Ggra8011.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra8011.t1
Unique NameGgra8011.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length156
Homology
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BLAST of Ggra8011.t1 vs. uniprot
Match: A0A2V3ISD4 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ISD4_9FLOR)

HSP 1 Score: 60.1 bits (144), Expect = 4.590e-8
Identity = 64/111 (57.66%), Postives = 68/111 (61.26%), Query Frame = 0 
Query:    2 ANAPPPPRKRALSGRLRAMRFMQRRAEGVLRLQLSAAXXXXXXXXXXXXXXXXXXXXRA-PTVVLERGAFA-HAPPRAA--RRSFGGFNKLYEPCAPKQPAHPAARASPPP 108
            AN PP   KR+LS RLR MRFMQRRAE  LR      XXXXXXXXXXXXXXX        PT++LE G    H+PP  A  RRSFGGFNKLYE    KQP        PPP
Sbjct:   47 ANRPP---KRSLSNRLRNMRFMQRRAESTLRTXXXXXXXXXXXXXXXXXXXXSHQPPSTKPTILLETGVSTDHSPPPRATCRRSFGGFNKLYE----KQPQQ--LEDQPPP 148
The following BLAST results are available for this feature:
BLAST of Ggra8011.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3ISD44.590e-857.66Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 38..155
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 100..126
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 130..145
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 46..155
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 41..45
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 29..40
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..28
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..45

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000073_piloncontigtig00000073_pilon:740336..740803 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra8011.t1Ggra8011.t1Gracilaria gracilis GNS1m malemRNAtig00000073_pilon 740336..740803 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra8011.t1 ID=Ggra8011.t1|Name=Ggra8011.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=156bp
MANAPPPPRKRALSGRLRAMRFMQRRAEGVLRLQLSAAAAQRQSAAQWQQ
SPTPPPPPRAPTVVLERGAFAHAPPRAARRSFGGFNKLYEPCAPKQPAHP
AARASPPPLAHPPLPPPPPPPPNALPRVKSVIRKRSRRAPRASRPHPPPK
PKPSA*
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