Ggra7992.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra7992.t1
Unique NameGgra7992.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length350
Homology
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BLAST of Ggra7992.t1 vs. uniprot
Match: A0A2V3IHK1 (DUF1995 domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IHK1_9FLOR)

HSP 1 Score: 235 bits (600), Expect = 4.320e-72
Identity = 151/295 (51.19%), Postives = 187/295 (63.39%), Query Frame = 0 
Query:   62 PPTDVDGTVRLASASLDAALRGGHRRARVAALIPGLNPLVEETFAFSSSTLNTLALHTALATPTLREAPRCALLFESAGAAAAAATQFRRAREALPDTLYVSTF-DAPDQFANVLVAPRAVRGDAVLPVLEAAVRAAPRALWVMLNDQLRGDGAAVGVRHSARRDAFERSFVLAFYFRNLFLVRRPSLQADEKGALMFRYGRDWRAFALQSGRRYALVGEWAQRPD--------ASLVARLVERSLDAAAXXXXXXXXXXXXXXXXXXXADARFLQLVVLGGALAAALSAALQLR 347
            PPT VD TVRLAS S++AAL+ G RR RV A+IPGLN  VEET+ +SS+TLNT+AL T L T  +  A  C LLF SAGAAAAAATQ+RR    LP+ +   +F D P + ANVLVAP A RGD +LP+LE AV +AP+A+W++LN  L  D AAVG+R SARR  FE SF  AFYFRN+F+V+RP+L+A EKGAL+F YG  W  FALQ+   Y LV    + P         ++  AR V RS  A                     ADA FL+ +    AL AA+ AAL+LR
Sbjct:   33 PPTSVDETVRLASQSVNAALQAGQRRVRVDAIIPGLNVRVEETYPYSSATLNTVALQTVLNTDLIGGAQSCTLLFPSAGAAAAAATQYRRDGVTLPEGVRTGSFSDTPSEHANVLVAPVATRGDPLLPLLEGAVASAPQAVWMLLNADLSADRAAVGMRESARRARFEDSFERAFYFRNVFMVKRPTLRAVEKGALLFCYGAGWSVFALQTDG-YELVKRCDKMPSVEELTSVVSAASARNVSRSRAAE-----------------NAGADAAFLRTIAGSAALVAAVLAALRLR 309
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BLAST of Ggra7992.t1 vs. uniprot
Match: A0A835YIU5 (DUF1995 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YIU5_9STRA)

HSP 1 Score: 94.7 bits (234), Expect = 1.210e-17
Identity = 75/207 (36.23%), Postives = 105/207 (50.72%), Query Frame = 0 
Query:   63 PTDVDGTVRLASASLDAALRGGHRRARVAALIPGLNPLVEETFAFSSSTLNTLALHTALATPTLREAPRCALLFESAGAAAAAATQFRRAREALPD-----TLYVSTFDAPDQFANVLVAPRAVRGDAVLPVLEAAVRAAPRALWVMLNDQLRGDGAAVGVRHSARRDAFERSFVLAFYFRNLFLVRRPSLQADEKGALMFRYGRDW 264
            P  +D     A   L AA+  G +R +V   +PGLNP +E +  +++  L  LA   +L  P L       LLF SAG AA A   F      LP+     +L   +  A D  A V+V PR   GD V+  +E     AP+A  V++N  L G+  A+G+    RR A   SF  A+YFRNLF +RRP +   E+G L+ ++GR W
Sbjct:    2 PAGIDDVASQALEGLAAAVSSGQKRLKVDIFVPGLNPKLEGSAPYNAGLL--LAFVKSLL-PALDACANIKLLFSSAGDAAMAQKTFGDMGWRLPEGTRFASLSPGSVTAEDG-AIVIVNPRNSVGDPVILDVEKVALKAPQATIVLVNPDL-GEKVALGIIERDRRSALLASFKQAYYFRNLFYMRRPDMVPVERGGLVCQWGRGW 203
The following BLAST results are available for this feature:
BLAST of Ggra7992.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3IHK14.320e-7251.19DUF1995 domain-containing protein n=1 Tax=Gracilar... [more]
A0A835YIU51.210e-1736.23DUF1995 domain-containing protein n=1 Tax=Tribonem... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR018962Domain of unknown function DUF1995PFAMPF09353DUF1995coord: 63..288
e-value: 3.0E-22
score: 79.7
NoneNo IPR availablePANTHERPTHR35509DOMAIN PROTEIN, PUTATIVE (DUF1995)-RELATEDcoord: 39..294
NoneNo IPR availablePANTHERPTHR35509:SF1DOMAIN PROTEIN, PUTATIVE (DUF1995)-RELATEDcoord: 39..294
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..48
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 18..30
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 31..48
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 49..325
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 347..349
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 326..346
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..17

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000073_piloncontigtig00000073_pilon:595604..596653 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra7992.t1Ggra7992.t1Gracilaria gracilis GNS1m malemRNAtig00000073_pilon 595604..596653 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra7992.t1 ID=Ggra7992.t1|Name=Ggra7992.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=350bp
MQSTPSLGAAAMQSTPPLGTAFAFASAFASAPRALPAAAAAAAGAAEAAG
ARRGVRACAATPPTDVDGTVRLASASLDAALRGGHRRARVAALIPGLNPL
VEETFAFSSSTLNTLALHTALATPTLREAPRCALLFESAGAAAAAATQFR
RAREALPDTLYVSTFDAPDQFANVLVAPRAVRGDAVLPVLEAAVRAAPRA
LWVMLNDQLRGDGAAVGVRHSARRDAFERSFVLAFYFRNLFLVRRPSLQA
DEKGALMFRYGRDWRAFALQSGRRYALVGEWAQRPDASLVARLVERSLDA
AATAAADDDDGGSGGGGGDAAADARFLQLVVLGGALAAALSAALQLRQP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR018962DUF1995