Ggra7988.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra7988.t1
Unique NameGgra7988.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length207
Homology
BLAST of Ggra7988.t1 vs. uniprot
Match: A0A2V3IHJ3 (Mitochondrial inner membrane protease subunit n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IHJ3_9FLOR)

HSP 1 Score: 358 bits (919), Expect = 2.930e-124
Identity = 166/205 (80.98%), Postives = 187/205 (91.22%), Query Frame = 0
Query:    2 PEQRDSEVKQVADAIPPLQKQKKPWFRRILEDDQFDDLRTFTMAFLVALFVRSTMIEPRYIPSLSMYPTFDVGDQFLVDKLSRLVRPPHENDIVVFEPPPSLRERGYKKSDAFIKRVIARGGDSVHIYGGRVEVNGVPREEQFIKESPNYEWGPGIVPEGFVMVLGDNRNNSYDSHVWGFLPEHNIIGRALVRYWPPTRFGTTFF 206
            PEQ++ +  ++ D  P +Q+ KKPW++R+ EDDQFDD+RTFT AFLVALFVRSTM+EPRYIPSLSMYPTF+VGDQFLVDKLSR+VRPPHENDIVVFEPP  LRERGYKKSDAFIKRV+A GGD V+I+ GRVEVNG+PREE F+ E+PNYEWGPG VPEG+VMVLGDNRNNSYDSHVWGFLPEHNIIGRALVRYWPPTRFGTTFF
Sbjct:    5 PEQQEQQDLELKDN-PSVQEPKKPWYKRLFEDDQFDDVRTFTFAFLVALFVRSTMVEPRYIPSLSMYPTFEVGDQFLVDKLSRIVRPPHENDIVVFEPPTVLRERGYKKSDAFIKRVVAVGGDRVYIHNGRVEVNGIPREENFVNENPNYEWGPGTVPEGYVMVLGDNRNNSYDSHVWGFLPEHNIIGRALVRYWPPTRFGTTFF 208          
BLAST of Ggra7988.t1 vs. uniprot
Match: R7Q6Y8 (Mitochondrial inner membrane protease subunit n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q6Y8_CHOCR)

HSP 1 Score: 295 bits (755), Expect = 1.590e-98
Identity = 134/183 (73.22%), Postives = 154/183 (84.15%), Query Frame = 0
Query:   24 KPWFRRILEDDQFDDLRTFTMAFLVALFVRSTMIEPRYIPSLSMYPTFDVGDQFLVDKLSRLVRPPHENDIVVFEPPPSLRERGYKKSDAFIKRVIARGGDSVHIYGGRVEVNGVPREEQFIKESPNYEWGPGIVPEGFVMVLGDNRNNSYDSHVWGFLPEHNIIGRALVRYWPPTRFGTTFF 206
            + WF R+L DDQFDDLRTFTMAF VAL VR  ++EPRYIPSLSM+PTFD+GDQFLVDK+S+ VR     D+VVFEPP +L+ERGY+K DAFIKR++ARGGD V I GG V VN + REE FIKE PNYEWGPG VP GFVMVLGDNRNNSYDSH+WGFLPE NIIG+A+VRYWPP R GT+F+
Sbjct:   76 RSWFSRVLNDDQFDDLRTFTMAFAVALLVRGFVVEPRYIPSLSMFPTFDIGDQFLVDKVSKYVRSAETGDVVVFEPPQALKERGYRKKDAFIKRIVARGGDIVRITGGEVYVNDLRREEPFIKEHPNYEWGPGEVPAGFVMVLGDNRNNSYDSHIWGFLPEENIIGKAMVRYWPPARVGTSFY 258          
BLAST of Ggra7988.t1 vs. uniprot
Match: A0A5J4YQ87 (Mitochondrial inner membrane protease subunit n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YQ87_PORPP)

HSP 1 Score: 241 bits (616), Expect = 2.550e-76
Identity = 115/188 (61.17%), Postives = 143/188 (76.06%), Query Frame = 0
Query:   16 IPPLQKQKKPWF-RRILEDDQFDDLRTFTMAFLVALFVRSTMIEPRYIPSLSMYPTFDVGDQFLVDKLSRLVRPPHENDIVVFEPPPSLRERGYKKSDAFIKRVIARGGDSVHIYGGRVEVNGVPREEQFIKESPNYEWGPGIVPEGFVMVLGDNRNNSYDSHVWGFLPEHNIIGRALVRYWPPTRFG 202
            +PP    K P F +++L+D +FDDLRTF  +FLVAL  R  + EPRYIPSLSM+PTF+VGDQ  V+K+SRLVRP    DIVVFEPP +L + GYKKSDAFIKR++A  GD V ++ G + +NG  ++E +I E P YEWGP  VPEG VMVLGDNRNNS+DSH+WGFLP  N+IGRA++ YWP  RFG
Sbjct:  152 VPPA---KSPSFLQQLLKDPKFDDLRTFGASFLVALMFRQFVAEPRYIPSLSMFPTFEVGDQLAVEKVSRLVRPLQRGDIVVFEPPTALTDNGYKKSDAFIKRIVAVAGDFVQVHDGTLFINGQAQDESYINEHPRYEWGPTAVPEGQVMVLGDNRNNSFDSHLWGFLPIKNVIGRAVLTYWPLDRFG 336          
BLAST of Ggra7988.t1 vs. uniprot
Match: M1UNG9 (Mitochondrial inner membrane protease subunit n=1 Tax=Cyanidioschyzon merolae (strain 10D) TaxID=280699 RepID=M1UNG9_CYAM1)

HSP 1 Score: 223 bits (569), Expect = 2.830e-69
Identity = 111/204 (54.41%), Postives = 143/204 (70.10%), Query Frame = 0
Query:   18 PLQKQKKPWFRRILEDDQFDDLRTFTMAFLVALFVRSTMIEPRYIPSLSMYPTFDVGDQFLVDKLS-RLVRPPHENDIVVFEPPPSLRERG-----------------YKKSDAFIKRVIARGGDSVHIYGGRVEVNGVPREEQFIKESPNYEWGPGIVPEGFVMVLGDNRNNSYDSHVWGFLPEHNIIGRALVRYWPPTRFGT 203
            P+ +Q + W++R+  DD+F D+R FT +FL A+F+R+ ++EPRYIPSLSMYPTFDVGDQ LVDK++ +L R     D+VVF PPP+L E                   Y   DA IKRV+A GGD V I  GR+ VNG  + E +I ESP+Y+WGP  VP+G+++VLGDNR+NS DSHVWGFLPE N+IGRA+ RYWP TR GT
Sbjct:  130 PVVQQWQVWWQRLWRDDKFADVRVFTASFLAAVFIRAFVVEPRYIPSLSMYPTFDVGDQLLVDKVTLKLGRHIQRGDVVVFYPPPALIEASKETAKALNAAGETGAHQYGARDAMIKRVVALGGDVVEIRDGRLYVNGEAQIETYIAESPDYQWGPVQVPDGYLVVLGDNRSNSLDSHVWGFLPERNVIGRAVFRYWPLTRVGT 333          
BLAST of Ggra7988.t1 vs. uniprot
Match: A0A835M6A9 (Peptidase_S26 domain-containing protein n=1 Tax=Coptis chinensis TaxID=261450 RepID=A0A835M6A9_9MAGN)

HSP 1 Score: 211 bits (538), Expect = 4.970e-65
Identity = 99/168 (58.93%), Postives = 125/168 (74.40%), Query Frame = 0
Query:   37 DDLRTFTMAFLVALFVRSTMIEPRYIPSLSMYPTFDVGDQFLVDKLSRLVRPPHENDIVVFEPPPSLRERGYKKSDAFIKRVIARGGDSVHIYGGRVEVNGVPREEQFIKESPNYEWGPGIVPEGFVMVLGDNRNNSYDSHVWGFLPEHNIIGRALVRYWPPTRFGTT 204
            DD  T  +A  V+L  RS + EPR+IPSLSMYPTFDVGD+ + +K+S   R P  NDIV+F+ PP L+E GY  SD FIKR++A+ GD V ++ G++ VNGV R+E FI ESP+Y+  P  VPE FV V+GDNRNNSYDSH+WG LP  NIIGR++ RYWPPTR G+T
Sbjct:  109 DDAITVFLALAVSLAFRSFIAEPRFIPSLSMYPTFDVGDRIVAEKVSYYFRKPCPNDIVIFKSPPVLQEVGYTDSDVFIKRIVAKEGDVVEVHNGKLMVNGVDRDESFILESPSYDMTPIRVPENFVFVMGDNRNNSYDSHIWGPLPAKNIIGRSIFRYWPPTRIGST 276          
BLAST of Ggra7988.t1 vs. uniprot
Match: Signal peptidase I n=1 Tax=Cyanobacteria bacterium SBC TaxID=2821503 RepID=UPI000A67577B (Signal peptidase I n=1 Tax=Cyanobacteria bacterium SBC TaxID=2821503 RepID=UPI000A67577B)

HSP 1 Score: 207 bits (527), Expect = 8.850e-65
Identity = 93/171 (54.39%), Postives = 122/171 (71.35%), Query Frame = 0
Query:   34 DQFDDLRTFTMAFLVALFVRSTMIEPRYIPSLSMYPTFDVGDQFLVDKLSRLVRPPHENDIVVFEPPPSLRERGYKKSDAFIKRVIARGGDSVHIYGGRVEVNGVPREEQFIKESPNYEWGPGIVPEGFVMVLGDNRNNSYDSHVWGFLPEHNIIGRALVRYWPPTRFGTT 204
            D  +++R F +A ++AL +R+ + EPRYIPS SM+PT ++GD+ +V+K+S    PP   DI+VF PPP L+ +GY+   AFIKRVIAR GD+V +  G+V VNG P  E +I E P Y WGP  VP G + V+GDNRNNS DSHVWGFLPE N IGRA  R+WP +R G+T
Sbjct:   20 DHGENIRIFAVALVLALLLRTFIAEPRYIPSESMFPTLELGDRLIVEKISYYFHPPEPGDIIVFSPPPQLQRQGYRADQAFIKRVIARSGDTVAVNDGQVYVNGQPLRENYIAEVPEYAWGPATVPPGSIFVMGDNRNNSNDSHVWGFLPEENTIGRAWFRFWPLSRLGST 190          
BLAST of Ggra7988.t1 vs. uniprot
Match: A0A4Y7KUF9 (Peptidase_S26 domain-containing protein n=2 Tax=Papaver somniferum TaxID=3469 RepID=A0A4Y7KUF9_PAPSO)

HSP 1 Score: 211 bits (537), Expect = 1.590e-64
Identity = 98/168 (58.33%), Postives = 125/168 (74.40%), Query Frame = 0
Query:   37 DDLRTFTMAFLVALFVRSTMIEPRYIPSLSMYPTFDVGDQFLVDKLSRLVRPPHENDIVVFEPPPSLRERGYKKSDAFIKRVIARGGDSVHIYGGRVEVNGVPREEQFIKESPNYEWGPGIVPEGFVMVLGDNRNNSYDSHVWGFLPEHNIIGRALVRYWPPTRFGTT 204
            DD +T   AF V+L  RS + EPR+IPSLSMYPTFDVGD+ + +K+S   R P  ND+V+F+ PP L++ GY  SD FIKR++A+ GD V ++ G++ VNGV R+E+FI E P+Y+  P  VPE  V V+GDNRNNSYDSHVWG LPE NIIGR++ RYWPPTR G T
Sbjct:  123 DDAKTVFAAFAVSLAFRSFIAEPRFIPSLSMYPTFDVGDRLVAEKVSYYFRKPCPNDVVIFKSPPVLQQVGYTDSDVFIKRIVAKEGDVVEVHDGKLIVNGVARDEEFILEPPSYDMSPVTVPENSVFVMGDNRNNSYDSHVWGPLPEKNIIGRSVFRYWPPTRIGGT 290          
BLAST of Ggra7988.t1 vs. uniprot
Match: A0A2R6W794 (Peptidase_S26 domain-containing protein n=2 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A2R6W794_MARPO)

HSP 1 Score: 214 bits (545), Expect = 2.310e-64
Identity = 95/168 (56.55%), Postives = 125/168 (74.40%), Query Frame = 0
Query:   37 DDLRTFTMAFLVALFVRSTMIEPRYIPSLSMYPTFDVGDQFLVDKLSRLVRPPHENDIVVFEPPPSLRERGYKKSDAFIKRVIARGGDSVHIYGGRVEVNGVPREEQFIKESPNYEWGPGIVPEGFVMVLGDNRNNSYDSHVWGFLPEHNIIGRALVRYWPPTRFGTT 204
            DD +T   AF  +L  R  + EPRYIPSLSMYPTF++GD+ + +K+S   R P  NDIV+F+ PPSL+++GY   + FIKR++ARGGD V ++ G++ VNG P +E FI E P YE  P IVP+G V V+GDNRNNSYDSH+WG LP  NI+GR++VRYWPP+R G+T
Sbjct:  256 DDGKTIIAAFAASLLFRWFIAEPRYIPSLSMYPTFEIGDRIIAEKVSYYFRKPGVNDIVIFKAPPSLQQKGYSAGEVFIKRIVARGGDRVEVHDGKLVVNGTPVDEDFIAEEPAYELNPYIVPQGHVFVMGDNRNNSYDSHIWGSLPLENILGRSVVRYWPPSRLGST 423          
BLAST of Ggra7988.t1 vs. uniprot
Match: A0A251V6G0 (Putative peptidase S26A, signal peptidase I n=1 Tax=Helianthus annuus TaxID=4232 RepID=A0A251V6G0_HELAN)

HSP 1 Score: 209 bits (531), Expect = 3.120e-64
Identity = 95/172 (55.23%), Postives = 124/172 (72.09%), Query Frame = 0
Query:   33 DDQFDDLRTFTMAFLVALFVRSTMIEPRYIPSLSMYPTFDVGDQFLVDKLSRLVRPPHENDIVVFEPPPSLRERGYKKSDAFIKRVIARGGDSVHIYGGRVEVNGVPREEQFIKESPNYEWGPGIVPEGFVMVLGDNRNNSYDSHVWGFLPEHNIIGRALVRYWPPTRFGTT 204
            D   DD++T  +A  V+L  R+ + EPR+IPSLSMYPTFDVGD+ + +K+S   R P  NDIV+F+ PP L++ GY   D FIKR++A+ GD V ++ G++ VNGV R E F  E+P YE  P  VPE +V V+GDNRNNSYDSHVWG LP  NIIGR+++RYWPP R G+T
Sbjct:   81 DFSLDDVKTVVVAVAVSLAFRAFIAEPRFIPSLSMYPTFDVGDRIVAEKVSYYFRKPCPNDIVIFKSPPVLQKAGYTDDDVFIKRIVAKAGDVVEVHNGKLIVNGVVRNEDFTYEAPKYEMNPVRVPENYVFVMGDNRNNSYDSHVWGSLPSKNIIGRSVLRYWPPARIGST 252          
BLAST of Ggra7988.t1 vs. uniprot
Match: A0A7J7IBZ0 (Mitochondrial inner membrane protease subunit n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7IBZ0_9RHOD)

HSP 1 Score: 207 bits (527), Expect = 4.180e-64
Identity = 103/209 (49.28%), Postives = 136/209 (65.07%), Query Frame = 0
Query:   12 VADAIPPLQKQKKPWFRRILEDDQFDDLRTFTMAFLVALFVRSTMIEPRYIPSLSMYPTFDVGDQFLVDKLS-RLVRPPHENDIVVFEPPPSLRERG-----------------YKKSDAFIKRVIARGGDSVHIYGGRVEVNGVPREEQFIKESPNYEWGPGIVPEGFVMVLGDNRNNSYDSHVWGFLPEHNIIGRALVRYWPPTRFG 202
            VA    P +++ + W+ R+L D+QF D+R FT +F  A+ +R  +IEPRYIPSLSM+PTF++GDQ  VDK + +L R     D+VVF PPP+L E                   Y   DA IKRV+A  GD+V +  GR+ VNG  + E ++ E P+Y WGP  VPEG ++VLGDNR+NS DSH+WGFLPE N+IGRA+ RYWP TR G
Sbjct:   34 VAPVPVPFRERWRRWWHRLLYDEQFSDVRVFTASFAAAVLLRVFVIEPRYIPSLSMFPTFEIGDQLFVDKATQKLGRHIERGDVVVFYPPPALIEASKMTAQALNAAGEKDVHQYGAKDAMIKRVVAVAGDTVAVRDGRLYVNGEAQIEPYVTEQPDYRWGPVQVPEGCLVVLGDNRSNSLDSHIWGFLPERNVIGRAVFRYWPITRMG 242          
The following BLAST results are available for this feature:
BLAST of Ggra7988.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IHJ32.930e-12480.98Mitochondrial inner membrane protease subunit n=1 ... [more]
R7Q6Y81.590e-9873.22Mitochondrial inner membrane protease subunit n=1 ... [more]
A0A5J4YQ872.550e-7661.17Mitochondrial inner membrane protease subunit n=1 ... [more]
M1UNG92.830e-6954.41Mitochondrial inner membrane protease subunit n=1 ... [more]
A0A835M6A94.970e-6558.93Peptidase_S26 domain-containing protein n=1 Tax=Co... [more]
Signal peptidase I n=1 Tax=Cyanobacteria bacterium SBC TaxID=2821503 RepID=UPI000A67577B8.850e-6554.39Signal peptidase I n=1 Tax=Cyanobacteria bacterium... [more]
A0A4Y7KUF91.590e-6458.33Peptidase_S26 domain-containing protein n=2 Tax=Pa... [more]
A0A2R6W7942.310e-6456.55Peptidase_S26 domain-containing protein n=2 Tax=Ma... [more]
A0A251V6G03.120e-6455.23Putative peptidase S26A, signal peptidase I n=1 Ta... [more]
A0A7J7IBZ04.180e-6449.28Mitochondrial inner membrane protease subunit n=1 ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000223Peptidase S26A, signal peptidase IPRINTSPR00727LEADERPTASEcoord: 114..126
score: 51.47
coord: 55..71
score: 39.22
coord: 158..177
score: 56.67
IPR000223Peptidase S26A, signal peptidase ITIGRFAMTIGR02227TIGR02227coord: 40..197
e-value: 2.6E-36
score: 122.9
IPR000223Peptidase S26A, signal peptidase IPANTHERPTHR43390SIGNAL PEPTIDASE Icoord: 19..202
NoneNo IPR availableGENE3D2.10.109.10Umud Fragment, subunit Acoord: 51..204
e-value: 7.0E-34
score: 118.5
NoneNo IPR availablePANTHERPTHR43390:SF2THYLAKOIDAL PROCESSING PEPTIDASE 2, CHLOROPLASTIC-RELATEDcoord: 19..202
IPR019533Peptidase S26PFAMPF10502Peptidase_S26coord: 40..196
e-value: 4.6E-40
score: 137.3
IPR019533Peptidase S26CDDcd06530S26_SPase_Icoord: 58..191
e-value: 1.03758E-23
score: 88.0263
IPR019758Peptidase S26A, signal peptidase I, conserved sitePROSITEPS00761SPASE_I_3coord: 163..176
IPR019757Peptidase S26A, signal peptidase I, lysine active sitePROSITEPS00760SPASE_I_2coord: 116..128
IPR019756Peptidase S26A, signal peptidase I, serine active sitePROSITEPS00501SPASE_I_1coord: 64..71
IPR036286LexA/Signal peptidase-like superfamilySUPERFAMILY51306LexA/Signal peptidasecoord: 53..204

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000073_piloncontigtig00000073_pilon:589589..590209 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra7988.t1Ggra7988.t1Gracilaria gracilis GNS1m malemRNAtig00000073_pilon 589589..590209 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra7988.t1 ID=Ggra7988.t1|Name=Ggra7988.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=207bp
MPEQRDSEVKQVADAIPPLQKQKKPWFRRILEDDQFDDLRTFTMAFLVAL
FVRSTMIEPRYIPSLSMYPTFDVGDQFLVDKLSRLVRPPHENDIVVFEPP
PSLRERGYKKSDAFIKRVIARGGDSVHIYGGRVEVNGVPREEQFIKESPN
YEWGPGIVPEGFVMVLGDNRNNSYDSHVWGFLPEHNIIGRALVRYWPPTR
FGTTFF*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000223Pept_S26A_signal_pept_1
IPR019533Peptidase_S26
IPR019758Pept_S26A_signal_pept_1_CS
IPR019757Pept_S26A_signal_pept_1_Lys-AS
IPR019756Pept_S26A_signal_pept_1_Ser-AS
IPR036286LexA/Signal_pep-like_sf