Ggra8007.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra8007.t1
Unique NameGgra8007.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length374
Homology
BLAST of Ggra8007.t1 vs. uniprot
Match: A0A2V3IRC8 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IRC8_9FLOR)

HSP 1 Score: 432 bits (1110), Expect = 5.170e-148
Identity = 236/370 (63.78%), Postives = 290/370 (78.38%), Query Frame = 0
Query:    7 PAAFVQRPLFLTAPRVRRCSTCARRPPSANINDTSDRSREDEIAAKIAKLRKQKRLQSQSSAAAGDSATPTSSSPNADQQEKQAEKPFAFSELPDWKKEQILNNQIQEAEQFFNKGSSLTPGTDT---TRKQDSKEDYQPKVSTWGVFPRPDNISRTYGGGRRIETGGVNLESEESKARDEAVRKRLEAYRKKKGIDMKKEEEHREQIEHALEDSDKLMKKTLPYDAINRLEEVTQFTSERSRVGGKVFLSLALAYEAVGRREDARQIYVRLRSSPFAEISSKAKQLMLGLDAMQELGVDDETQDTGYRVVRFSLPDMNAQVEKRYETAVRHEDEINSKTERISLATNIALVSLMTSPLILLLVLE-WLR 372
            P +FV R  F    +    S C RRP  ANIN+T+D  R DEIAAKIA+LRKQ RL+SQ       SA   S      +Q+ +   P  FS+LPDWKKE ILNNQI EAE+FFNKGS++   ++T   T+ +  + DYQPKVSTWGVFPRP+NISRTYGGGRRI++GGV+LESEESKARDEAV+KRLEAYR  +GIDMKKE+EHRE+IE AL +S  LMKK+LPY AIN LE VT+FTS+RSR+GGKV L+LALAYEAVGRREDA++ Y+ LR++PF EISSKAKQL+ G  AM++LG++DETQ  GYRV+RFSLPD+NA VEKRYET VRHED+++S+TE+ISL TN+AL++LM  P++LLL LE W R
Sbjct:    5 PLSFVNRAPFCRPAQSSAPSICTRRPLQANINETTDPVRGDEIAAKIARLRKQNRLKSQRPQETNSSAADAS---QTSEQKTETSFPHHFSDLPDWKKEDILNNQISEAEKFFNKGSTVESFSETKGSTQAELDETDYQPKVSTWGVFPRPENISRTYGGGRRIKSGGVDLESEESKARDEAVKKRLEAYRATRGIDMKKEDEHREKIESALNESANLMKKSLPYKAINMLESVTEFTSDRSRLGGKVLLALALAYEAVGRREDAKKTYMCLRTNPFTEISSKAKQLLQGFQAMEQLGIEDETQKKGYRVMRFSLPDVNAGVEKRYETVVRHEDQVDSETEKISLGTNLALIALMGGPVLLLLFLELWRR 371          
BLAST of Ggra8007.t1 vs. uniprot
Match: A0A7S0ZBI5 (Hypothetical protein n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZBI5_9RHOD)

HSP 1 Score: 208 bits (530), Expect = 9.900e-61
Identity = 131/314 (41.72%), Postives = 191/314 (60.83%), Query Frame = 0
Query:   36 NIN-DTSDRSREDEIAAKIAKLRKQKRLQSQSSAAAGDSATPTSSSPNADQQEKQAEKPFAFSELPDWKKEQILNNQIQEAEQFFNKGSSLTPGTDTTRKQDSKEDYQPKVSTWGVFPRPDNISRTYGGGRRIETGGVNLESEESKARDEAVRKRLEAYRKKKGIDMKKEEEHREQIEHALEDSDKLMKKTLPYDAINRLEEVTQFTSERSRVGGKVFLSLALAYEAVGRREDARQIYVRLRSSPFAEISSKAKQLMLGLDAMQELGVDDETQDTGYRVVRFSLPDMNA-QVEKRYET-----AVRHEDEINSK 342
            NIN D S   REDEIA KIAKL+K +    ++S  +  S   + SS ++               LP+WK+E++L  +++ AE+F  KG  +               ++PKVSTWGV+PRP+NIS+TYGGG+ I  GG  +  EE + ++EA RK L +YR+  GID++ E+EHR++I+ A+E S +LM KT P++AI  LE VT++ S +S++GG+VFL+LA+  E  GR E+A+++Y  LR SP A  + KAKQL  G  AM++L VD   +    +V+ F LPD+ A     RY+T     A + E EI SK
Sbjct:   43 NINRDDSLSQREDEIAQKIAKLKKNR---IETSGKSNSSKVVSDSSSDS---------------LPEWKQEELLEAEMKRAEEFM-KGPGI---------------HKPKVSTWGVYPRPENISKTYGGGKNIPIGGKKVSDEEQQKKEEATRKLLNSYRESAGIDVRLEDEHRDEIQAAIERSKQLMLKTRPFEAIKELESVTEYVSLKSQLGGEVFLNLAMTLEVCGRNEEAKELYAELRKSPIAYYAQKAKQLSFGFKAMEDLRVDSTREVL--KVMDFELPDVAALSTRNRYDTSYFDFASKREAEIRSK 320          
BLAST of Ggra8007.t1 vs. uniprot
Match: R7QL93 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QL93_CHOCR)

HSP 1 Score: 205 bits (521), Expect = 1.050e-59
Identity = 114/223 (51.12%), Postives = 150/223 (67.26%), Query Frame = 0
Query:   27 TCARRPPSANINDTSDRSREDEIAAKIAKLRKQKRLQSQSSAAAGDSATPTSSSPNADQQEKQAEKPFAFSELPDWKKEQILNNQIQEAEQFFNKGSS---LTPGTDTTRKQDSKEDYQPKVSTWGVFPRPDNISRTYGGGRRIETGGVNLESEESKARDEAVRKRLEAYRKKKGIDMKKEEEHREQIEHALEDSDKLMKKTLPYDAINRLEEVTQFTSERSR 246
            TC R  P ANIN TSD +REDEIAAKIA LRKQKRL+SQ S++ G+          A+ Q +    P +F +LPDWKKE I+ NQI EAE F N  +    + PGTD  +       Y+PKVSTWGVFPRPDNIS+ +GGG++++ GGV+L SE SK RDEAV+++L  YRK +GID+++EEEHRE+IE AL   +  ++ + P  AI  LE V ++  +R R
Sbjct:   96 TCRRTSPYANINQTSDSAREDEIAAKIANLRKQKRLKSQGSSSTGNQ-------DEANTQRRNVGTPMSFQDLPDWKKEDIMQNQISEAEAFLNPSAHKPHVKPGTDKVK-------YKPKVSTWGVFPRPDNISKAFGGGKKVQPGGVDLSSEGSKKRDEAVKEKLAMYRKTRGIDLEREEEHREEIETALAKGEGFIRMSRPQQAIKALEPVVEYICDRQR 304          
BLAST of Ggra8007.t1 vs. uniprot
Match: A0A5J4Z1S6 (Uncharacterized protein n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z1S6_PORPP)

HSP 1 Score: 193 bits (490), Expect = 2.970e-54
Identity = 111/236 (47.03%), Postives = 147/236 (62.29%), Query Frame = 0
Query:   97 SELPDWKKEQILNNQIQEAEQFFNKGSSLTPGTDTTRKQDSKEDYQPKVSTWGVFPRPDNISRTYGGGRRIETGGVNLESEESKARDEAVRKRLEAYRKKKGIDMKKEEEHREQIEHALEDSDKLMKKTLPYDAINRLEEVTQFTSERSRVGGKVFLSLALAYEAVGRREDARQIYVRLRSSPFAEISSKAKQLMLGLDAMQELGVDDETQDTGYRVVRFSLPDMNAQVEKRYETA 332
            SE    K E +L  +++ AE F +  SS   GT      D K  +QPKVSTWGVFPRP NIS  YGGG+ + TGGV+L +EE   + E  RK+L AYRK  GID++KEEEHRE+I+  L+ +  ++ K+ PY+A+  LE V  + S  SR+GG V+L LAL  E +G  E AR++Y  LR SP+++I SK KQL  G  AM  L VD  T   G +V+ F LPD  A    RY+T+
Sbjct:  127 SEAGQKKLEDVLLQEMRAAEAFMSGASS---GTAKASAPDDKPFHQPKVSTWGVFPRPKNISSAYGGGKNLPTGGVDLSNEEELKKQEETRKKLAAYRKAMGIDVEKEEEHREEIKAKLDLARVMVFKSRPYEAVEALESVLDYVSPLSRLGGDVYLELALTNEILGNSERARELYGELRRSPYSDIRSKVKQLAFGFQAMDALKVD--TSREGLKVMDFKLPDFAALTPDRYDTS 357          
BLAST of Ggra8007.t1 vs. uniprot
Match: A0A7S0T4K8 (Hypothetical protein n=1 Tax=Erythrolobus madagascarensis TaxID=708628 RepID=A0A7S0T4K8_9RHOD)

HSP 1 Score: 182 bits (463), Expect = 1.800e-51
Identity = 104/254 (40.94%), Postives = 152/254 (59.84%), Query Frame = 0
Query:  112 IQEAEQFFNKGSSLTPGTDTTRKQDSKED------------------------YQPKVSTWGVFPRPDNISRTYGGGRRIETGGVNL--ESEESKARDEAVRKRLEAYRKKKGIDMKKEEEHREQIEHALEDSDKLMKKTLPYDAINRLEEVTQFTSERSRVGGKVFLSLALAYEAVGRREDARQIYVRLRSSPFAEISSKAKQLMLGLDAMQELGVDDETQDTGYRVVRFSLPDM-NAQVEKRYETAVRHEDE 338
            +Q AE F ++G     G+D+ + ++S ++                        ++PKVSTWGVFPRPDNIS+ YGGGR I  GG+    E+EE + + +  +  L++YR   GID K+EE+HRE +  A+  S KL+K + PY+A+  LE V ++ S +S +GG++ + LALA E VGR EDAR++Y  LR SP + I+SKAKQL  G  AMQEL +D +    G +V+ F+LPD+      +RY+T    E E
Sbjct:    1 MQRAEAFMSRGVGNDSGSDSEQYRESNDEVFEEQEKAQQIDANGVDSSCVDGVHKPKVSTWGVFPRPDNISKAYGGGRTIPRGGLQPREETEEDRKKAQRTKALLDSYRTAMGIDTKREEQHRETVLEAIAKSRKLLKDSRPYEAVRLLESVKEYVSTKSELGGELHMELALALEVVGRTEDARELYAELRKSPVSRIASKAKQLSFGFSAMQELKLDSDG-GAGLKVMDFNLPDLAKLSTARRYDTTYFRESE 253          
BLAST of Ggra8007.t1 vs. uniprot
Match: A0A7S4PEZ1 (Hypothetical protein (Fragment) n=1 Tax=Guillardia theta TaxID=55529 RepID=A0A7S4PEZ1_GUITH)

HSP 1 Score: 154 bits (389), Expect = 8.240e-40
Identity = 92/236 (38.98%), Postives = 137/236 (58.05%), Query Frame = 0
Query:  104 KEQILNNQIQEAEQFFNKGSSLTPGTDTTR-------KQDSKEDYQPKVSTWGVFPRPDNISRTYGGGRRIETGGVNLESEESKARDEAVRKRLEAYRKKKGIDMKKEEEHREQIEHALEDSDKLMKKTLPYDAINRLEEVTQFTSERSRVGGKVFLSLALAYEAVGRREDARQIYVRLRSSPFAEISSKAKQLMLGLDAMQELGVDDETQDTGYRVVRFSLPDMNAQVEKRYETA 332
            KE+    +++ A+Q  +K  S  P  + T          +  E ++PKVSTWGV+ RP +IS+ YGGGR+I  GG     EE +       K+L  YRK  G+D K EEEH E+I+ AL   DK M       A+  LE+VT++TS ++ VGG+V+L+LALAYE +G R  A+  Y +L  +    +SSKAK+L+ G +AM+ L V+   +    +V+ F LP++     KRY+T+
Sbjct:   85 KEEERRRKLERAQQIISKVRS-EPQVERTSGIGGAWSSPEEVESHKPKVSTWGVYERPADISKAYGGGRKIGLGGYTQSEEEREESTAKTMKKLMEYRKSVGVDRKLEEEHMEEIKQALALYDKHMSSGAVSRAVKALEDVTKWTSFKTTVGGQVYLNLALAYEQMGERPKAKSTYTKLVGNGDPNVSSKAKELLYGFEAMEFLRVNATVRQEERKVMNFKLPEVWEYTNKRYDTS 319          
BLAST of Ggra8007.t1 vs. uniprot
Match: A0A7S2YC46 (Hypothetical protein (Fragment) n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2YC46_9STRA)

HSP 1 Score: 137 bits (344), Expect = 4.800e-35
Identity = 76/162 (46.91%), Postives = 111/162 (68.52%), Query Frame = 0
Query:  138 KEDYQPKVSTWGVFPRPDNISRTYGGGRRIETGGVNLESEESKARD-EAVRKRLEAYRKKKGIDMKKEEEHREQIEHALEDSDKLMKKTLPYDAINRLEEVTQFTSERSRVGGKVFLSLALAYEAVGRREDARQIYVRLRSSPFAEISSKAKQLMLGLDAMQ 298
            +E Y+PK  +WG FPRP +IS+ YGGGRR+  G  N   EE+K +  E+ R+RL+ YR+K GID++ E+EH ++IE AL+     M++ +   A++ LE+VT+  S  S+VGGKVFL LA+AYEAVGR  +A ++Y  L  S   +I   AK+L+ G++AMQ
Sbjct:   44 EEMYKPKTGSWGAFPRPRDISKAYGGGRRVGPGYSN---EEAKLKSQESTRERLKKYREKVGIDVESEKEHADEIEEALKIGSLAMQRGMYSTAVSALEKVTKHCSTNSKVGGKVFLELAMAYEAVGRTPEAIKVYSVLSRSRMEDIKFDAKRLLYGIEAMQ 202          
BLAST of Ggra8007.t1 vs. uniprot
Match: A0A7S0UDJ1 (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S0UDJ1_HEMAN)

HSP 1 Score: 134 bits (338), Expect = 1.760e-32
Identity = 73/190 (38.42%), Postives = 114/190 (60.00%), Query Frame = 0
Query:  141 YQPKVSTWGVFPRPDNISRTYGGGRRIETGGVNLESEESKARDEAVRKRLEAYRKKKGIDMKKEEEHREQIEHALEDSDKLMKKTLPYDAINRLEEVTQFTSERSRVGGKVFLSLALAYEAVGRREDARQIYVRLRSSPFAEISSKAKQLMLGLDAMQELGVDDETQDTGYRVVRFSLPDMNAQVEKRYE 330
            ++PKV TWGV+ RP +I + YGGGR+I   G     EE  A      + L  YR K G+D  KE +H ++I  ALE  ++ M+      A+  LE VT++TS  + +GGKV+L+LALAYEA G R+ A++ Y +L ++    IS+KA++L+ G +AM+ + V+        + + F LPD  +  +K+Y+
Sbjct:   22 HKPKVGTWGVYERPADILKAYGGGRKIGVDGFKPSQEEQDAMSAKTAQMLAEYRAKAGVDRTKERKHEKEINEALELHNQYMRNIALSRAVEVLENVTEYTSYGTLLGGKVYLNLALAYEAQGERQKAKRTYTKLLNNGDNFISTKARELLYGFEAMEFMNVNTTFSKEERKTMNFRLPDFASYSKKKYD 211          
BLAST of Ggra8007.t1 vs. uniprot
Match: A0A7S3KWU3 (Hypothetical protein (Fragment) n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3KWU3_9STRA)

HSP 1 Score: 136 bits (342), Expect = 1.520e-31
Identity = 74/169 (43.79%), Postives = 113/169 (66.86%), Query Frame = 0
Query:  141 YQPKVSTWGVFPRPDNISRTYGGGRRIETGGVNLESEESKARD-EAVRKRLEAYRKKKGIDMKKEEEHREQIEHALEDSDKLMKKTLPYDAINRLEEVTQFTSERSRVGGKVFLSLALAYEAVGRREDARQIYVRLRSSPFAEISSKAKQLMLGLDAMQELGVDDETQD 308
            Y+PK  +WG FPRP +IS+ YGGGRRI   G     EE++ +  E  R+RL+ YR+K GI+++ E+EH ++I  ALE +   M++ +   A++ LE+VTQ+ S  S++GGKVFL LA+AYEAVGR ++A  +Y  L  S   ++   AK+L+ GL+AMQ +  +  ++D
Sbjct:  286 YKPKSGSWGAFPRPRDISKAYGGGRRI---GPGFSDEEARLKSTEETRERLKRYREKMGIEVQSEKEHADEINQALEIAALAMRRGVYSTAVSALEKVTQWCSTNSKIGGKVFLELAMAYEAVGRTQEAITVYSTLSRSRMEDVKFNAKRLLYGLEAMQFMQNEVRSKD 451          
BLAST of Ggra8007.t1 vs. uniprot
Match: A0A1Z5KS82 (Uncharacterized protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KS82_FISSO)

HSP 1 Score: 134 bits (336), Expect = 6.360e-31
Identity = 75/159 (47.17%), Postives = 103/159 (64.78%), Query Frame = 0
Query:  139 EDYQPKVSTWGVFPRPDNISRTYGGGRRIETGGVNLESEESKARDEAVRKRLEAYRKKKGIDMKKEEEHREQIEHALEDSDKLMKKTLPYDAINRLEEVTQFTSERSRVGGKVFLSLALAYEAVGRREDARQIYVRLRSSPFAEISSKAKQLMLGLDAM 297
            E Y+PKV +WG F RP +IS+ YGGGRR+  G  N E  E+    EA R+RL+ YR+K GID+K E++H  +I+ AL      M++ +   A+  LE+VT++ S  S+VGGKVFL LA+AYEA GR E+A  +Y  L  S   EI   A +L+ GL+AM
Sbjct:  152 EYYKPKVGSWGAFARPKDISKAYGGGRRVGPGYSNEELSEASV--EATRERLQQYREKVGIDVKSEKDHAAEIDLALRKGAYAMQRGMYSAAVTDLEQVTKYCSSNSKVGGKVFLELAMAYEASGRLEEASFVYRTLSKSRIEEIKINASRLLYGLEAM 308          
The following BLAST results are available for this feature:
BLAST of Ggra8007.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IRC85.170e-14863.78Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A7S0ZBI59.900e-6141.72Hypothetical protein n=1 Tax=Timspurckia oligopyre... [more]
R7QL931.050e-5951.12Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A5J4Z1S62.970e-5447.03Uncharacterized protein n=1 Tax=Porphyridium purpu... [more]
A0A7S0T4K81.800e-5140.94Hypothetical protein n=1 Tax=Erythrolobus madagasc... [more]
A0A7S4PEZ18.240e-4038.98Hypothetical protein (Fragment) n=1 Tax=Guillardia... [more]
A0A7S2YC464.800e-3546.91Hypothetical protein (Fragment) n=1 Tax=Amphiprora... [more]
A0A7S0UDJ11.760e-3238.42Hypothetical protein (Fragment) n=1 Tax=Hemiselmis... [more]
A0A7S3KWU31.520e-3143.79Hypothetical protein (Fragment) n=1 Tax=Amphora co... [more]
A0A1Z5KS826.360e-3147.17Uncharacterized protein n=2 Tax=Fistulifera solari... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 201..224
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 40..55
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 60..87
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 104..131
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 33..141
NoneNo IPR availablePANTHERPTHR35482CYTOCHROME C OXIDASE SUBUNITcoord: 110..369
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 348..371
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 372..373
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..347
NoneNo IPR availableTMHMMTMhelixcoord: 346..368

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000073_piloncontigtig00000073_pilon:729044..730165 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra8007.t1Ggra8007.t1Gracilaria gracilis GNS1m malemRNAtig00000073_pilon 729044..730165 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra8007.t1 ID=Ggra8007.t1|Name=Ggra8007.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=374bp
MLTHSQPAAFVQRPLFLTAPRVRRCSTCARRPPSANINDTSDRSREDEIA
AKIAKLRKQKRLQSQSSAAAGDSATPTSSSPNADQQEKQAEKPFAFSELP
DWKKEQILNNQIQEAEQFFNKGSSLTPGTDTTRKQDSKEDYQPKVSTWGV
FPRPDNISRTYGGGRRIETGGVNLESEESKARDEAVRKRLEAYRKKKGID
MKKEEEHREQIEHALEDSDKLMKKTLPYDAINRLEEVTQFTSERSRVGGK
VFLSLALAYEAVGRREDARQIYVRLRSSPFAEISSKAKQLMLGLDAMQEL
GVDDETQDTGYRVVRFSLPDMNAQVEKRYETAVRHEDEINSKTERISLAT
NIALVSLMTSPLILLLVLEWLRS*
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