Ggra7970.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra7970.t1
Unique NameGgra7970.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length134
Homology
BLAST of Ggra7970.t1 vs. uniprot
Match: A0A2V3IHN5 (60S ribosomal protein L32-1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IHN5_9FLOR)

HSP 1 Score: 235 bits (600), Expect = 2.340e-77
Identity = 118/133 (88.72%), Postives = 126/133 (94.74%), Query Frame = 0
Query:    1 MAKSLNTLKLVKKRTRKFKRHQCDTKIRVPESWRRPKGIDSRVRRKWRGKVSMPNIGYGSNKKTRHMLPNGFYKFVVHNVNELELLMMQNRVYCAEIASAVSARKRIAILDRAAQLDIRVTNPSAKVNVEETE 133
            MA SLNT+KLVKKRTRKFKRHQCDTKIRV ESWRRPKGIDSRVRRKWRGKVSMPNIGYG+NKKTRHMLPNGF+KFVVHNV+ELE+LMM NRV+CAEI  AVSARKRIAILDRAAQLDIRVTN +A+V VEETE
Sbjct:   48 MATSLNTIKLVKKRTRKFKRHQCDTKIRVAESWRRPKGIDSRVRRKWRGKVSMPNIGYGTNKKTRHMLPNGFFKFVVHNVSELEVLMMHNRVFCAEIGHAVSARKRIAILDRAAQLDIRVTNSNARVKVEETE 180          
BLAST of Ggra7970.t1 vs. uniprot
Match: R7QMX8 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QMX8_CHOCR)

HSP 1 Score: 230 bits (587), Expect = 3.020e-75
Identity = 113/133 (84.96%), Postives = 125/133 (93.98%), Query Frame = 0
Query:    1 MAKSLNTLKLVKKRTRKFKRHQCDTKIRVPESWRRPKGIDSRVRRKWRGKVSMPNIGYGSNKKTRHMLPNGFYKFVVHNVNELELLMMQNRVYCAEIASAVSARKRIAILDRAAQLDIRVTNPSAKVNVEETE 133
            M KS NTLK+VKKRTRKFKRHQ DT++RVPESWRRPKGIDSRVRRKWRGKVSMPNIGYGSNKKTRHMLPNGF+KF+VHNVNELE+LMMQNRVYCAEIA +VS RKRIAI+DRAAQLDI+++N  A+V VEETE
Sbjct:   57 MVKSQNTLKIVKKRTRKFKRHQSDTQMRVPESWRRPKGIDSRVRRKWRGKVSMPNIGYGSNKKTRHMLPNGFFKFLVHNVNELEVLMMQNRVYCAEIAHSVSCRKRIAIIDRAAQLDIKISNAGARVKVEETE 189          
BLAST of Ggra7970.t1 vs. uniprot
Match: Q7XY96 (Ribosome protein L32 n=1 Tax=Griffithsia japonica TaxID=83288 RepID=Q7XY96_GRIJA)

HSP 1 Score: 201 bits (511), Expect = 1.800e-64
Identity = 98/125 (78.40%), Postives = 111/125 (88.80%), Query Frame = 0
Query:    9 KLVKKRTRKFKRHQCDTKIRVPESWRRPKGIDSRVRRKWRGKVSMPNIGYGSNKKTRHMLPNGFYKFVVHNVNELELLMMQNRVYCAEIASAVSARKRIAILDRAAQLDIRVTNPSAKVNVEETE 133
            K+VKKRT+KFKRHQ DT IRV ESWRRPKGIDSRVRRKWRGKV MPNIGYGSNKKTRH+LPNGFYK ++ NV+EL++LMM NR YC EIA +VS+RKRIAILDRAAQ D++VTN  AKV VEET+
Sbjct:    9 KIVKKRTKKFKRHQSDTAIRVSESWRRPKGIDSRVRRKWRGKVLMPNIGYGSNKKTRHLLPNGFYKMLISNVDELDVLMMHNRTYCVEIAHSVSSRKRIAILDRAAQFDLKVTNAGAKVKVEETQ 133          
BLAST of Ggra7970.t1 vs. uniprot
Match: A0A6T6MH63 (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A6T6MH63_9RHOD)

HSP 1 Score: 182 bits (461), Expect = 7.450e-57
Identity = 93/133 (69.92%), Postives = 109/133 (81.95%), Query Frame = 0
Query:    1 MAKSLNTLKLVKKRTRKFKRHQCDTKIRVPESWRRPKGIDSRVRRKWRGKVSMPNIGYGSNKKTRHMLPNGFYKFVVHNVNELELLMMQNRVYCAEIASAVSARKRIAILDRAAQLDIRVTNPSAKVNVEETE 133
            MA  L   K+VKKRT+KFKRH  D  +RV ESWRRPKGIDS VRRK+RGKV MPNIGYGSNKKTRH++PNGFYKFVV+NV EL+LL+M NR Y AEIA  VS++KR  I+ RAA+LD++VTN  A+V VEETE
Sbjct:    1 MAIPLEKPKIVKKRTKKFKRHHTDRYLRVKESWRRPKGIDSCVRRKFRGKVLMPNIGYGSNKKTRHLMPNGFYKFVVNNVKELDLLLMHNRTYAAEIAHNVSSKKRKEIIARAAELDVKVTNSKARVRVEETE 133          
BLAST of Ggra7970.t1 vs. uniprot
Match: M4C135 (Uncharacterized protein n=11 Tax=Oomycota TaxID=4762 RepID=M4C135_HYAAE)

HSP 1 Score: 179 bits (454), Expect = 2.120e-55
Identity = 88/125 (70.40%), Postives = 103/125 (82.40%), Query Frame = 0
Query:    9 KLVKKRTRKFKRHQCDTKIRVPESWRRPKGIDSRVRRKWRGKVSMPNIGYGSNKKTRHMLPNGFYKFVVHNVNELELLMMQNRVYCAEIASAVSARKRIAILDRAAQLDIRVTNPSAKVNVEETE 133
            K+VKKR  KFKRHQ +   RVPESWRRPKGID RVRRK++G + MPN+GYGSNKKTRH+LPNGFYKFVV+NV ELE+L+M NR YCAEIA  VS RKR  I++RA QL++RVTNP A+V  EE E
Sbjct:   11 KIVKKRVTKFKRHQSNRFKRVPESWRRPKGIDGRVRRKFKGAIKMPNVGYGSNKKTRHLLPNGFYKFVVNNVAELEVLLMHNRKYCAEIAHNVSGRKRREIIERAEQLNVRVTNPDARVRAEENE 135          
BLAST of Ggra7970.t1 vs. uniprot
Match: V4TB21 (Uncharacterized protein n=3 Tax=Citrus TaxID=2706 RepID=V4TB21_CITCL)

HSP 1 Score: 176 bits (445), Expect = 7.020e-54
Identity = 93/133 (69.92%), Postives = 106/133 (79.70%), Query Frame = 0
Query:    1 MAKSLNTLKLVKKRTRKFKRHQCDTKIRVPESWRRPKGIDSRVRRKWRGKVSMPNIGYGSNKKTRHMLPNGFYKFVVHNVNELELLMMQNRVYCAEIASAVSARKRIAILDRAAQLDIRVTNPSAKVNVEETE 133
            MA  L T K+VKKR +KFKR Q D KI V E+WRRPKGIDSRVRRK++G V MPNIGYGS+KKTRH LPNGF KFVVHNVNELELLMM NR YCAEIA  VS +KR  I++RAAQLD+ VTN  A++  +E E
Sbjct:   40 MAVPLLTKKIVKKRLKKFKRPQSDRKISVKENWRRPKGIDSRVRRKFKGCVLMPNIGYGSDKKTRHYLPNGFKKFVVHNVNELELLMMHNRTYCAEIAHNVSTKKRKEIVERAAQLDVVVTNKLARLRSQEEE 172          
BLAST of Ggra7970.t1 vs. uniprot
Match: A0A2N9IE63 (Uncharacterized protein n=3 Tax=Fagaceae TaxID=3503 RepID=A0A2N9IE63_FAGSY)

HSP 1 Score: 174 bits (441), Expect = 8.270e-54
Identity = 90/133 (67.67%), Postives = 105/133 (78.95%), Query Frame = 0
Query:    1 MAKSLNTLKLVKKRTRKFKRHQCDTKIRVPESWRRPKGIDSRVRRKWRGKVSMPNIGYGSNKKTRHMLPNGFYKFVVHNVNELELLMMQNRVYCAEIASAVSARKRIAILDRAAQLDIRVTNPSAKVNVEETE 133
            MA  L T K+VKKR ++FKR QCD KI V  +WRRPKGIDSRVRRK++G   MPNIGYG++KKTRH LPNGF KFVVHNVNELELLMM NR YCAEIA  +S RKR  I++RAAQLD+ VTN  A++  +E E
Sbjct:    1 MAVPLLTKKIVKKRVKQFKRPQCDRKISVKTNWRRPKGIDSRVRRKFKGCTLMPNIGYGTDKKTRHYLPNGFKKFVVHNVNELELLMMHNRTYCAEIAHNISTRKRKEIVERAAQLDVVVTNKLARLRSQEDE 133          
BLAST of Ggra7970.t1 vs. uniprot
Match: A0A1Q3BSL4 (Ribosomal_L32e domain-containing protein n=3 Tax=Mesangiospermae TaxID=1437183 RepID=A0A1Q3BSL4_CEPFO)

HSP 1 Score: 174 bits (440), Expect = 1.170e-53
Identity = 92/133 (69.17%), Postives = 104/133 (78.20%), Query Frame = 0
Query:    1 MAKSLNTLKLVKKRTRKFKRHQCDTKIRVPESWRRPKGIDSRVRRKWRGKVSMPNIGYGSNKKTRHMLPNGFYKFVVHNVNELELLMMQNRVYCAEIASAVSARKRIAILDRAAQLDIRVTNPSAKVNVEETE 133
            MA  L T K+VKKR +KFKR Q D KI V ESWRRPKGIDSRVRRK++G   MPNIGYGS+KKTRH LPNGF KFVVHNV ELELLMM NR YCAEIA  +S RKR  I++RAAQLD+ VTN  A++  +E E
Sbjct:    1 MAVPLLTKKIVKKRVKKFKRPQSDRKISVKESWRRPKGIDSRVRRKFKGCTLMPNIGYGSDKKTRHYLPNGFKKFVVHNVKELELLMMHNRTYCAEIAHNISTRKRKDIVERAAQLDVVVTNKLARLRSQEDE 133          
BLAST of Ggra7970.t1 vs. uniprot
Match: A0A1S3B8Z6 (60S ribosomal protein L32-1 n=91 Tax=Mesangiospermae TaxID=1437183 RepID=A0A1S3B8Z6_CUCME)

HSP 1 Score: 174 bits (440), Expect = 1.170e-53
Identity = 91/133 (68.42%), Postives = 106/133 (79.70%), Query Frame = 0
Query:    1 MAKSLNTLKLVKKRTRKFKRHQCDTKIRVPESWRRPKGIDSRVRRKWRGKVSMPNIGYGSNKKTRHMLPNGFYKFVVHNVNELELLMMQNRVYCAEIASAVSARKRIAILDRAAQLDIRVTNPSAKVNVEETE 133
            MA  L + K+VKKRT+KFKR Q D KI V E+WRRPKGIDSRVRRK++G   MPNIGYG++KKTRH LPNGF KFVVHNVNELELLMM NR YCAEIA  VS +KR  I++RAAQLD+ VTN  A++  +E E
Sbjct:    1 MAVPLLSKKIVKKRTKKFKRPQSDRKISVKENWRRPKGIDSRVRRKFKGCTLMPNIGYGTDKKTRHYLPNGFKKFVVHNVNELELLMMHNRTYCAEIAHDVSTKKRKEIVERAAQLDVVVTNKLARLRSQEDE 133          
BLAST of Ggra7970.t1 vs. uniprot
Match: A0A4P9XXJ7 (60S ribosomal protein L32 n=1 Tax=Thamnocephalis sphaerospora TaxID=78915 RepID=A0A4P9XXJ7_9FUNG)

HSP 1 Score: 173 bits (439), Expect = 1.720e-53
Identity = 85/128 (66.41%), Postives = 107/128 (83.59%), Query Frame = 0
Query:    4 SLNTLKLVKKRTRKFKRHQCDTKIRVPESWRRPKGIDSRVRRKWRGKVSMPNIGYGSNKKTRHMLPNGFYKFVVHNVNELELLMMQNRVYCAEIASAVSARKRIAILDRAAQLDIRVTNPSAKVNVEE 131
            SLN   +VKKRT++F RHQ D  +RV  SWR+PKGID+RVRR+++G+++MPNIGYGSNKKTRH++PNGF KF+V NV EL+LLMMQNR Y AEIA  VS+RKRI I++RAAQL+I+VTN  A+V  EE
Sbjct:    6 SLNRTPIVKKRTKRFARHQSDRFLRVDASWRKPKGIDNRVRRRFKGQIAMPNIGYGSNKKTRHLMPNGFKKFLVSNVKELDLLMMQNRTYAAEIAHNVSSRKRIQIVERAAQLNIKVTNAKARVRTEE 133          
The following BLAST results are available for this feature:
BLAST of Ggra7970.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IHN52.340e-7788.7260S ribosomal protein L32-1 n=1 Tax=Gracilariopsis... [more]
R7QMX83.020e-7584.96Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
Q7XY961.800e-6478.40Ribosome protein L32 n=1 Tax=Griffithsia japonica ... [more]
A0A6T6MH637.450e-5769.92Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
M4C1352.120e-5570.40Uncharacterized protein n=11 Tax=Oomycota TaxID=47... [more]
V4TB217.020e-5469.92Uncharacterized protein n=3 Tax=Citrus TaxID=2706 ... [more]
A0A2N9IE638.270e-5467.67Uncharacterized protein n=3 Tax=Fagaceae TaxID=350... [more]
A0A1Q3BSL41.170e-5369.17Ribosomal_L32e domain-containing protein n=3 Tax=M... [more]
A0A1S3B8Z61.170e-5368.4260S ribosomal protein L32-1 n=91 Tax=Mesangiosperm... [more]
A0A4P9XXJ71.720e-5366.4160S ribosomal protein L32 n=1 Tax=Thamnocephalis s... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001515Ribosomal protein L32eSMARTSM01393Ribosomal_L32e_2coord: 15..122
e-value: 3.4E-71
score: 252.5
IPR001515Ribosomal protein L32ePFAMPF01655Ribosomal_L32ecoord: 15..122
e-value: 7.9E-49
score: 164.5
IPR001515Ribosomal protein L32ePANTHERPTHR2341360S RIBOSOMAL PROTEIN L32 AND DNA-DIRECTED RNA POLYMERASE II, SUBUNIT Ncoord: 1..132
IPR001515Ribosomal protein L32eCDDcd00513Ribosomal_L32_L32ecoord: 17..122
e-value: 4.1749E-61
score: 181.189
IPR036351Ribosomal protein L32e superfamilySUPERFAMILY52042Ribosomal protein L32ecoord: 3..130

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000073_piloncontigtig00000073_pilon:541122..541523 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra7970.t1Ggra7970.t1Gracilaria gracilis GNS1m malemRNAtig00000073_pilon 541122..541523 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra7970.t1 ID=Ggra7970.t1|Name=Ggra7970.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=134bp
MAKSLNTLKLVKKRTRKFKRHQCDTKIRVPESWRRPKGIDSRVRRKWRGK
VSMPNIGYGSNKKTRHMLPNGFYKFVVHNVNELELLMMQNRVYCAEIASA
VSARKRIAILDRAAQLDIRVTNPSAKVNVEETE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001515Ribosomal_L32e
IPR036351Ribosomal_L32e_sf