Ggra7991.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra7991.t1
Unique NameGgra7991.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length392
Homology
BLAST of Ggra7991.t1 vs. uniprot
Match: A0A2V3IK85 (E3 ubiquitin-protein ligase n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IK85_9FLOR)

HSP 1 Score: 592 bits (1526), Expect = 1.290e-210
Identity = 303/394 (76.90%), Postives = 333/394 (84.52%), Query Frame = 0
Query:    1 MPPSTPRRR--IFHVESTRLRSNVADQVQRDLLPAGRMLSVFLVLCELLAEFAVLAWSRGQTCKPPLRFWLLVLIVLQLTTVLLNCLNIYQRRAAMDSFRHHRNGLSSSELDMYADAPDAPVPPSPAPNDVVVQLM-QQPSPASDPDSRPLLDADISYDEQQILAAVRQINHSPTARRLSPHIPQSPHHALSPSSSREFAQYEQQSEPPYNIVSSQFVDRFIRIVNLWYLAWFIIGSIWVSDGGTCSTEAPHLYRLIVALTIIYYALLFLPLACFCLIVCCLPLFILVYRIMLPYAERERRRARAADPAQVQNLNSITFSPETFTAHAGSDSLDDASCVICLCDYEDGEIVRFLPCKHHFHKDCVDVWLRLDKACCLCKQDIDAHNSSPASSPV 391
            MPPS PRRR  IFHVESTRLRSNVADQVQRDLLPAGRMLSVFLVLCEL AEFAVL WSRG TC  PLRFWL +LI+LQ+TTVLLNCLNI QRRA M+SFR HRNGLS++++DMYAD P AP   SPA NDV+VQ+M QQ + AS+ D  PLLD ++  D+   +  ++Q++H    +    H  QSPH +  PSS REF  Y+Q SE    +VS QFVD FIR+VNLWYLAWFI+GSIWVSDGGTCSTEAPHLYRLIVALTIIYYALLFLPLACFCLIVCCLPLFIL+YRIMLPYAERERRRARAADPAQVQNL+SITFS ETF  H GS++LDDASCVICLCDYEDGE VRFLPCKHHFHKDCVDVWLRLDKACCLCKQDIDAHNSSPASS V
Sbjct:    1 MPPSAPRRRSGIFHVESTRLRSNVADQVQRDLLPAGRMLSVFLVLCELFAEFAVLVWSRGHTCDRPLRFWLAILIMLQVTTVLLNCLNICQRRAGMESFRLHRNGLSATDIDMYADTPSAPSTSSPASNDVIVQVMHQQSAAASENDRMPLLDHELQQDQSTHMV-LQQLHHQSQPQSHPNHPXQSPHSSTPPSSQREFPHYQQLSESSRALVSPQFVDGFIRLVNLWYLAWFILGSIWVSDGGTCSTEAPHLYRLIVALTIIYYALLFLPLACFCLIVCCLPLFILIYRIMLPYAERERRRARAADPAQVQNLSSITFSAETFLTHTGSENLDDASCVICLCDYEDGETVRFLPCKHHFHKDCVDVWLRLDKACCLCKQDIDAHNSSPASSLV 393          
BLAST of Ggra7991.t1 vs. uniprot
Match: R7Q7W7 (RING-type domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q7W7_CHOCR)

HSP 1 Score: 314 bits (804), Expect = 1.870e-102
Identity = 149/181 (82.32%), Postives = 163/181 (90.06%), Query Frame = 0
Query:  211 SSQFVDRFIRIVNLWYLAWFIIGSIWVSDGGTCSTEAPHLYRLIVALTIIYYALLFLPLACFCLIVCCLPLFILVYRIMLPYAERERRRARAADPAQVQNLNSITFSPETFTAHAGSDSLDDASCVICLCDYEDGEIVRFLPCKHHFHKDCVDVWLRLDKACCLCKQDIDAHNSSPASSPV 391
            S++  DR++RIVN WYL WFI+GS WVSDGGTCST APHLYRLIVALTIIYYALLFLPLACFCLIVCCLPLFILVYRIMLPYAER+RRR RAADPAQVQNLNSI +SP TF   AG+DSL+DASCVICLC+YE+GE VRFLPCKHHFH+DCVDVWLRLDKACCLCKQDIDA  + P + PV
Sbjct:  118 STELFDRYVRIVNAWYLVWFILGSFWVSDGGTCSTTAPHLYRLIVALTIIYYALLFLPLACFCLIVCCLPLFILVYRIMLPYAERDRRRPRAADPAQVQNLNSIEYSPATFANLAGNDSLEDASCVICLCEYEEGETVRFLPCKHHFHQDCVDVWLRLDKACCLCKQDIDAQ-TQPLTPPV 297          
BLAST of Ggra7991.t1 vs. uniprot
Match: M2XIL2 (Zinc finger (C3HC4-type RING finger) family protein n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2XIL2_GALSU)

HSP 1 Score: 249 bits (637), Expect = 2.490e-76
Identity = 154/386 (39.90%), Postives = 206/386 (53.37%), Query Frame = 0
Query:    9 RIFHVESTRLRSNVADQVQRDLLPAGRMLSVFLVLCELLAEFAVLAWSRGQTCKPPLRFWLLVLIVLQLTTVLLNCLNIYQRR--AAMDSFRH-----HRNGLSSSELDMYADAPDAPVPPSPAPNDVVVQLMQQPSPASDPDSRPLLDADISYDEQQILAAVRQINHSPTARRLSPHIPQSPHHALSPSSSREFAQYEQQSEPPYNIVSSQF----VDRFIRIVNLWYLAWFIIGSIWVSDGGTCSTEAPHLYRLIVALTIIYYALLFLPLACFCLIVCCLPLFILVYRIMLPYAER-ERRRARAADPAQVQNLNSITFSPETFTAHAGSDSLDDASCVICLCDYEDGEIVRFLPCKHHFHKDCVDVWLRLDKACCLCKQDIDAH 382
            R+   ESTR+R+NV D+ QRDLLPAGR+L+V LV  EL AE  VL +S  ++C  PL FW+ VLI +QL +++LN +     R  A+++S        H  G SS                                              + +  + I                             PS S E  + E   E    I  S +    V R++R++N +YL WFI+GSIW+S+  TC+  APHLYRL++AL +IYYALL LPLACFCLI+CCLPLFI   R++LPYAE  +RRR RAA   Q+ NL   ++       H   +  +D SCVICL DY DG+++R LPCKHH+HK C+D WL LDK+C LCK+DID+ 
Sbjct:   58 RLLRQESTRVRNNVVDRFQRDLLPAGRLLTVLLVTSELTAELLVLIFSWNKSCDRPLHFWICVLIFIQLFSLVLNLVGSRYSRVFASLESLSQEEGTRHETGSSSG---------------------------------------------VFFRAENIYRGF-------------------------PSGSSEIEETESLEESGNTIFESMYHNELVSRWLRLLNAFYLVWFIVGSIWLSECETCNKTAPHLYRLVLALIVIYYALLGLPLACFCLIMCCLPLFI---RLLLPYAESTQRRRGRAATAEQINNLPCSSY------VHGSFEREEDTSCVICLTDYIDGDMIRHLPCKHHYHKKCIDEWLALDKSCPLCKKDIDSR 364          
BLAST of Ggra7991.t1 vs. uniprot
Match: A0A1X6NVI3 (RING-type domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NVI3_PORUM)

HSP 1 Score: 261 bits (667), Expect = 3.060e-74
Identity = 163/388 (42.01%), Postives = 211/388 (54.38%), Query Frame = 0
Query:   12 HVESTRLRSNVADQVQRDLLPAGRMLSVFLVLCELLAEFAVLAWSRGQTCKPPLRFWLLVLIVLQLTTVLLNCLNIYQRRAAMDSFRHHRNGLSSSELDMYADAPDAPVPPSPAPNDVVVQLMQQPSPASDPDSRPLLDADISYDEQQILAAVRQINHSPTARRLSPHIPQSPHHALSPSSSREFAQYEQQSEPPYNIVSSQFVDRFIRIVNLWYLAWFIIGSIWVSDGGTCSTEAPHLYRLIVALTIIYYALLFLPLACFCLIVCCLPLFILVYRIMLPYAERERRRARAADPAQVQNLNSITFSPETFTAHAGSDSLD------------------DASCVICLCDYEDGEIVRFLPCKHHFHKDCVDVWLRLDKACCLCKQDIDA 381
            H ESTR+RSNVA+QV+RDL PAG +L++ LV  E++AE  VLA S G  C  PLR WL+VLIVLQL T+ L+ + I   R         RN   +++                       +  +Q +PA                     AA              P +P S     +  S  E A  E +          + V  ++R +N W+L  F++ S+WVS+GGTC+  APHLYRL VALT+IYYALLFLPLACFCLIVCCLPLFI++YR+ LPYAERE RRAR+AD  Q+  L S  ++P   ++ A                        +A+CVICLC+Y  GE+V  LPC+HHFHK C+D WL  DK+C LCKQDIDA
Sbjct: 1056 HRESTRVRSNVAEQVRRDLHPAGLLLTLALVSAEVVAELGVLAISAGAPCDRPLRPWLIVLIVLQLATIALSGIRINSTRV--------RNARLAAQ-----------------------EAAEQATPAG--------------------AASTTAGRXXXXAGAPPLLPVSAMEPTAGWSRAEAATREAERR-------DEAVSEYLRQINWWFLVCFVLSSVWVSNGGTCAQTAPHLYRLAVALTVIYYALLFLPLACFCLIVCCLPLFIVLYRLALPYAEREWRRARSADATQLAALPSTPYTPGMLSSAAXXXXXXXXXXXXXXXXXXXXXXXXEATCVICLCEYVAGELVTSLPCRHHFHKKCIDEWLATDKSCPLCKQDIDA 1385          
BLAST of Ggra7991.t1 vs. uniprot
Match: A0A7S1TI96 (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1TI96_9RHOD)

HSP 1 Score: 239 bits (609), Expect = 1.070e-70
Identity = 156/363 (42.98%), Postives = 202/363 (55.65%), Query Frame = 0
Query:   17 RLRSNVADQVQRDLLPAGRMLSVFLVLCELLAEFAVLAWSRGQTCKPPLRFWLLVLIVLQLTTVLLNCLNIYQRRAAMDSFRHHRNGLSSSELDMYADAPDAPVPPSPAPNDVVVQLMQQPSPASDPDSRPLLDADISYDEQQILAAVRQINHSPTARRLSPHIPQSPHHALSPSSSREFAQYEQQSEPPYNIVSSQFVDRFIRIVNLWYLAWFIIGSIWVSDGGTCSTEAPHLYRLIVALTIIYYALLFLPLACFCLIVCCLPLFILVYRIMLPYAERERRRARAADPAQVQNLNSITFSPETFTAHAGSDSLDDASCVICLCDYEDGEIVRFLPCKHHFHKDCVDVWLRLDKACCLCKQDI 379
            R R+NV D VQRDLLPAGR+LS+FLV+CEL+AE  VL  S  + C  PL  W+ +L++LQ+ TV+LN L I   R A  S      G +S      AD+P +  P           L    SPAS                      +R +N SP+   L+ ++          SS+ E A+  ++                 R++N +YL WFI+GSIWVS+  +C+  APHLYRL +ALTIIYY LL LPLACFCLI+CCLPLFI   RIMLPYAER +RR+RAA P Q+  L   TF  E          +++ +CVICL  Y DG+ +R LPCKHHFH  C+D WL   + C LCK+ I
Sbjct:  195 RARTNVVDHVQRDLLPAGRLLSIFLVVCELVAEGTVLTLSWSKPCARPLHLWIEILMLLQIATVVLNALCIVHGRQATLS------GPTSPSRPWDADSPGSGSP-----------LDSPRSPAS---------------------GLRLLN-SPSLESLANNL----------SSTTEGARLARRQ----------------RLLNAFYLIWFIVGSIWVSESSSCAKTAPHLYRLALALTIIYYTLLGLPLACFCLIMCCLPLFI---RIMLPYAERAQRRSRAATPEQIMALPVSTFPIEGL-------EVEEDNCVICLGSYVDGDSIRELPCKHHFHMKCIDQWLACSQQCPLCKKSI 482          
BLAST of Ggra7991.t1 vs. uniprot
Match: A0A5J4YII6 (E3 ubiquitin protein ligase RIE1 n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YII6_PORPP)

HSP 1 Score: 228 bits (581), Expect = 1.270e-67
Identity = 156/374 (41.71%), Postives = 210/374 (56.15%), Query Frame = 0
Query:   14 ESTRLRSNVADQVQRDLLPAGRMLSVFLVLCELLAEFAVLAWSRGQTCKPPLRFWLLVLIVLQLTTVLLNCLNIYQRRAAMDSFRHHRNGLSSSELDMYADAPDAPVPPSPAPNDVVVQLMQQPSPASDPDSRPL---LDADISYDEQQILAAVRQINHSPTARRLSPHIPQSPHHALSPSSSREFAQYEQQSEPPYNIVSSQFVDRFIRIVNLWYLAWFIIGSIWVSDGGTCSTEAPHLYRLIVALTIIYYALLFLPLACFCLIVCCLPLFILVYRIMLPYAERERRRARAADPAQVQNLNSITFSPETFTAHAGSDSLDDASCVICLCDYEDGEIVRFLPCKHHFHKDCVDVWLRLDKACCLCKQDIDAHNS 384
            +  +LRSNVA Q++RDL PA RMLS+FLV  E +AE+ VL     + C   L  W++VL+ +QL +V+L   +    R+A+D     R  L S       DA  AP   S AP+ V        +  S+    P+   + A  + D Q           SP   R           A S S+  E       +    + V+   + R+IRI+N  YLAWF+IGSIWVSDG +C+  APHLYRL++ LTIIYY+LL LPL CFCLI+CCLP+FI   R+MLPYAER +RR R A   Q+  L +  F+  +     GS+     SCVICL  Y D E ++ LPC+HHFH  C+D WL +DK+C LCK DID+H++
Sbjct:   68 QPVQLRSNVASQMRRDLTPAARMLSIFLVSFEFVAEYIVLYIDWDKPCDSFLHLWVVVLMAMQLCSVVLGLAS----RSALD-----RVVLISE------DASGAPR--STAPSVVFTAGGMGVATNSNISVGPVDASMPASFASDAQ-----------SPELSR-----------ATSWSTVAENLYGSDVNPTTSSSVNPDLILRWIRILNGLYLAWFLIGSIWVSDGASCAQTAPHLYRLVLVLTIIYYSLLGLPLFCFCLIMCCLPMFI---RLMLPYAERAQRRGRCASAEQIAALPTEAFNATSAPEMFGSEQ----SCVICLSAYADAERLKILPCRHHFHSKCIDEWLCVDKSCPLCKADIDSHDT 395          
BLAST of Ggra7991.t1 vs. uniprot
Match: A0A7S0BLF4 (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0BLF4_9RHOD)

HSP 1 Score: 150 bits (380), Expect = 1.010e-40
Identity = 82/163 (50.31%), Postives = 105/163 (64.42%), Query Frame = 0
Query:  219 IRIVNLWYLAWFIIGSIWVSDGGTCSTEAPHLYRLIVALTIIYYALLFLPLACFCLIVCCLPLFILVYRIMLPYAERERRRARAADPAQVQNLNSITFSPETFTAHAGSDSLDDASCVICLCDYEDGEIVRFLPCKHHFHKDCVDVWLRLDKACCLCKQDIDA 381
            +R+VN  YL  F IGS+ V+   +C    P LYRL++ALT+IYY LL LPLACFCL++C LP F     + L  +ER  R++R A   +++ L    F P+ F      DS  D SCVICL  YE GE +R LPCKH FH +CVD WL +DK+C LCKQDID+
Sbjct:    1 VRMVNALYLILFGIGSVLVTQARSCMKTDPDLYRLVLALTVIYYGLLGLPLACFCLMLCWLPGFFRFIPVYL--SERCNRQSRMASSKRIEELPRTDFDPDNF------DSNHDVSCVICLNPYERGEKLRTLPCKHDFHSECVDQWLLIDKSCPLCKQDIDS 155          
BLAST of Ggra7991.t1 vs. uniprot
Match: T0PUV8 (RING-type domain-containing protein n=2 Tax=Saprolegnia TaxID=4769 RepID=T0PUV8_SAPDV)

HSP 1 Score: 107 bits (268), Expect = 6.500e-23
Identity = 66/178 (37.08%), Postives = 98/178 (55.06%), Query Frame = 0
Query:  222 VNLWYLAWFIIGSIWV-SDGGTCSTEAP-HLYRLIVALTIIYYALLFLPLACFCLI-------VC-CLPLFILVYRIMLPYAERERRRARAADPAQVQNLNSITFSPETFTAHAGSDSLDDASCVICLCDYEDGEIVRFLPCKHHFHKDCVDVWLRLDKACCLCKQDIDAHNSSPASS 389
            + L  L WF++G++WV SD   CST+   H+Y + +A+ II Y  +FLP    CLI       VC CLP  I +   M     ++  R + A    +  L+S+ ++P  F         +DASC ICL +Y++ + VR L C HHFHK+CVD WL ++  C  C+  ID ++  PA+S
Sbjct:  142 MELMGLFWFLVGNMWVISDEDHCSTQGDGHMYNMALAMIIICYVKIFLP----CLILMALLPVVCFCLPCLIRILNRM-----QDPMRGKGASKEMIAALSSVPYTPHLFPD-------EDASCCICLNEYDESQHVRILHCNHHFHKECVDEWLLVNATCPTCRTSIDPNHVEPAAS 303          
BLAST of Ggra7991.t1 vs. uniprot
Match: A0A152A2A2 (Putative GATA-binding transcription factor n=1 Tax=Tieghemostelium lacteum TaxID=361077 RepID=A0A152A2A2_9MYCE)

HSP 1 Score: 108 bits (270), Expect = 2.300e-22
Identity = 66/202 (32.67%), Postives = 103/202 (50.99%), Query Frame = 0
Query:  201 QQSEPPYNIVSSQFVDRFIRIVNLWYLAWFIIGSIWV--SDGGTCSTEAPHLYRLIVALTIIYYALLFLPLACFCLIVCCLPLFIL----VYRIMLPYAER--------ERRRARAADPAQVQNLNSITFSPETFTAHAGSDSLDDASCVICLCDYEDGEIVRFLPCKHHFHKDCVDVWLRLDKACCLCKQDIDAHNSSPAS 388
            +Q+ P   +V  +F     +++ L+ ++WF+IGSIW+  SD   C  + P+LY  +  L +  +            I   + LF++    + RI+  Y +R             R A  A ++NL    +       H G  S +DASC ICLC+YE  + +R LPCKHHFH  CVD WL ++KAC  CK+D+ +++  P S
Sbjct:  261 EQTSPHITLVHFRF-KTIHKVLLLFLVSWFLIGSIWLLKSDDKQCYAKIPYLYGSVYILLLFEF------------IAMLVSLFVMGMNILLRIIKQYIQRMSPVNPIFPAEEPRGASDAMIRNLKVDRY-------HEGQFSKEDASCAICLCEYELNDRIRILPCKHHFHLSCVDRWLIINKACPFCKRDVASYSDFPKS 442          
BLAST of Ggra7991.t1 vs. uniprot
Match: hypothetical protein n=1 Tax=Acytostelium subglobosum LB1 TaxID=1410327 RepID=UPI000644E744 (hypothetical protein n=1 Tax=Acytostelium subglobosum LB1 TaxID=1410327 RepID=UPI000644E744)

HSP 1 Score: 105 bits (262), Expect = 3.790e-21
Identity = 61/185 (32.97%), Postives = 98/185 (52.97%), Query Frame = 0
Query:  200 EQQSEPPYNIVSSQFVDRFI-RIVNLWYLAWFIIGSIWV---SDGGTCSTEAPHLYRLIVALTIIYYALLFLPLACFCLIVCCLPLFILVYRIMLPYAERERRRARAADPAQVQNLNSITFSPETFTAHAGSDSLDDASCVICLCDYEDGEIVRFLPCKHHFHKDCVDVWLRLDKACCLCKQDID 380
            +    PP +++  QF+   + R+++ +Y+ WF++G IW         C + +P+L+ +  ++ II   +L      FC   CC  +F L+   +    E     +R A  A ++ L    F       H G    DD SC ICLC+Y++ + +R LPC+HHFH DCVD WL ++K+C  CK+DID
Sbjct:  278 DDNGNPPPSLLRKQFIFNTVHRMLSCFYITWFLVGIIWTFKARSSDKCPSSSPYLFWVTYSV-IITQIILASGAIMFC---CCSCMFSLMR--LGAGVEMAPPESRGATDAMIRKLTIKKF-------HTGLLEKDDCSCAICLCEYDEDDKIRILPCRHHFHLDCVDRWLVINKSCPFCKRDID 449          
The following BLAST results are available for this feature:
BLAST of Ggra7991.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IK851.290e-21076.90E3 ubiquitin-protein ligase n=1 Tax=Gracilariopsis... [more]
R7Q7W71.870e-10282.32RING-type domain-containing protein n=1 Tax=Chondr... [more]
M2XIL22.490e-7639.90Zinc finger (C3HC4-type RING finger) family protei... [more]
A0A1X6NVI33.060e-7442.01RING-type domain-containing protein n=1 Tax=Porphy... [more]
A0A7S1TI961.070e-7042.98Hypothetical protein n=1 Tax=Compsopogon caeruleus... [more]
A0A5J4YII61.270e-6741.71E3 ubiquitin protein ligase RIE1 n=1 Tax=Porphyrid... [more]
A0A7S0BLF41.010e-4050.31Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
T0PUV86.500e-2337.08RING-type domain-containing protein n=2 Tax=Saprol... [more]
A0A152A2A22.300e-2232.67Putative GATA-binding transcription factor n=1 Tax... [more]
hypothetical protein n=1 Tax=Acytostelium subglobosum LB1 TaxID=1410327 RepID=UPI000644E7443.790e-2132.97hypothetical protein n=1 Tax=Acytostelium subglobo... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 335..375
e-value: 2.5E-4
score: 30.4
IPR001841Zinc finger, RING-typePFAMPF13639zf-RING_2coord: 334..376
e-value: 9.3E-10
score: 38.7
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 335..376
score: 10.527129
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10Zinc/RING finger domain, C3HC4 (zinc finger)coord: 291..382
e-value: 3.8E-18
score: 66.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 108..148
NoneNo IPR availablePANTHERPTHR46225C3H4 TYPE ZINC FINGER PROTEINcoord: 37..379
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 67..88
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 290..391
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 259..289
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 89..220
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..36
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 221..239
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 37..55
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 240..258
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 56..66
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 328..381
NoneNo IPR availableTMHMMTMhelixcoord: 253..285
NoneNo IPR availableTMHMMTMhelixcoord: 221..238
NoneNo IPR availableTMHMMTMhelixcoord: 36..55
NoneNo IPR availableTMHMMTMhelixcoord: 65..87

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000073_piloncontigtig00000073_pilon:594021..595196 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra7991.t1Ggra7991.t1Gracilaria gracilis GNS1m malemRNAtig00000073_pilon 594021..595196 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra7991.t1 ID=Ggra7991.t1|Name=Ggra7991.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=392bp
MPPSTPRRRIFHVESTRLRSNVADQVQRDLLPAGRMLSVFLVLCELLAEF
AVLAWSRGQTCKPPLRFWLLVLIVLQLTTVLLNCLNIYQRRAAMDSFRHH
RNGLSSSELDMYADAPDAPVPPSPAPNDVVVQLMQQPSPASDPDSRPLLD
ADISYDEQQILAAVRQINHSPTARRLSPHIPQSPHHALSPSSSREFAQYE
QQSEPPYNIVSSQFVDRFIRIVNLWYLAWFIIGSIWVSDGGTCSTEAPHL
YRLIVALTIIYYALLFLPLACFCLIVCCLPLFILVYRIMLPYAERERRRA
RAADPAQVQNLNSITFSPETFTAHAGSDSLDDASCVICLCDYEDGEIVRF
LPCKHHFHKDCVDVWLRLDKACCLCKQDIDAHNSSPASSPV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001841Znf_RING
IPR013083Znf_RING/FYVE/PHD