Ggra7967.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra7967.t1
Unique NameGgra7967.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length154
Homology
The following BLAST results are available for this feature:
BLAST of Ggra7967.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR032808DoxX familyPFAMPF13564DoxX_2coord: 5..110
e-value: 3.1E-6
score: 27.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 128..153
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 90..100
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..4
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 53..63
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 36..52
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 21..35
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 16..20
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 101..117
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 64..89
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..20
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 5..15
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 118..153
NoneNo IPR availableTMHMMTMhelixcoord: 47..69
NoneNo IPR availableTMHMMTMhelixcoord: 5..27
NoneNo IPR availableTMHMMTMhelixcoord: 101..120
NoneNo IPR availableTMHMMTMhelixcoord: 74..91

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000073_piloncontigtig00000073_pilon:536286..536747 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra7967.t1Ggra7967.t1Gracilaria gracilis GNS1m malemRNAtig00000073_pilon 536286..536747 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra7967.t1 ID=Ggra7967.t1|Name=Ggra7967.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=154bp
MVTRVLTYFLTFAFTAAALSKLYPTHPNYADMSEKAPLWLSALNLQALLT
PFQLQTLIGVLELLYALCLPFSHAANYGLIVVMLCAIFTHYRIDGAFTKD
ATPAAFLLSLLCLLAVFRNAQSIQPLSEAVGTPQQRQQQEHHSPSEADGN
KED*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032808DoxX