Ggra7960.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra7960.t1
Unique NameGgra7960.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length391
Homology
BLAST of Ggra7960.t1 vs. uniprot
Match: A0A2V3IHH6 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IHH6_9FLOR)

HSP 1 Score: 525 bits (1352), Expect = 4.210e-184
Identity = 267/391 (68.29%), Postives = 317/391 (81.07%), Query Frame = 0
Query:    5 PMPAM---ASNRP-ARLRSGPHPLAR---LRPLPLLRVARSALAALKLLPVFTPRQTLARWRSHRALRSAAREARRSVGTKKTVHEFRLNGLTWHQLYIVQDLRRITQFLRHVEHRLREGDARALRAIVPLERSFSYLVDNVWAVYNVLERDVLFPWVRTGMSEPVVLKALHLFSKERQRIEHASDMAHERLARLVCATGHAYTSAGPCSSKSTFRAIRNKSTRRRRKKSTSSTKHVKGAQDGKQRREKANLNIRDGYKPEEGLTLTASHRAIHADEIRQVAVEMSKLVHDCESLRKTKSSVLYPLIADRFSEIEQMRLTYTLVYSMRSTLGKFIISVYHQAVEKHASRMQWNHYKREVPLPIRVYTPVWRARLYDDSPLGWLRCTNVRDI 388
            P PA+   ASN P +RLR   +P  R   LRPLPLL  ARSALAAL+ LP+FTPR+TLARWRS RALR+AAR+A  +V  + T HEFRLNGLTWH LYI+QDLRRI  FLR+++ R+ +GD     AIVPLERSF++L DNVW+VYN+LERDVLFPW+  G+ +P V +ALH+FSKERQRIE+A+D AHERLARLVCATGH +TSAGPCSS STFRAIRNKS+RRR K  T  T+HV+G QDGK R EKA LN+R GY+PEEG  LT S R I+AD++RQ  V+++K+V DCE+L +TKS +LYPLIA+ F E EQ +LT TLVYSMRSTL KFII++YHQAVEK +SR+ WNHYKREVPLPIRVYT VWRARLYDDSPLGWLR T +RDI
Sbjct:    6 PTPALSTLASNNPVSRLREDRNPFRRFGPLRPLPLLHAARSALAALRFLPIFTPRKTLARWRSQRALRAAARDASHAVNKRTTKHEFRLNGLTWHNLYIIQDLRRINMFLRYIQTRMDKGDTAVSHAIVPLERSFAFLADNVWSVYNILERDVLFPWIARGVEQPAVSRALHMFSKERQRIENAADHAHERLARLVCATGHTHTSAGPCSSNSTFRAIRNKSSRRRHKSKTP-TRHVRGEQDGKARSEKAALNLRHGYQPEEGANLTFSTRPINADDVRQAVVDITKIVDDCENLHETKSGLLYPLIANTFPEREQSQLTLTLVYSMRSTLAKFIITIYHQAVEKQSSRLHWNHYKREVPLPIRVYTSVWRARLYDDSPLGWLRSTKLRDI 395          
BLAST of Ggra7960.t1 vs. uniprot
Match: R7QP34 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QP34_CHOCR)

HSP 1 Score: 277 bits (708), Expect = 6.030e-88
Identity = 147/275 (53.45%), Postives = 190/275 (69.09%), Query Frame = 0
Query:  124 AIVPLERSFSYLVDNVWAVYNVLERDVLFPWVRTGMSEP-VVLKALHLFSKERQRIEHASDMAHERLARLVCATGHAYTSAGPCSSKSTFRAIRNKSTR------RRRKKSTSSTKHVKGAQDGKQRREKANLNIRDGYKP--EEGLTLTASH-RAIHADEIRQVAVEMSKLVHDCESLRKTKSSVLYPLIADRFSEIEQMRLTYTLVYSMRSTLGKFIISVYHQAVEKHASRMQWNHYKREVPLPIRVYTPVWRARLYDDSPLGWLRCTNVRDI 388
            A+V LERS++YLVDNVW VYN LE+DVLFPWV  G+ E   V +AL LF KER RIE   DM H R +R VC+TG+AY+S GPC  K   R   +K  R      R+ KK   +  + +  +  + RR+KAN+ IR+GY P  EEG T   +  RA++ DE+  +A EM +++ D E L KT+  +LYPLIA  F E EQ RLT  LVYSMR+ L KF I++YHQAVEKH++R QW++YK+EVPLPIRVYTPVWR RL+DDSPLGWLR +  +++
Sbjct:   26 AVVKLERSYAYLVDNVWDVYNSLEKDVLFPWVAKGVPENYAVARALLLFGKERDRIEDTVDMLHNRFSRAVCSTGYAYSSMGPCRRK---RQCASKKRRGKXXXERQDKKMRQAALNGESGESEQVRRKKANMQIREGYSPTEEEGKTAVGNKLRAMNPDEVLVLAKEMGEIIEDTERLHKTERGLLYPLIAGTFPEHEQARLTNVLVYSMRAALAKFTITIYHQAVEKHSARSQWSNYKKEVPLPIRVYTPVWRKRLFDDSPLGWLRTSKPKNL 297          
The following BLAST results are available for this feature:
BLAST of Ggra7960.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3IHH64.210e-18468.29Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QP346.030e-8853.45Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 211..249
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 215..231

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000073_piloncontigtig00000073_pilon:521118..522290 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra7960.t1Ggra7960.t1Gracilaria gracilis GNS1m malemRNAtig00000073_pilon 521118..522290 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra7960.t1 ID=Ggra7960.t1|Name=Ggra7960.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=391bp
MIPVPMPAMASNRPARLRSGPHPLARLRPLPLLRVARSALAALKLLPVFT
PRQTLARWRSHRALRSAAREARRSVGTKKTVHEFRLNGLTWHQLYIVQDL
RRITQFLRHVEHRLREGDARALRAIVPLERSFSYLVDNVWAVYNVLERDV
LFPWVRTGMSEPVVLKALHLFSKERQRIEHASDMAHERLARLVCATGHAY
TSAGPCSSKSTFRAIRNKSTRRRRKKSTSSTKHVKGAQDGKQRREKANLN
IRDGYKPEEGLTLTASHRAIHADEIRQVAVEMSKLVHDCESLRKTKSSVL
YPLIADRFSEIEQMRLTYTLVYSMRSTLGKFIISVYHQAVEKHASRMQWN
HYKREVPLPIRVYTPVWRARLYDDSPLGWLRCTNVRDIDG*
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