t1
Unique NameGgra8012.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length286
Homology
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BLAST of Ggra8012.t1 vs. uniprot
Match: A0A2V3IRB6 (Dual specificity protein phosphatase 12 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IRB6_9FLOR)

HSP 1 Score: 269 bits (687), Expect = 9.140e-87
Identity = 151/276 (54.71%), Postives = 182/276 (65.94%), Query Frame = 0 
Query:    1 MTAIGHNLHLSALPASAPALPTVSVLLPPLSSYTTLQPLPEHHVFVALADTPDAALLPELDRALRFIHRFCQQPPGVLIHCLHGTSRCVAVALAYLLLIRDEHSAAYQLPPATQVTLELAMLQRAYPDASPSPAFLRQLAAVAQRAPTNPALYTFPPTDGTVLPLEGDELLRLLSQRGASSRSHLLRDAGVHAVAVAAACVRCNAPLLPPGAALPVPSPPPPDGCLRVLPVRWMARCMLHNRGRLQCACGARLGRYDLRAPLAVIRVRADALRWRV 276
            MTAIG NL LSALP S+P  PT+SVL PPL +Y  L P PEHH+F+ L+DTPDA+LL +L  ALRFI+R   Q  GVLIHC HGTSR V++ALAY LL R+         P   V +ELA LQ  YP ASPSP F+RQL AVAQR+P  PALY+FPP +G +LPLE  ELLR++S  G      LLR      +  AA C RC  PLLP GA L  P     +GC++ LPV WM RC++   GRL+C CGAR+GRYDL   LA   V+  AL W++
Sbjct:    1 MTAIGDNLFLSALPLSSPTRPTLSVLQPPLENYEELVPPPEHHLFIPLSDTPDASLLLQLPAALRFIYRHRHQQDGVLIHCFHGTSRSVSIALAYRLLTRERDEDTL---PELLVHMELARLQAVYPSASPSPYFVRQLYAVAQRSPQEPALYSFPPENGDILPLEAAELLRIVSTHGTVFTQILLRHERED-IPCAARCARCRMPLLPSGACLQTPVT---NGCVQTLPVMWMRRCIVDTTGRLRCVCGARVGRYDLSGELAQFWVQDRALDWQL 269
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BLAST of Ggra8012.t1 vs. uniprot
Match: A0A2D4BGH7 (Uncharacterized protein (Fragment) n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BGH7_PYTIN)

HSP 1 Score: 55.1 bits (131), Expect = 8.480e-6
Identity = 47/121 (38.84%), Postives = 57/121 (47.11%), Query Frame = 0 
Query:   21 PTVSVLLPPLSSYTTLQPLPEHHVFVALADTPDAALLPELDRALRFIHRFCQQPP--GVLIHCLHGTSRCVAVALAYLLLIRDEHSAAYQLPPATQVTLELAMLQRAYPDASPSPAFLRQL 139
            PT+S+  P   SY  L          A+ADTPDA++  E DRAL+FI       P   VL+HC  G SR V V  AYL+     HS +          LE   L R  P A P+  FL QL
Sbjct:   34 PTLSLAFPSQLSYLRL----------AVADTPDASIAHEFDRALQFIDSALSSDPTNAVLVHCFVGRSRSVTVVTAYLM---ARHSMSLX------QALERVRLVR--PQARPNSGFLAQL 133
The following BLAST results are available for this feature:
BLAST of Ggra8012.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3IRB69.140e-8754.71Dual specificity protein phosphatase 12 n=1 Tax=Gr... [more]
A0A2D4BGH78.480e-638.84Uncharacterized protein (Fragment) n=1 Tax=Pythium... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000340Dual specificity phosphatase, catalytic domainPFAMPF00782DSPccoord: 45..140
e-value: 6.9E-10
score: 38.9
IPR029021Protein-tyrosine phosphatase-likeGENE3D3.90.190.10Protein tyrosine phosphatase superfamilycoord: 23..150
e-value: 2.7E-17
score: 64.8
IPR029021Protein-tyrosine phosphatase-likeSUPERFAMILY52799(Phosphotyrosine protein) phosphatases IIcoord: 42..145
NoneNo IPR availablePANTHERPTHR45848DUAL SPECIFICITY PROTEIN PHOSPHATASE 12 FAMILY MEMBERcoord: 37..140
NoneNo IPR availablePANTHERPTHR45848:SF2DUAL SPECIFICITY PROTEIN PHOSPHATASE 12coord: 37..140
NoneNo IPR availableCDDcd14498DSPcoord: 37..139
e-value: 4.60753E-17
score: 74.1195

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000073_piloncontigtig00000073_pilon:740921..741778 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra8012.t1Ggra8012.t1Gracilaria gracilis GNS1m malemRNAtig00000073_pilon 740921..741778 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra8012.t1 ID=Ggra8012.t1|Name=Ggra8012.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=286bp
MTAIGHNLHLSALPASAPALPTVSVLLPPLSSYTTLQPLPEHHVFVALAD
TPDAALLPELDRALRFIHRFCQQPPGVLIHCLHGTSRCVAVALAYLLLIR
DEHSAAYQLPPATQVTLELAMLQRAYPDASPSPAFLRQLAAVAQRAPTNP
ALYTFPPTDGTVLPLEGDELLRLLSQRGASSRSHLLRDAGVHAVAVAAAC
VRCNAPLLPPGAALPVPSPPPPDGCLRVLPVRWMARCMLHNRGRLQCACG
ARLGRYDLRAPLAVIRVRADALRWRVAPPPPPPLL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000340Dual-sp_phosphatase_cat-dom
IPR029021Prot-tyrosine_phosphatase-like