Ggra8005.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra8005.t1
Unique NameGgra8005.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length211
Homology
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BLAST of Ggra8005.t1 vs. uniprot
Match: A0A2V3IRC6 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IRC6_9FLOR)

HSP 1 Score: 284 bits (726), Expect = 8.770e-95
Identity = 144/206 (69.90%), Postives = 174/206 (84.47%), Query Frame = 0 
Query:    1 MCAKHAVQVGQVVAVETGKSRVELAKITAISSSGDTVDIILLQPFVKELYIQSKQPSTYERVENIRPIISEYVPSQQGWIVLDQDFQTAKNFFEQRTISGV-KERTVEVTAAPPTELSEQALKRQLFSATRAQAFWAAALSVPLSALCYSAFAAARQTYQANPAGEELLGGQVFRSLVLFTTATASVSALVIGSGLFLYALSKGAE 205
            MC K  +QVGQVVAVET +  V++A++T +SSSGDTVDI++L+ FVKE+Y++SKQ  TYER+EN+RP+ISEYVPSQQGWIVL+QD QTAKN+FEQR +SG  KERTVEVTA PP EL+ +AL+RQ F+ +++QAF+ AALSVPLSALCYSAFA ARQTYQANPAGE+LL GQ+FR LVL  TA  SVSALV+G  L LYALSK  E
Sbjct:    1 MCEKTVIQVGQVVAVETARGLVDIARVTGMSSSGDTVDILVLEEFVKEMYVESKQSPTYERIENVRPVISEYVPSQQGWIVLNQDLQTAKNYFEQRALSGAPKERTVEVTAPPPRELNAEALERQYFTPSKSQAFFGAALSVPLSALCYSAFAGARQTYQANPAGEDLLSGQIFRKLVLLVTAAGSVSALVVGCALLLYALSKTEE 206
The following BLAST results are available for this feature:
BLAST of Ggra8005.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IRC68.770e-9569.90Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 173..200
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 133..153
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 201..210
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 154..172
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..132
NoneNo IPR availableTMHMMTMhelixcoord: 132..154
NoneNo IPR availableTMHMMTMhelixcoord: 178..200

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000073_piloncontigtig00000073_pilon:726043..726675 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra8005.t1Ggra8005.t1Gracilaria gracilis GNS1m malemRNAtig00000073_pilon 726043..726675 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra8005.t1 ID=Ggra8005.t1|Name=Ggra8005.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=211bp
MCAKHAVQVGQVVAVETGKSRVELAKITAISSSGDTVDIILLQPFVKELY
IQSKQPSTYERVENIRPIISEYVPSQQGWIVLDQDFQTAKNFFEQRTISG
VKERTVEVTAAPPTELSEQALKRQLFSATRAQAFWAAALSVPLSALCYSA
FAAARQTYQANPAGEELLGGQVFRSLVLFTTATASVSALVIGSGLFLYAL
SKGAEDEQTT*
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