Ggra7956.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra7956.t1
Unique NameGgra7956.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length314
Homology
BLAST of Ggra7956.t1 vs. uniprot
Match: A0A2V3IFK4 (Alpha-tocopherol transfer protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IFK4_9FLOR)

HSP 1 Score: 360 bits (924), Expect = 1.320e-121
Identity = 169/311 (54.34%), Postives = 238/311 (76.53%), Query Frame = 0
Query:    1 MGSEQTEDVSHLEQNA-PPTGVTAMLHTFRSISANHAVDTLAHVTRADLSSPFVRPAQEEEKLVQALRQSAAQSGKQAVANADAFWLLAALRARKGDIKRAEQLMSNFLTWKQRLAASTDKTERLRSTQKQLQSRFGFVTGHTDVDQRPVINVRLARHDPSTYSALDTVRTLATVLEWTLRTYPAAQTHGVIIVHDFTNIKFRNLDLRLPGEIQNAFSQTFPVRVAAILVCHPPFFLKGIIGIITTIMGSKLKARIRAIDGKDKHILQEYLAPDQIMDDLDMGGTATWTSTKHSEWVERIGREALTWPNPT 310
            M       +  LE NA PP+G+ +    FRS++  ++ D +AHVT+AD+S+PF+R A+EE +LV+++RQ A +SG+Q+VA+A+ FW+LAA+RARKGD+ RAE+L++NF++W++R+ ++ DK  RL  TQ QL+S F FV+G TD   RPV+++++A+HDPS++SALDT+RTL+TVLEWTLRTYPAAQTHG++++HD ++I   NLDLR+PGEIQ AFSQ+FPVRVA+I++CHPPFFLK I+G  ++ M SKLKARI  +   DK++L E   P  I+ DL +GGTA WT  +H EWV RI  +A  WP  T
Sbjct:    1 MADTPAHTIERLEGNARPPSGIASFFSVFRSLARQNSKDEIAHVTKADISTPFIRSAEEETQLVESVRQRALESGRQSVADAEHFWVLAAVRARKGDVTRAEKLLANFISWRKRIESAADKQVRLDKTQSQLKSCFMFVSGTTDKAGRPVLHLKMAKHDPSSFSALDTIRTLSTVLEWTLRTYPAAQTHGMVVLHDMSDIALHNLDLRMPGEIQKAFSQSFPVRVASIILCHPPFFLKHIVGFFSSFMSSKLKARITTVGKNDKNLLDELFEPHNILVDLGLGGTAIWTQERHLEWVRRIDNDAKAWPEHT 311          
BLAST of Ggra7956.t1 vs. uniprot
Match: A0A8J2FU96 (Hypothetical protein n=1 Tax=Amoebophrya sp. A25 TaxID=1410381 RepID=A0A8J2FU96_9DINO)

HSP 1 Score: 72.0 bits (175), Expect = 1.270e-10
Identity = 49/165 (29.70%), Postives = 82/165 (49.70%), Query Frame = 0
Query:  147 RPVINVRLARHDPSTYSALDTVRTLATVLEWTLRTYPA-----------AQTHGVIIVHDFTNIKFRNLDLRLPGEIQNAFSQTFPVRVAAILVCHPPFFLKGI-IGIITTIMGSKLKARIRAIDGKDKHILQEYLAPDQIMDDLDMGGTATWTSTKHSEWVERI 299
            R V+N RL  H+P    A   +R +  +L   L+  P+            Q +GV ++HDF  I   N+D  +   +   F+  FP+R+AAI +  PPFF++ + + I   IM +KL +RI+ +   +   L+ +  PDQ+++  D GG       +   W E+I
Sbjct:  166 RGVLNTRLRHHNPKLVPAESAIRAVTLLLYNLLQGAPSEGDARAEEAEKTQLNGVCVLHDFRGISLSNVDPAIGRALFKLFTGRFPIRLAAIYIVEPPFFVRYVMLPIARMIMPTKLTSRIQPLSSVND--LKNFFEPDQLLE--DFGGNVPDIDVEKL-WSEQI 325          
BLAST of Ggra7956.t1 vs. uniprot
Match: A0A7S1UYX5 (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1UYX5_9STRA)

HSP 1 Score: 68.2 bits (165), Expect = 1.800e-9
Identity = 54/227 (23.79%), Postives = 101/227 (44.49%), Query Frame = 0
Query:   85 WLLAALRARKGDIKRAEQLMSNFLTWKQRLAA-STDKT-------ERLRSTQKQLQSRFGFVTGHTDVDQRPVINVRLARHDPSTYSALDTVRTLATVLEWTLRTYPAAQTHGVIIVHDFTNIKFRNLDLRLPGEIQNAFSQTFPVRVAAILVCHPPFFLKGIIGIITTIMGSKLKARIRAIDGKDKHILQEYLAPDQIMDDL--DMGGTATWTSTKHSEWVERIGR 301
            +LL  LRA   +   A + +  +  W +RL+A   DK        + L+     L+  F  +   TD   R ++    +++D + YS     R +   +   L +   AQ  GV+ +      K    D  L   + ++     PVRV+A+++CHPPFF   +  ++   MG +++ R+R + G    +++E        D L  ++GG     +TK+ +  +  G+
Sbjct:   64 FLLQFLRAEVFNADLAAKRLCGY--WTKRLSAFGPDKAFLPMTLDQALKDDDFPLRMGFATLVPATDPVGRSILFFDPSKNDRTKYSIESLTRAVWYYMHAALES-ETAQQKGVVFMIYPQKAKLSQFDRGLANSVMSSLKLCMPVRVSALMICHPPFFFSIVFSVVKVFMGERVRKRVRVMSGSQISVMEELQVLGLTADRLPTELGGAIELNATKYVDERKAAGK 287          
BLAST of Ggra7956.t1 vs. uniprot
Match: A0A8J1YWV0 (Hypothetical protein n=1 Tax=Amoebophrya sp. A120 TaxID=2202890 RepID=A0A8J1YWV0_9DINO)

HSP 1 Score: 67.8 bits (164), Expect = 4.050e-9
Identity = 54/191 (28.27%), Postives = 85/191 (44.50%), Query Frame = 0
Query:   87 LAALRARKGDIKRAEQLMSNFLT-------WKQRLAASTDKTERLRSTQKQLQSRFGFVTGHTDVDQRPVINVRLARHDPSTYSALDTVRTLATVLEWTLRTYP-----------AAQTHGVIIVHDFTNIKFRNLDLRLPGEIQNAFSQTFPVRVAAILVCHPPFFLKGII-GIITTIMGSKLKARIRAI 258
            LA +R RK D  R  +LM  F         WK+    ++    R++   + L  R        D   R V+N RL  H+P   S   T+R L  +L   L   P             Q +GV + HDF N+   N+D  +   +   FS  FP+R+ A+ +  PPFF++ I+  ++  ++  KL +RI  +
Sbjct:   93 LACVRTRKYDDARIPKLMREFTDLLQEMKQWKKEDVIASISKNRVKEGFRLLPRR--------DKHGRAVMNTRLRYHEPREVSTQTTIRALTLMLYNALLGAPFDEDKREAEAEKTQLNGVCVFHDFRNLTLSNVDPGVGRGLIKLFSGRFPLRLGAVYMLEPPFFIRYIVLPMMRLLLPKKLSSRITTV 275          
BLAST of Ggra7956.t1 vs. uniprot
Match: A0A834II61 (CRAL-TRIO domain-containing protein n=1 Tax=Rhynchophorus ferrugineus TaxID=354439 RepID=A0A834II61_RHYFE)

HSP 1 Score: 61.2 bits (147), Expect = 4.020e-7
Identity = 58/256 (22.66%), Postives = 113/256 (44.14%), Query Frame = 0
Query:   57 QEEEKLVQALRQSAAQSGKQAVANADAFWLLAALRARKGDIKRAEQLMSNFLTWKQRLAASTDKTERLRSTQKQLQS-----RFG-FVTGHTDVDQRPVINVRLARHDPSTYSALDTVRTLATVLEWTLRTYPAAQTHGVIIVHDFTNIKFRNLDLRLPGEIQNAFS--QTFPVRVAAILVCHPPFFLKGIIGIITTIMGSKLKARIRAIDG---KDKHILQEYLAPDQIMDDLDMGGTATWTSTKHSEWVERIGR 301
            Q+ E+ ++ +R    + G    A  ++ ++L  LR  K D+ + ++ ++N+   ++      D+ E  R+   +LQ      + G F+      D + V+ VR+A HDP  Y   D  +    +L+        AQ +GVI + D + + F +     P  ++NA    Q + +R   +     P ++   I +I + M  K+K RI+   G   K + I+ + + P      ++ GG           W+E++ R
Sbjct:   27 QDRERALREIRAWLKEEGSWLNARGESKFILPFLRGCKFDVDKTKKKLTNYYVMRR------DRPEWFRNRNPRLQHIQDLIKMGVFLPLKRHHDNKLVVIVRIAAHDPKKYDWNDIFKVGKMILDVVCMEDQRAQIYGVIAIFDLSGLSFGHYRTITPSLMKNAVYAWQNYHIRPKNLEFVSSPIYINVAINLIKSFMTEKMKQRIKVHFGGTEKAQDIVDKDILP------VEFGGENETVEELGEYWLEKLLR 270          
BLAST of Ggra7956.t1 vs. uniprot
Match: A0A8J8VXQ3 (Uncharacterized protein n=1 Tax=Penicillium sp. RFL-2021a TaxID=2839758 RepID=A0A8J8VXQ3_9EURO)

HSP 1 Score: 59.3 bits (142), Expect = 3.700e-6
Identity = 57/221 (25.79%), Postives = 90/221 (40.72%), Query Frame = 0
Query:   86 LLAALRARKGDIKRAEQLMSNFLTWKQR------------------LAASTDKTERLRSTQKQLQSRFGFVTGH-TDVDQRPVINVRLARHDPSTYSALDTVRTLATVLEWTLRTYPAAQTHGVIIVHDFTNIKFRNLDLRLPGEIQNAFSQTFPVRVAAILVCHPPFFLKGIIGIITTIMGSKLKARIRAIDGKDKHILQEYLAPDQIMDDLDMGGTATW 287
            LL  LRARK D+K+A  +M + + W+ +                  LA+S D  ++ +      Q R G    H  D   RP+  VR   H  S    +DT+         T R   A       I+ D T     N+D      +   F   +P  + ++L+   P+    I  +I   +   + A+I     K++  L+E++AP QIM +LD  G   W
Sbjct:  268 LLRFLRARKWDVKKALIMMISTMRWRLQEVHVDDDIMANGEAEALELASSADPAKKKKGEDFLKQMRMGKSYLHGCDKRGRPICVVRARLHKASDQE-VDTLERFTVYTIETARLLLAPPVETATIIFDMTGFTLANMDYTPVKFMIKCFEANYPESLGSVLIHKAPWIFSSIWSVIKGWLDPVVAAKIHFT--KNRQDLEEFIAPSQIMKELD--GDENW 483          
The following BLAST results are available for this feature:
BLAST of Ggra7956.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
A0A2V3IFK41.320e-12154.34Alpha-tocopherol transfer protein n=1 Tax=Gracilar... [more]
A0A8J2FU961.270e-1029.70Hypothetical protein n=1 Tax=Amoebophrya sp. A25 T... [more]
A0A7S1UYX51.800e-923.79Hypothetical protein n=1 Tax=Grammatophora oceanic... [more]
A0A8J1YWV04.050e-928.27Hypothetical protein n=1 Tax=Amoebophrya sp. A120 ... [more]
A0A834II614.020e-722.66CRAL-TRIO domain-containing protein n=1 Tax=Rhynch... [more]
A0A8J8VXQ33.700e-625.79Uncharacterized protein n=1 Tax=Penicillium sp. RF... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001251CRAL-TRIO lipid binding domainSMARTSM00516sec14_4coord: 130..286
e-value: 9.9E-7
score: 38.4
IPR001251CRAL-TRIO lipid binding domainPFAMPF00650CRAL_TRIOcoord: 135..279
e-value: 7.3E-21
score: 74.6
IPR001251CRAL-TRIO lipid binding domainPROSITEPS50191CRAL_TRIOcoord: 138..289
score: 11.485815
IPR001251CRAL-TRIO lipid binding domainCDDcd00170SEC14coord: 137..284
e-value: 5.75021E-12
score: 60.8618
NoneNo IPR availableGENE3D1.10.8.20coord: 53..113
e-value: 4.2E-7
score: 32.1
NoneNo IPR availablePANTHERPTHR10174ALPHA-TOCOPHEROL TRANSFER PROTEIN-RELATEDcoord: 62..298
NoneNo IPR availablePANTHERPTHR10174:SF208CRAL-TRIO DOMAIN-CONTAINING PROTEIN DDB_G0278031coord: 62..298
IPR036865CRAL-TRIO lipid binding domain superfamilyGENE3D3.40.525.10coord: 120..306
e-value: 7.3E-26
score: 92.7
IPR036865CRAL-TRIO lipid binding domain superfamilySUPERFAMILY52087CRAL/TRIO domaincoord: 129..295
IPR036273CRAL/TRIO, N-terminal domain superfamilySUPERFAMILY46938CRAL/TRIO N-terminal domaincoord: 57..114

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000073_piloncontigtig00000073_pilon:515578..516519 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra7956.t1Ggra7956.t1Gracilaria gracilis GNS1m malemRNAtig00000073_pilon 515578..516519 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra7956.t1 ID=Ggra7956.t1|Name=Ggra7956.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=314bp
MGSEQTEDVSHLEQNAPPTGVTAMLHTFRSISANHAVDTLAHVTRADLSS
PFVRPAQEEEKLVQALRQSAAQSGKQAVANADAFWLLAALRARKGDIKRA
EQLMSNFLTWKQRLAASTDKTERLRSTQKQLQSRFGFVTGHTDVDQRPVI
NVRLARHDPSTYSALDTVRTLATVLEWTLRTYPAAQTHGVIIVHDFTNIK
FRNLDLRLPGEIQNAFSQTFPVRVAAILVCHPPFFLKGIIGIITTIMGSK
LKARIRAIDGKDKHILQEYLAPDQIMDDLDMGGTATWTSTKHSEWVERIG
REALTWPNPTQSE*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001251CRAL-TRIO_dom
IPR036865CRAL-TRIO_dom_sf
IPR036273CRAL/TRIO_N_dom_sf