Ggra8000.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra8000.t1
Unique NameGgra8000.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length1132
Homology
The following BLAST results are available for this feature:
BLAST of Ggra8000.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 926..946
NoneNo IPR availableGENE3D3.40.395.10Adenoviral Proteinase; Chain Acoord: 921..1044
e-value: 1.1E-6
score: 30.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 778..815
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 675..701
IPR007527Zinc finger, SWIM-typePROSITEPS50966ZF_SWIMcoord: 443..486
score: 8.641884

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000073_piloncontigtig00000073_pilon:639025..647273 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra8000.t1Ggra8000.t1Gracilaria gracilis GNS1m malemRNAtig00000073_pilon 639025..647273 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra8000.t1 ID=Ggra8000.t1|Name=Ggra8000.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=1132bp
MIATQDITQCGHVKGKILEDYMPLVPPPGIREKLVVFYGNTNTQKILKDI
EELYLALDEKHGKQKSFGPHSFCVVQRVQLNHVHHFVTKHSPSIKMLACS
RDALSNKEVMFALTSFRRAVPGGRGSLLKLLRYLNEQCPSYVFEHITLRN
VVKSLCNNDRDASDLLQHLQDRRQKGKVEYLDYGVEQESGALQHVTWTLE
ESKDVFSRCGDIMFWDSTHNTTSYEYRLFDTTRNFLYCKRLLASWHEAFD
VNLPPIIFTDGDEAMSLAIASVPYSLNIHHLLCTFHLFDQNVKAKLNPAL
TVRSGASSWVIFRNNLSSCRNAGNEDDLIRLWNQLLQEWFPDTPNNRNSR
TYLDEHVWNVAGNLGISRFAVQEVAHEIERPHGLSFAKNAFDVQIISGDN
HSFPFKIIAQGTTFVTYEDLHKREPEFQENDHPQLSSRTNMGVKIALKKS
QGDEDEYMVRIDCECMYTTRMGLPCRHLFSICLRLDGMEEYTHQLRSRTY
LSFIEVLLSHVVCRRWIAPSATEKSRIESMCKNISQRFADMQDTDASSGS
NDLRKWVQQSNVKQDICPSHGEKYPSDVRNALSLHAKQGVCPSEDMKGLE
SRRFPLFDKIQKLVCFAGGRDSLRSNSYDTIERPAVSNTEDHSLGSRSER
VDEMVSEFNDEKQQLLVRTPRKRHDSRKANKNSIVHNKTRPRRTLQKQRS
RRLPRKFLKSHIPAVLEPKPVLEGFACHLCTVIGIQNNPQNVRQHFASKH
EHEGPIPSFEELRKAAVRQLPDIGEKLSLPRSIARTKSSMSQESDKDLKE
SSSSDGDGSNPASLHFGAVRARKSIPMYCAKTSRKAEYVTPNTFVVNTWG
EIDSSTRVQMFWNLDLRWYIGTATLEANEKENLGGRREVNIRYDDGDLEQ
TSDLSKVRWHVITKGSGYPQLSYDVKEELRLKYNQAMRTVLQKEREGYNG
DFIIGKGEIDIFSLDFISLRPRQWLTDAIVEAFLLRLVQISKHEEDCRFM
VFSSFLIPKSKVAGTHLTKSIDDVSAAIKKSTQDRVIAASVELRFKILPR
ISLTSEEMSKRLDALFAEAASMGRSVPQVINNEAVKDAELESNKGKEMGV
DSSTVSVDGDDAAIEALNNMDITPAVTNTGH*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007527Znf_SWIM