Ggra7993.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra7993.t1
Unique NameGgra7993.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length172
Homology
BLAST of Ggra7993.t1 vs. uniprot
Match: A0A2V3IHM5 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IHM5_9FLOR)

HSP 1 Score: 223 bits (569), Expect = 3.050e-71
Identity = 112/171 (65.50%), Postives = 133/171 (77.78%), Query Frame = 0
Query:    1 MKGNVVWNLRSALPADVDGVSRVVGPVLPESIISSLVEDSECCVVCDASVKGSKEGEGYRDVVLGCALVDVAIVVSGPAIVKQADFITVMTHPQLPNDAVVRRKLVLGALKKMKDAGVGKVSSTVAVDNTDRIELLTSCLFKSQGASEVEGGVKLVCNLSAENPDPEKKMF 171
            +KGN VWNLRSA P D+ G+S V+GP LP+SI++SLVEDS CCVVCD S+KG KE EGYR+VV+G ALVDVAIV+    IVKQADFITV  HP LP+  +VRRKLVLG LKKMK+ GV +V+S VA +N  R++LL SCLFK +  SE  G V LVCNL  ENPDPEKK+ 
Sbjct:   64 IKGNFVWNLRSAAPQDIAGISNVIGPGLPDSIVASLVEDSTCCVVCDTSIKGRKESEGYRNVVMGAALVDVAIVLRESNIVKQADFITVAAHPDLPDGDMVRRKLVLGCLKKMKEEGVSEVTSVVAEENESRLQLLKSCLFKEKSRSE--GRVNLVCNLGMENPDPEKKLL 232          
BLAST of Ggra7993.t1 vs. uniprot
Match: A0A7S2ZMX4 (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZMX4_9RHOD)

HSP 1 Score: 66.6 bits (161), Expect = 2.610e-10
Identity = 59/180 (32.78%), Postives = 89/180 (49.44%), Query Frame = 0
Query:    1 MKGNVVWNLRSALPADVDGVSRVVGPVLPESIISSLVEDSE-CCVVCDASVKGSKEGEGYR---DVVLGCALVDVA---IVVSGPAIVK---QADFITVMTHPQLPNDAVVRRKLVLGALKKMKDAGVGKVSSTVAVDNTDRIELLTSCLFKSQGASEVEGGVKLVCNLSAENPDPEKKM 170
            MKG  VW LR A   D   ++ + G V   +++  L+  SE   +V   ++KG +EG       +VV+G  L +V+    V  GPA  K     D   +    ++P    V +KL+LGAL+KMK A V +   T+    ++R  +L S  F     SE +    L  NL + NPDP+KK+
Sbjct:   41 MKGAPVWTLREATSEDAGKIAGL-GDVFDANLVDGLISTSEGSALVASVNLKGGEEGGDQAQLTNVVVGAVLPNVSKDVTVPGGPADQKLKMTGDIALLTVDERMPEKDDVEKKLLLGALRKMKLAQVPEAYVTIR-KGSERKTVLESSGFAV--TSEDDDEETLFANLLSLNPDPQKKI 216          
The following BLAST results are available for this feature:
BLAST of Ggra7993.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3IHM53.050e-7165.50Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A7S2ZMX42.610e-1032.78Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000073_piloncontigtig00000073_pilon:597082..597597 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra7993.t1Ggra7993.t1Gracilaria gracilis GNS1m malemRNAtig00000073_pilon 597082..597597 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra7993.t1 ID=Ggra7993.t1|Name=Ggra7993.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=172bp
MKGNVVWNLRSALPADVDGVSRVVGPVLPESIISSLVEDSECCVVCDASV
KGSKEGEGYRDVVLGCALVDVAIVVSGPAIVKQADFITVMTHPQLPNDAV
VRRKLVLGALKKMKDAGVGKVSSTVAVDNTDRIELLTSCLFKSQGASEVE
GGVKLVCNLSAENPDPEKKMF*
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