Ggra7982.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra7982.t1
Unique NameGgra7982.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length192
Homology
BLAST of Ggra7982.t1 vs. uniprot
Match: A0A2V3IHF3 (Chromophore lyase CpcS/CpeS 3 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IHF3_9FLOR)

HSP 1 Score: 295 bits (756), Expect = 2.320e-99
Identity = 149/191 (78.01%), Postives = 169/191 (88.48%), Query Frame = 0
Query:    1 MVAEPAARVPFSTMGMTVDDFFQRSIGVWRSQRSSHILAFAQFEAITSEISIEQLSIDDQRTKDLASLHNVSLDDIAIAIYMSWEGESDWDDDTEGDLSGQTVLAVTKDSDKRGKLLRSSGYAETIPAIGEWHMTDDGVFVLETPYEAAAAEERIWFATKDLRMRVSQIRTSSGAGVISASLSTEIRRLNL 191
            MVAE ++ V FST GMTV++FF+RS G+WRSQRSSHILAFAQFEAITSEISIE +S+ D+R K LA+ H+V   +IAI I+M WEGESDWDDDTEG LSG+T LAVTK S+K GKLLRSSGYAE+IPA+GEWHMTD GVFVLET YEAAAAEERIWFATKDLR+RVSQIRTSSGAGV+SAS+STEIRRL L
Sbjct:   40 MVAETSSPVAFSTAGMTVEEFFERSSGLWRSQRSSHILAFAQFEAITSEISIESVSVSDERIKALAAQHDVPQGEIAIGIHMRWEGESDWDDDTEGPLSGETTLAVTKGSEKSGKLLRSSGYAESIPAVGEWHMTDGGVFVLETLYEAAAAEERIWFATKDLRIRVSQIRTSSGAGVVSASMSTEIRRLKL 230          
BLAST of Ggra7982.t1 vs. uniprot
Match: R7Q9S3 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q9S3_CHOCR)

HSP 1 Score: 215 bits (548), Expect = 1.540e-68
Identity = 107/174 (61.49%), Postives = 136/174 (78.16%), Query Frame = 0
Query:   16 MTVDDFFQRSIGVWRSQRSSHILAFAQFEAITSEISIEQLSIDDQRTKDLASLHNVSLDDIAIAIYMSWEGESDWDDDTEGDLSGQTVLAVTKDSDKRGKLLRSSGYAETIPAIGEWHMTDDGVFVLETPYEAAAAEERIWFATKDLRMRVSQIRTSSGAGVISASLSTEIRRL 189
            MTVD+FF++S+G W SQRSSH LA+AQFEAITS+I+I + + +D     L   H +++++  ++I MSWEGESDWD+D    + G  V++V KD    G+LLRS GYAETIPA+G+W MT+DGVFVL T YEAAAAEERIWFAT +LRMRVS IRTSSG GV++AS STEIR+L
Sbjct:    1 MTVDEFFEKSVGEWSSQRSSHNLAWAQFEAITSDITITKKTANDDEVVSLCRQHEIAVEETDVSIAMSWEGESDWDEDEV--MEGTAVMSVVKDGPANGRLLRSVGYAETIPAVGKWEMTEDGVFVLHTFYEAAAAEERIWFATPNLRMRVSLIRTSSGNGVVTASFSTEIRKL 172          
BLAST of Ggra7982.t1 vs. uniprot
Match: A0A7S1ET48 (Hypothetical protein n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S1ET48_9RHOD)

HSP 1 Score: 216 bits (551), Expect = 9.990e-68
Identity = 110/181 (60.77%), Postives = 134/181 (74.03%), Query Frame = 0
Query:   11 FSTMGMTVDDFFQRSIGVWRSQRSSHILAFAQFEAITSEISIEQLSIDDQRTKDLASLHNVSLDDIAIAIYMSWEGESDWDDDTEGDLSGQTVLAVTKDS---DKRGKLLRSSGYAETIPAIGEWHMTDDGVFVLETPYEAAAAEERIWFATKDLRMRVSQIRTSSGAGVISASLSTEIRR 188
            FS   MTV DFF RSIG W+SQRSSH LA+A FE++ S+I IE LS+ D    ++   ++ ++D    AI MSWEG SDWD+D    L G TVL V K+    DK GKLLRS GYAETIPA+GEW MT+DGVF+L T Y+ AAAEERIWFATKDLRMRVS I+TS+G GV++AS S+EIR+
Sbjct:   79 FSAWNMTVSDFFSRSIGTWKSQRSSHNLAWAHFESVNSDIVIESLSLSDSEVIEICEKYDTAMDSALCAIRMSWEGTSDWDEDEV--LKGSTVLVVVKNEQGGDKEGKLLRSEGYAETIPAVGEWKMTEDGVFILNTFYDRAAAEERIWFATKDLRMRVSMIKTSAGTGVLNASFSSEIRQ 257          
BLAST of Ggra7982.t1 vs. uniprot
Match: A0A5J4YKK7 (Chromophore lyase CpcS/CpeS 3 n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YKK7_PORPP)

HSP 1 Score: 214 bits (546), Expect = 5.890e-67
Identity = 108/182 (59.34%), Postives = 132/182 (72.53%), Query Frame = 0
Query:    7 ARVPFSTMGMTVDDFFQRSIGVWRSQRSSHILAFAQFEAITSEISIEQLSIDDQRTKDLASLHNVSLDDIAIAIYMSWEGESDWDDDTEGDLSGQTVLAVTKDSDKRGKLLRSSGYAETIPAIGEWHMTDDGVFVLETPYEAAAAEERIWFATKDLRMRVSQIRTSSGAGVISASLSTEIRR 188
            A+ PFS  GM V++FFQRSIG WRSQRSSH L + QFE + SEI IE ++ +D+  K +   +    D IA+AI MSWEG SDWD+D    L G TVL V KDS+  G+LLRS GYAE IPA+G+W M  DGVFVL+T Y+ A AEERIWFAT DLRMRVS I+T+   GV++AS S+EIRR
Sbjct:   82 AQPPFSARGMGVEEFFQRSIGEWRSQRSSHNLLWQQFEQVESEIVIENVTAEDEEVKGVCEQYKADADSIALAIRMSWEGTSDWDEDEV--LKGSTVLVVLKDSETSGRLLRSVGYAEEIPAVGQWRMETDGVFVLDTSYDRAGAEERIWFATPDLRMRVSMIKTAGNTGVLTASFSSEIRR 261          
BLAST of Ggra7982.t1 vs. uniprot
Match: A0A7S1XFR2 (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1XFR2_9RHOD)

HSP 1 Score: 202 bits (513), Expect = 2.390e-62
Identity = 106/186 (56.99%), Postives = 130/186 (69.89%), Query Frame = 0
Query:    4 EPAARVPFSTMGMTVDDFFQRSIGVWRSQRSSHILAFAQFEAITSEISIEQLSIDDQRTKDLASLHNVSLDDIAIAIYMSWEGESDWDDDTEGDLSGQTVLAVTKDSDKRGKLLRSSGYAETIPAIGEWHMTDDGVFVLETPYEAAAAEERIWFATKDLRMRVSQIRTSSGAGVISASLSTEIRRL 189
            E  A   +S  GMTV+ FF +S+G W+SQRSSH LAF+ FE I SE+ IE +   D   +++ + +      I I+I MSWEGESDWD++ E  L G TVL V KDS   G+LLRS GYAETIPAIG+W M DDG FVL TPY+ A+AEERIWFA  DLR+RVS IRT  G GV +AS S+EIRR+
Sbjct:   54 EAVAFQVYSPAGMTVEGFFDKSLGRWQSQRSSHNLAFSHFEEIRSELVIESVDAQDDAVQNICATYGEDPATIDISIRMSWEGESDWDENEE--LKGSTVLVVIKDSPTSGRLLRSEGYAETIPAIGQWTMQDDGCFVLLTPYDRASAEERIWFAGPDLRLRVSLIRTQLGRGVATASFSSEIRRI 237          
BLAST of Ggra7982.t1 vs. uniprot
Match: L1JFC7 (Putative phycoerythrin lyase n=3 Tax=Guillardia theta TaxID=55529 RepID=L1JFC7_GUITC)

HSP 1 Score: 197 bits (502), Expect = 1.810e-60
Identity = 97/177 (54.80%), Postives = 127/177 (71.75%), Query Frame = 0
Query:   11 FSTMGMTVDDFFQRSIGVWRSQRSSHILAFAQFEAITSEISIEQLSIDDQRTKDLASLHNVSLDDIAIAIYMSWEGESDWDDDTEGDLSGQTVLAVTKDSDKRGKLLRSSGYAETIPAIGEWHMTDDGVFVLETPYEAAAAEERIWFATKDLRMRVSQIRTSSGAGVISASLSTEIR 187
            ++  GM+V++FF+RS+G WRS RSSH +AFAQ E + S+I I Q++ DD    D+   +N   +    +I MSWEG SDWD++    + G TVL + KD +++GKLLRS GY ETIPA+GEW M +DG FVL T Y+ AAAEERIWFAT DLRMR S I+T  G GV++ASLSTE+R
Sbjct:   75 WTAAGMSVEEFFERSVGSWRSLRSSHNIAFAQLEEVNSDIDITQVAADDSEFLDICKTYNFEPEKACSSIRMSWEGSSDWDENEV--IKGSTVLVLYKDEERKGKLLRSVGYTETIPAVGEWTMQEDGTFVLHTFYDRAAAEERIWFATPDLRMRCSIIKTQHGKGVLTASLSTEVR 249          
BLAST of Ggra7982.t1 vs. uniprot
Match: Putative phycoerythrin lyase n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=UPI0004E5BCA6 (Putative phycoerythrin lyase n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=UPI0004E5BCA6)

HSP 1 Score: 195 bits (495), Expect = 2.820e-60
Identity = 96/172 (55.81%), Postives = 124/172 (72.09%), Query Frame = 0
Query:   16 MTVDDFFQRSIGVWRSQRSSHILAFAQFEAITSEISIEQLSIDDQRTKDLASLHNVSLDDIAIAIYMSWEGESDWDDDTEGDLSGQTVLAVTKDSDKRGKLLRSSGYAETIPAIGEWHMTDDGVFVLETPYEAAAAEERIWFATKDLRMRVSQIRTSSGAGVISASLSTEIR 187
            M+V++FF+RS+G WRS RSSH +AFAQ E + S+I I Q++ DD    D+   +N   +    +I MSWEG SDWD++    + G TVL + KD +++GKLLRS GY ETIPA+GEW M +DG FVL T Y+ AAAEERIWFAT DLRMR S I+T  G GV++ASLSTE+R
Sbjct:   16 MSVEEFFERSVGSWRSLRSSHNIAFAQLEEVNSDIDITQVAADDSEFLDICKTYNFEPEKACSSIRMSWEGSSDWDENEV--IKGSTVLVLYKDEERKGKLLRSVGYTETIPAVGEWTMQEDGTFVLHTFYDRAAAEERIWFATPDLRMRCSIIKTQHGKGVLTASLSTEVR 185          
BLAST of Ggra7982.t1 vs. uniprot
Match: A0A7S2ZUG7 (Hypothetical protein n=2 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZUG7_9RHOD)

HSP 1 Score: 196 bits (497), Expect = 6.130e-60
Identity = 100/185 (54.05%), Postives = 125/185 (67.57%), Query Frame = 0
Query:    5 PAARVPFSTMGMTVDDFFQRSIGVWRSQRSSHILAFAQFEAITSEISIEQLSIDDQRTKDLASLHNVSLDDIAIAIYMSWEGESDWDDDTEGDLSGQTVLAVTKDSDKRGKLLRSSGYAETIPAIGEWHMTDDGVFVLETPYEAAAAEERIWFATKDLRMRVSQIRTSSGAGVISASLSTEIRRL 189
            P     +ST GMTV+DFF+ SIG WRS RSSH LA +  E + SEI IE + +  +    +   +       A AI MSWEG SDWD+D    L G T+L + KD D +G+LLRS GYAET+PA+GEW M  DG FVL TPYE A+AEERIWF T ++R+RVS IRT +G GV++AS+STEIR L
Sbjct:   54 PVQTGVYSTAGMTVEDFFKNSIGSWRSMRSSHNLAMSFMEEVNSEIEIEPVELAHESVLAICKQYETDPATAATAIKMSWEGTSDWDEDEV--LEGSTLLVLVKDEDAKGRLLRSEGYAETVPAVGEWSMEADGTFVLITPYERASAEERIWFTTPNMRVRVSFIRTQTGEGVLTASMSTEIREL 236          
BLAST of Ggra7982.t1 vs. uniprot
Match: A0A1Z4L9A9 (Chromophore lyase CpcS/CpeS n=6 Tax=Nostoc TaxID=1177 RepID=A0A1Z4L9A9_NOSLI)

HSP 1 Score: 190 bits (483), Expect = 1.310e-58
Identity = 99/177 (55.93%), Postives = 123/177 (69.49%), Query Frame = 0
Query:   16 MTVDDFFQRSIGVWRSQRSSHILAFAQFEAITSEISIEQLSIDDQRTKDLASLHNVSLDDIAIAIYMSWEGESDWDDDTEGDLSGQTVLAVTKDSDK--RGKLLRSSGYAETIPAIGEWHMTDDGVFVLETPYEAAAAEERIWFATKDLRMRVSQIRTSSGAGVISASLSTEIRRLN 190
            M + +FF+ SIG WRSQRS H LAFA FE + S I IE LS DD   +++  L++VS  DI     M+WEGESDWDD     +SG TVL    D +   +GKLLR  GYAETIPA+G++H++DDGVF L T Y+ AAAEERIWFA  +LR RVS I+TS G GV +AS S+EIR L+
Sbjct:    1 MKITEFFELSIGRWRSQRSGHHLAFAHFEEVLSTIDIESLSTDDPAVREICKLYDVSTSDITHPFRMTWEGESDWDDKP---ISGSTVLVPIPDIENPSKGKLLREKGYAETIPAVGKYHLSDDGVFTLLTQYDLAAAEERIWFANPNLRFRVSMIKTSDGKGVTTASFSSEIRSLS 174          
BLAST of Ggra7982.t1 vs. uniprot
Match: A0A1U7H294 (Chromophore lyase CpcS/CpeS n=2 Tax=Nostocaceae TaxID=1162 RepID=A0A1U7H294_9NOSO)

HSP 1 Score: 186 bits (471), Expect = 8.680e-57
Identity = 96/177 (54.24%), Postives = 120/177 (67.80%), Query Frame = 0
Query:   16 MTVDDFFQRSIGVWRSQRSSHILAFAQFEAITSEISIEQLSIDDQRTKDLASLHNVSLDDIAIAIYMSWEGESDWDDDTEGDLSGQTVLAVTKDSDK--RGKLLRSSGYAETIPAIGEWHMTDDGVFVLETPYEAAAAEERIWFATKDLRMRVSQIRTSSGAGVISASLSTEIRRLN 190
            M +++FF+ SIG WRSQRS H LAFA FE + S I IE LS DDQ   ++  LH++    I     M+WEGESDWDD     +SG TVL    D +   RGKLLR +GYAE +PA+G +H++DDGVF L T Y+  AAEERIWFA  +LR RVS I+TS G GV +AS S+EIR L+
Sbjct:    1 MEINEFFELSIGRWRSQRSGHHLAFAHFEEVLSNIDIESLSTDDQTVLEVCKLHDIDPASITHPFRMTWEGESDWDDKP---ISGSTVLVPIPDIENPSRGKLLRENGYAEVVPAVGRYHLSDDGVFTLLTEYDLVAAEERIWFANPNLRFRVSMIKTSDGKGVTTASFSSEIRSLS 174          
The following BLAST results are available for this feature:
BLAST of Ggra7982.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IHF32.320e-9978.01Chromophore lyase CpcS/CpeS 3 n=1 Tax=Gracilariops... [more]
R7Q9S31.540e-6861.49Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A7S1ET489.990e-6860.77Hypothetical protein n=1 Tax=Timspurckia oligopyre... [more]
A0A5J4YKK75.890e-6759.34Chromophore lyase CpcS/CpeS 3 n=1 Tax=Porphyridium... [more]
A0A7S1XFR22.390e-6256.99Hypothetical protein n=1 Tax=Compsopogon caeruleus... [more]
L1JFC71.810e-6054.80Putative phycoerythrin lyase n=3 Tax=Guillardia th... [more]
Putative phycoerythrin lyase n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=UPI0004E5BCA62.820e-6055.81Putative phycoerythrin lyase n=1 Tax=Guillardia th... [more]
A0A7S2ZUG76.130e-6054.05Hypothetical protein n=2 Tax=Rhodosorus marinus Ta... [more]
A0A1Z4L9A91.310e-5855.93Chromophore lyase CpcS/CpeS n=6 Tax=Nostoc TaxID=1... [more]
A0A1U7H2948.680e-5754.24Chromophore lyase CpcS/CpeS n=2 Tax=Nostocaceae Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR018536Chromophore lyase CpcS/CpeSPFAMPF09367CpeScoord: 18..187
e-value: 2.7E-51
score: 173.7
IPR018536Chromophore lyase CpcS/CpeSHAMAPMF_01459Chrphore_lyase_CpxScoord: 16..188
score: 25.04015
IPR012674CalycinGENE3D2.40.128.20coord: 7..190
e-value: 1.7E-57
score: 196.3
NoneNo IPR availableCDDcd19433lipocalin_CpcS-CpeScoord: 16..187
e-value: 4.74272E-57
score: 175.573

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000073_piloncontigtig00000073_pilon:579016..579591 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra7982.t1Ggra7982.t1Gracilaria gracilis GNS1m malemRNAtig00000073_pilon 579016..579591 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra7982.t1 ID=Ggra7982.t1|Name=Ggra7982.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=192bp
MVAEPAARVPFSTMGMTVDDFFQRSIGVWRSQRSSHILAFAQFEAITSEI
SIEQLSIDDQRTKDLASLHNVSLDDIAIAIYMSWEGESDWDDDTEGDLSG
QTVLAVTKDSDKRGKLLRSSGYAETIPAIGEWHMTDDGVFVLETPYEAAA
AEERIWFATKDLRMRVSQIRTSSGAGVISASLSTEIRRLNL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR018536CpcS/CpeS
IPR012674Calycin