Ggra7972.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra7972.t1
Unique NameGgra7972.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length194
Homology
BLAST of Ggra7972.t1 vs. uniprot
Match: A0A2V3IHF8 (Eukaryotic translation initiation factor 4E n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IHF8_9FLOR)

HSP 1 Score: 306 bits (785), Expect = 2.790e-104
Identity = 141/194 (72.68%), Postives = 158/194 (81.44%), Query Frame = 0
Query:    1 MAEEHVQNDSGPHPLQFKWTLWHDFVTTRNRSSVYAANLRPIASFDTVEDFWAVFNSVKEPSQLLSNHTYNLFKFGIDPKWEDPQNADGGEWRVTFPNSHISDLDKCWINTILTVIGEGFGPEESDDIAGIVMNRKRGTNRLAIWTKTATEEDLQTRIGNRWRETSGITGDQQYLLFKEAIN-QKKPRPRYVIS 193
            MAEE  QN+S  HPLQFKWTLWHDF + R R++ YAANLRPIASFDTVE+FWA+FNS+KEPS L S HTYNLFKFGI+PKWED QN DGGEWRVTF  S  S L+ CWINT+LTVIGEGFGPEESDDIAG+VMNRKRG NR+AIWTKTA +E LQ  IG RWRETSGI  DQ YL FK+ I   K+P+P Y + 
Sbjct:    1 MAEEQTQNESVSHPLQFKWTLWHDFPSPRTRNASYAANLRPIASFDTVEEFWAIFNSLKEPSHLQSLHTYNLFKFGIEPKWEDAQNKDGGEWRVTFTPSQHSPLNDCWINTVLTVIGEGFGPEESDDIAGVVMNRKRGNNRVAIWTKTAADEKLQRSIGTRWRETSGIIADQHYLRFKDLIGTNKRPKPHYTVE 194          
BLAST of Ggra7972.t1 vs. uniprot
Match: R7QP45 (Translation initiation factor eIF4, subunit E, type 1 n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QP45_CHOCR)

HSP 1 Score: 249 bits (636), Expect = 1.300e-81
Identity = 121/197 (61.42%), Postives = 148/197 (75.13%), Query Frame = 0
Query:    1 MAEEHVQNDSGP---HPLQFKWTLWHDFVTTRNRSSVYAANLRPIASFDTVEDFWAVFNSVKEPSQLLSNHTYNLFKFGIDPKWEDPQNADGGEWRVTFPNSHISDLDKCWINTILTVIGEGFGPEESDDIAGIVMNRKRGTNRLAIWTKTATEEDLQTRIGNRWRETSGITGDQQYLLFKEAIN-QKKPRPRYVIS 193
            M E    + SG    HPLQFKWTLWHD V   NRSS Y ANLR +ASFDTVEDFWAVFN++ EPS+L  N+TYNLFK+GI+PKWED QN +GGEWR+  PNS+   LDK W+NT+LTV+GEGFGPEESDDI+GIV+N K G +RLAIWTK+A   DLQ RIG RW++T  IT + +Y+ FK+A+   ++   RY I 
Sbjct:    1 MTENTSASKSGEQKTHPLQFKWTLWHDIV---NRSS-YGANLREVASFDTVEDFWAVFNNLMEPSRLPRNNTYNLFKYGIEPKWEDKQNTNGGEWRLPLPNSYKDQLDKYWLNTLLTVLGEGFGPEESDDISGIVLNIKSGKDRLAIWTKSALSADLQMRIGQRWKKTVSITHEIEYISFKDAMGGARRGSSRYRIE 193          
BLAST of Ggra7972.t1 vs. uniprot
Match: Q7XZA0 (Eukaryotic translation initiation factor p28 subunit (Fragment) n=1 Tax=Griffithsia japonica TaxID=83288 RepID=Q7XZA0_GRIJA)

HSP 1 Score: 248 bits (634), Expect = 3.100e-81
Identity = 120/188 (63.83%), Postives = 146/188 (77.66%), Query Frame = 0
Query:   12 PHPLQFKWTLWHDFVTTRNRSSVYAANLRPIASFDTVEDFWAVFNSVKEPSQLLSNHTYNLFKFGIDPKWEDPQNADGGEWRVTFPNSHISDLDKCWINTILTVIGEGFGPEESDDIAGIVMNRKRGTNRLAIWTKTATEEDLQTRIGNRWRETSGI-TGDQQYLLFKEAI------NQKKPRPRYVI 192
            PHPLQFKWTLWHD V  + + + YAANLR +ASFDTVEDFWA+FN++KEPSQL   +TYNLFK GI+PKWEDP N  GGEWRV+ P++    LD+ WINT+LTVIGEGFGP+ESDDIAGIV+N KRG +R+AIWTKTA  E LQ RIG RWRET+ I T   +Y +FK+++      + KK R RY+I
Sbjct:   13 PHPLQFKWTLWHD-VFVKGKGA-YAANLREVASFDTVEDFWALFNNLKEPSQLKPGNTYNLFKAGIEPKWEDPHNDAGGEWRVSLPSTRREVLDEYWINTVLTVIGEGFGPDESDDIAGIVLNIKRGNDRIAIWTKTALNEQLQDRIGKRWRETANIVTIRMEYTVFKDSLMATSKNSNKKARVRYLI 198          
BLAST of Ggra7972.t1 vs. uniprot
Match: A0A1X6NJV7 (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NJV7_PORUM)

HSP 1 Score: 180 bits (456), Expect = 4.490e-54
Identity = 87/193 (45.08%), Postives = 129/193 (66.84%), Query Frame = 0
Query:   11 GP-HPLQFKWTLWHD--FVTTRNRSSVYAANLRPIASFDTVEDFWAVFNSVKEPSQLLSNHTYNLFKFGIDPKWEDPQNADGGEWRVTFPNSHISDLDKCWINTILTVIGEGFGPEESDDIAGIVMNRKRGTNRLAIWTKTATEEDLQTRIGNRWRETSGITG-----DQQYLLFKEAINQK---KPRPRYVI 192
            GP HPLQ++WTLW+D      +NR + +  NL  + +F TVE+FWA+FN++ EPS L  +  Y+LFK GI PKWED  N++GG+W +  P S+   LD+ WI+T+LTVIGEGF    SDDIAG+V++ +R  +R+++WTKT+ +E +Q RIG  WR T+   G       +YL+ K++I +    K + R+V+
Sbjct:   16 GPTHPLQYRWTLWYDNSAAARKNRFASWDENLTKLMTFGTVEEFWALFNNILEPSHLAPSSNYHLFKEGIAPKWEDAANSEGGKWVLMNPPSYKERLDQYWIHTVLTVIGEGFEAPLSDDIAGLVLSTRRQADRISMWTKTSADEPMQKRIGEAWRATATPNGLHDNVQLEYLIHKDSIAKNSSYKNKARFVV 208          
BLAST of Ggra7972.t1 vs. uniprot
Match: A0A2V0PB31 (mRNA cap-binding protein n=1 Tax=Raphidocelis subcapitata TaxID=307507 RepID=A0A2V0PB31_9CHLO)

HSP 1 Score: 165 bits (417), Expect = 3.250e-48
Identity = 76/184 (41.30%), Postives = 114/184 (61.96%), Query Frame = 0
Query:   13 HPLQFKWTLWHDFVTTRNRSSVYAANLRPIASFDTVEDFWAVFNSVKEPSQLLSNHTYNLFKFGIDPKWEDPQNADGGEWRVTFPNSHISD--LDKCWINTILTVIGEGFGPEESDDIAGIVMNRKRGTNRLAIWTKTATEEDLQTRIGNRWRETSGITGDQQ--YLLFKEAINQKKPRPRYVI 192
            HPL+++WTLW D    +   + +   LRP+ SFD VEDFW ++N++K PSQL  + TY LFK GI PKWEDP+NA+GG W  T P +      LD  W++ +L  IGE F  EE D++ G+ +N + G NR+ +WTKTA  E LQ  +G + ++   ++ + +  + +F + + Q K R RY +
Sbjct:   24 HPLEYRWTLWFDNPAQKQSMNKFGQGLRPVYSFDNVEDFWCLYNNIKAPSQLQPSATYYLFKDGIQPKWEDPKNANGGCWTATVPRAANPGQLLDAWWLHLVLACIGEQF--EEGDEVCGVTVNIRNGKNRIEMWTKTAANEALQISVGKQLKQLLDMSDNTKIGFSVFADKLQQGKARDRYSV 205          
BLAST of Ggra7972.t1 vs. uniprot
Match: A0A1U8AQF7 (mRNA cap-binding protein n=1 Tax=Nelumbo nucifera TaxID=4432 RepID=A0A1U8AQF7_NELNU)

HSP 1 Score: 162 bits (409), Expect = 3.670e-47
Identity = 79/195 (40.51%), Postives = 120/195 (61.54%), Query Frame = 0
Query:    1 MAEEHVQNDSGP-----HPLQFKWTLWHDFVTTRNRSSVYAANLRPIASFDTVEDFWAVFNSVKEPSQLLSNHTYNLFKFGIDPKWEDPQNADGGEWRVTFPNSHISDLDKCWINTILTVIGEGFGPEESDDIAGIVMNRKRGTNRLAIWTKTATEEDLQTRIGNRWRETSGITGDQQYLLFKEAINQKKPRPRY 190
            MA E  Q  +G      H L+ KWT W D  +   + + +  +LR I +FDTVE+FW +++ +  PS+  +N  ++LFK GI+PKWEDP+ A+GG+W VT  +S  ++LD  W+ T++ +IGE F  +ESDDI G+V + ++  ++LA+WTKTAT E LQ  IG +W+E   +T    Y    ++   K  R RY
Sbjct:    1 MANEGGQEPTGAGSKQKHRLERKWTFWFDNQSKPKQGAAWGTSLRKIYTFDTVEEFWCLYDQIFRPSKFPANADFHLFKSGIEPKWEDPECANGGKWSVT--SSRKANLDNMWLETLMALIGEQF--DESDDICGVVASVRQRQDKLALWTKTATNEALQMSIGRKWKEIIDVTDKITYSFHDDSRRDKSIRGRY 191          
BLAST of Ggra7972.t1 vs. uniprot
Match: A0A6J1CB61 (mRNA cap-binding protein n=9 Tax=Cucurbitaceae TaxID=3650 RepID=A0A6J1CB61_MOMCH)

HSP 1 Score: 162 bits (409), Expect = 4.530e-47
Identity = 73/189 (38.62%), Postives = 120/189 (63.49%), Query Frame = 0
Query:    2 AEEHVQNDSGPHPLQFKWTLWHDFVTTRNRSSVYAANLRPIASFDTVEDFWAVFNSVKEPSQLLSNHTYNLFKFGIDPKWEDPQNADGGEWRVTFPNSHISDLDKCWINTILTVIGEGFGPEESDDIAGIVMNRKRGTNRLAIWTKTATEEDLQTRIGNRWRETSGITGDQQYLLFKEAINQKKPRPRY 190
            A E   ++   H L+ KWT W D  +   + + +  +LR + +FDTVE+FW +++ + +PS+L +N  ++LFK G++PKWEDP+ A+GG+W VT  +S  ++LD  W+ T++ +IGE F  EESD+I G+V + ++  ++LA+WTKTAT E  Q  IG +W+E   +T    Y   ++   +K  + RY
Sbjct:   14 AAEVADSNQQSHRLERKWTFWFDNQSRPKQGAAWGTSLRKVYTFDTVEEFWCLYDQIFKPSKLPANADFHLFKSGVEPKWEDPECANGGKWTVT--SSRKANLDNMWLETLMALIGEQF--EESDEICGVVASVRQRQDKLALWTKTATNEAAQMSIGRKWKEIIDVTDKITYSFHEDLRREKSAKSRY 198          
BLAST of Ggra7972.t1 vs. uniprot
Match: A0A059B2I6 (mRNA cap-binding protein n=5 Tax=Myrtoideae TaxID=1699513 RepID=A0A059B2I6_EUCGR)

HSP 1 Score: 161 bits (407), Expect = 9.360e-47
Identity = 73/179 (40.78%), Postives = 117/179 (65.36%), Query Frame = 0
Query:   12 PHPLQFKWTLWHDFVTTRNRSSVYAANLRPIASFDTVEDFWAVFNSVKEPSQLLSNHTYNLFKFGIDPKWEDPQNADGGEWRVTFPNSHISDLDKCWINTILTVIGEGFGPEESDDIAGIVMNRKRGTNRLAIWTKTATEEDLQTRIGNRWRETSGITGDQQYLLFKEAINQKKPRPRY 190
            PH L+ KWT W D  +   + + +  +LR + +FDTVE+FW + + + +PS+L +N  ++LFK G++PKWEDP+ A+GG+W VT  +S  + LD  W+ T++ +IGE F  +E+DDI G+V + ++  ++LA+WTKTA+ E LQT IG +W+E   +T    Y    ++  +K  R RY
Sbjct:   25 PHKLERKWTFWFDNQSKPKQGAAWGTSLRKVYTFDTVEEFWCLHDQIFKPSKLPANADFHLFKAGVEPKWEDPECANGGKWTVT--SSRKATLDAMWLETMMGLIGEQF--DEADDICGVVASVRQRGDKLALWTKTASNEALQTGIGRKWKEIMDVTDKITYSFHDDSRREKSVRGRY 199          
BLAST of Ggra7972.t1 vs. uniprot
Match: A0A2G5CYG7 (mRNA cap-binding protein n=2 Tax=Thalictroideae TaxID=1463137 RepID=A0A2G5CYG7_AQUCA)

HSP 1 Score: 160 bits (404), Expect = 2.290e-46
Identity = 74/191 (38.74%), Postives = 114/191 (59.69%), Query Frame = 0
Query:    2 AEEHVQNDSGPHPLQFKWTLWHDFVTTRNRSSVYAANLRPIASFDTVEDFWAVFNSVKEPSQLLSNHTYNLFKFGIDPKWEDPQNADGGEWRVTFPNSHISDLDKCWINTILTVIGEGFGPEESDDIAGIVMNRKRGTNRLAIWTKTATEEDLQTRIGNRWRETSGITGDQQYLLFKEAINQKKPRPRYVI 192
            AE   +    PH L  KWT W D  +   + + +  +LR I +FDTVEDFW +++ +  PS+L++N  +++FK GI+PKWEDP+ A+GG+W VT   S    LD  W+ T++ +IGE F  +ESD+I G+V + +   ++LA+WTK A  E  Q  IG +W+E   +T    Y    ++  +K  R RY +
Sbjct:   11 AEVAAETTKVPHELARKWTFWFDNQSKPKQGAAWGTSLRKIYTFDTVEDFWCLYDQIFRPSKLVANTDFHMFKAGIEPKWEDPECANGGKWSVT---SSRKGLDTMWLETLMALIGENF--DESDEICGVVASVRPRADKLALWTKNAPNEAAQMSIGRKWKEIIDVTDKITYNFHDDSRREKSSRSRYTV 196          
BLAST of Ggra7972.t1 vs. uniprot
Match: eukaryotic translation initiation factor-like n=2 Tax=Tarenaya hassleriana TaxID=28532 RepID=UPI00053C242C (eukaryotic translation initiation factor-like n=2 Tax=Tarenaya hassleriana TaxID=28532 RepID=UPI00053C242C)

HSP 1 Score: 160 bits (404), Expect = 3.080e-46
Identity = 69/187 (36.90%), Postives = 116/187 (62.03%), Query Frame = 0
Query:    6 VQNDSGPHPLQFKWTLWHDFVTTRNRSSVYAANLRPIASFDTVEDFWAVFNSVKEPSQLLSNHTYNLFKFGIDPKWEDPQNADGGEWRVTFPNSHISDLDKCWINTILTVIGEGFGPEESDDIAGIVMNRKRGTNRLAIWTKTATEEDLQTRIGNRWRETSGITGDQQYLLFKEAINQKKPRPRYVI 192
            V+ +  PH L+ KW+ W+D  +   + + + + LR + +FDTVE+FW++ +++ +P +L +N  ++LFK GI+PKWEDP+ A+GG+W      S  S LD  W+ T++ +IGE    +ESD+I G+V N ++  ++L++WTKTAT E  Q  IG +W+E   +T    Y    ++   +  R RY +
Sbjct:   22 VEAEKQPHKLERKWSFWYDNQSKPKQGAAWGSTLRKVYTFDTVEEFWSLHDNIFKPGRLTANADFHLFKAGIEPKWEDPECANGGKWTWAISTSRKSTLDDMWLETLMALIGEQL--DESDEICGVVANVRQRQDKLSLWTKTATNEAAQMSIGKKWKEILDVTDKITYSYHDDSRKDRSARGRYTV 206          
The following BLAST results are available for this feature:
BLAST of Ggra7972.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IHF82.790e-10472.68Eukaryotic translation initiation factor 4E n=1 Ta... [more]
R7QP451.300e-8161.42Translation initiation factor eIF4, subunit E, typ... [more]
Q7XZA03.100e-8163.83Eukaryotic translation initiation factor p28 subun... [more]
A0A1X6NJV74.490e-5445.08Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
A0A2V0PB313.250e-4841.30mRNA cap-binding protein n=1 Tax=Raphidocelis subc... [more]
A0A1U8AQF73.670e-4740.51mRNA cap-binding protein n=1 Tax=Nelumbo nucifera ... [more]
A0A6J1CB614.530e-4738.62mRNA cap-binding protein n=9 Tax=Cucurbitaceae Tax... [more]
A0A059B2I69.360e-4740.78mRNA cap-binding protein n=5 Tax=Myrtoideae TaxID=... [more]
A0A2G5CYG72.290e-4638.74mRNA cap-binding protein n=2 Tax=Thalictroideae Ta... [more]
eukaryotic translation initiation factor-like n=2 Tax=Tarenaya hassleriana TaxID=28532 RepID=UPI00053C242C3.080e-4636.90eukaryotic translation initiation factor-like n=2 ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001040Translation Initiation factor eIF- 4ePFAMPF01652IF4Ecoord: 14..172
e-value: 4.6E-45
score: 153.3
IPR001040Translation Initiation factor eIF- 4ePANTHERPTHR11960EUKARYOTIC TRANSLATION INITIATION FACTOR 4E RELATEDcoord: 4..163
IPR023398Translation Initiation factor eIF- 4e-likeGENE3D3.30.760.10RNA Cap, Translation Initiation Factor Eif4ecoord: 1..189
e-value: 1.4E-53
score: 183.3
IPR023398Translation Initiation factor eIF- 4e-likeSUPERFAMILY55418eIF4e-likecoord: 8..184

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000073_piloncontigtig00000073_pilon:543597..544316 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra7972.t1Ggra7972.t1Gracilaria gracilis GNS1m malemRNAtig00000073_pilon 543597..544316 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra7972.t1 ID=Ggra7972.t1|Name=Ggra7972.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=194bp
MAEEHVQNDSGPHPLQFKWTLWHDFVTTRNRSSVYAANLRPIASFDTVED
FWAVFNSVKEPSQLLSNHTYNLFKFGIDPKWEDPQNADGGEWRVTFPNSH
ISDLDKCWINTILTVIGEGFGPEESDDIAGIVMNRKRGTNRLAIWTKTAT
EEDLQTRIGNRWRETSGITGDQQYLLFKEAINQKKPRPRYVIS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001040TIF_eIF_4E
IPR023398TIF_eIF4e-like