Ggra7999.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Ggra7999.t1
Unique Name	Ggra7999.t1
Type	polypeptide
Organism	Gracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length	567

Homology

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BLAST of Ggra7999.t1 vs. uniprot
Match: A0A2V3IEY1 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IEY1_9FLOR)

HSP 1 Score: 634 bits (1636), Expect = 7.210e-222
Identity = 324/554 (58.48%), Postives = 406/554 (73.29%), Query Frame = 0

Query:    1 MELRVAAKPSALAVIIGAVELGLGELFKFSSDLAFSWYRRKELYNTGHFRIRANPYLQRPDAYFSTAALVVLLALTIVLEFSIETATFPDSTRVPLSRNILCFGPKRDTRYFNKHGPQTSELDDERVAYYVTQANCETSLLDLSLQGAAALELGYPDCLPGFERRRIDLVLALQGGGVGFVGNSDAGDPHLDYGLERNGEIVAPDAGEELASASFWIVMMRSQNRSAAFWKFGDDRATERVASNLGVPTSFLSNSPVTFDDESIVNVTCSSNSRQCYDSVRSAAQTATPVVQTYVEDDLSLVVSSLKNINSSLCIFDSRMEVEVSWIFLNLFIPQVERNGRNGPTIVRVTIKGDARCLSELPRESARMYLDSMERISLIEALNTTQSASFDNMRTVLQKAAVITGMKTSAESGERCQPKGVVNGSTVGAAELAVTLTFSALLLVMVIVLLGTSLAAYRTCPVRTDPLDALWPVQLLLEQTGDSEAESRDANESGGAMESRDGNGLRLVQ-----TRGF-LSSAEDLWVGVSRDSGAMRLTAHTGHVDTHAVHGG 548
            MELR++AKPS LAVIIG +EL L ELFK ++D A +W+RRK+LY+ G FR+RANPYLQ+   Y +T  L VLL LTIVLE SI++A FP S+RVP+ + + CFGP RDTRYFNK GP+ SELDD+RVA Y+ QA C   +LDLS+QGAAALE GYP CLPGF  R  D VL +QGG VGFVGNS+AGDPHLDYG+ER+GEIV+PD G+ LA  SFW++ +    +S AFW FG  R  ERV +NL +P  F+ ++P  F  ES  NVTC+SN+R+CYD VR  A +  PVV++Y E+ L++V+SSLKN +SSLCIFDS M+++VSWI+LNLFIP VER+GRNGP IVR+ I+G ARC+S+LPR+S+RMYLD+MER+ L E LNTT +ASFD+ R VLQ+AAVI GMKT  E G  CQP  V+ GSTVGAAEL VT  FSALLL+ V+ L   ++AA R+CPVR DPL+ LWPVQLL+ +T + E ++  A   G    S  G   R V+     TR   LSSA+DLWVG+  + G   LTAH+     H V  G
Sbjct:    1 MELRISAKPSVLAVIIGVIELILSELFKLTADCASAWHRRKQLYHNGRFRVRANPYLQQRHTYLTTGLLFVLLVLTIVLELSIDSAAFPSSSRVPIDQGVRCFGPTRDTRYFNKRGPRNSELDDDRVASYIKQAGCGQGMLDLSVQGAAALETGYPGCLPGFASREFDEVLGIQGGAVGFVGNSEAGDPHLDYGVERDGEIVSPDVGDMLAGTSFWLLSIWGLGKSVAFWSFGGGRVEERVGTNLAIPKRFIDDTPKVFRAESTANVTCTSNARECYDMVRPKALSVDPVVRSYRENTLAVVISSLKNHDSSLCIFDSSMDMQVSWIYLNLFIPDVERDGRNGPAIVRLRIRGRARCMSKLPRQSSRMYLDAMERVVLNETLNTTDTASFDSARDVLQRAAVIIGMKTLPEEGVPCQPLAVMEGSTVGAAELIVTAVFSALLLLFVVALFAMTIAAQRSCPVRVDPLNPLWPVQLLVAETREREEDNLRAGSDGPPDVSMGGTAQRRVRALRRHTRSLQLSSADDLWVGLEDEGGVTHLTAHSSDDGGHRVQYG 554

The following BLAST results are available for this feature:

BLAST of Ggra7999.t1 vs. uniprot

BLAST of Ggra7999.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A2V3IEY1	7.210e-222	58.48	Uncharacterized protein n=1 Tax=Gracilariopsis cho...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 481..502
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 536..566
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 84..431
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 432..457
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 458..566
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 62..83
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 1..61
None	No IPR available	TMHMM	TMhelix		coord: 432..454

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
tig00000073_pilon	contig	tig00000073_pilon:608622..610322 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria gracilis GNS1m male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Ggra7999.t1	Ggra7999.t1	Gracilaria gracilis GNS1m male	mRNA	tig00000073_pilon 608622..610322 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Ggra7999.t1 ID=Ggra7999.t1|Name=Ggra7999.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=567bp
MELRVAAKPSALAVIIGAVELGLGELFKFSSDLAFSWYRRKELYNTGHFR
IRANPYLQRPDAYFSTAALVVLLALTIVLEFSIETATFPDSTRVPLSRNI
LCFGPKRDTRYFNKHGPQTSELDDERVAYYVTQANCETSLLDLSLQGAAA
LELGYPDCLPGFERRRIDLVLALQGGGVGFVGNSDAGDPHLDYGLERNGE
IVAPDAGEELASASFWIVMMRSQNRSAAFWKFGDDRATERVASNLGVPTS
FLSNSPVTFDDESIVNVTCSSNSRQCYDSVRSAAQTATPVVQTYVEDDLS
LVVSSLKNINSSLCIFDSRMEVEVSWIFLNLFIPQVERNGRNGPTIVRVT
IKGDARCLSELPRESARMYLDSMERISLIEALNTTQSASFDNMRTVLQKA
AVITGMKTSAESGERCQPKGVVNGSTVGAAELAVTLTFSALLLVMVIVLL
GTSLAAYRTCPVRTDPLDALWPVQLLLEQTGDSEAESRDANESGGAMESR
DGNGLRLVQTRGFLSSAEDLWVGVSRDSGAMRLTAHTGHVDTHAVHGGGN
SDTARARRKTSSPKGC*