Ggra7947.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Ggra7947.t1
Unique Name	Ggra7947.t1
Type	polypeptide
Organism	Gracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length	190

Homology

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BLAST of Ggra7947.t1 vs. uniprot
Match: A0A2V3IFH4 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IFH4_9FLOR)

HSP 1 Score: 265 bits (676), Expect = 7.690e-88
Identity = 145/192 (75.52%), Postives = 165/192 (85.94%), Query Frame = 0

Query:    1 MSFLRCCVGADPRPPPENVRPVSASNRRS-AAAAASGYATDASGNKKK-MKLPTEVFFDPTKPDGQLSSVTDPPNSNRDHSDSKKKKEHKERSVKSPAQQKESRKAHATPERAELELPDNNGLTRGQNFMKVEKWLRSSTKYQQMDITPKEIANIEDGPTDAPDNAAEPPSEKDRLPQ-AMVNHHPTTNPSR 189
            MSFLRCCVGADPRPPP+NVRPVSAS+RR+  AAAAS Y +D S NKKK MKLPTEVFFDPTKPDGQLSSVTDPPNSNRD SD KK+KEHK+RS    +QQ+E+RK ++T +R +L+LPDNNGLTRGQNFMKVEKWLRSS K+QQ+DITPK I NIEDGPT   D++AEPPSEKDRLPQ  + NHH +T PSR
Sbjct:    1 MSFLRCCVGADPRPPPDNVRPVSASHRRTNPAAAASAYPSDPSVNKKKKMKLPTEVFFDPTKPDGQLSSVTDPPNSNRDCSDPKKRKEHKDRS----SQQREARKHNSTKDRTDLQLPDNNGLTRGQNFMKVEKWLRSSCKHQQVDITPKTITNIEDGPTLNRDSSAEPPSEKDRLPQHPIANHHQSTAPSR 188

[Close]

BLAST of Ggra7947.t1 vs. uniprot
Match: R7Q3R2 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q3R2_CHOCR)

HSP 1 Score: 191 bits (486), Expect = 7.340e-59
Identity = 114/193 (59.07%), Postives = 133/193 (68.91%), Query Frame = 0

Query:    1 MSFLRCCVGADPRPPPENVRPVSASNRRSAAAAASGYA----------TDASGNKKKMKLPTEVFFDPTKPDGQLSSVTDPPNSNRDHSDSKKKKEHKERSVKSPAQQKESRKAHATPERAELELPDNNGLTRGQNFMKVEKWLRSSTKYQQMDITPKEIANIEDGPTDAPDNAAEPPSEKDRLP-QAMVNHH 182
            MSFLRCC+G D RPPPE +RPV AS    A  +  G+A          T A     K+KLP EVFFDPTKPDGQLSSVTDPPNS RD S+  KKK+ KERS +   Q +E+RK  A  ++A+L  PDNNGLTRGQNFMKVEKWLR+++ YQQ+DITP  I NIED P    D AA+PPSEKDRLP Q+    H
Sbjct:    1 MSFLRCCIGGDSRPPPEQIRPVGAS----APPSRRGHARPPPIPQPGHTPAQDVSSKLKLPNEVFFDPTKPDGQLSSVTDPPNSARDFSEMNKKKDPKERS-RPGRQHRETRKDAAADDKADLNAPDNNGLTRGQNFMKVEKWLRNASMYQQIDITPGPITNIEDTPPQISD-AADPPSEKDRLPPQSKSKEH 187

The following BLAST results are available for this feature:

BLAST of Ggra7947.t1 vs. uniprot

BLAST of Ggra7947.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A2V3IFH4	7.690e-88	75.52	Uncharacterized protein n=1 Tax=Gracilariopsis cho...	[more]
R7Q3R2	7.340e-59	59.07	Uncharacterized protein n=1 Tax=Chondrus crispus T...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..189
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 119..145
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 75..112

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
tig00000073_pilon	contig	tig00000073_pilon:497309..497989 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria gracilis GNS1m male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Ggra7947.t1	Ggra7947.t1	Gracilaria gracilis GNS1m male	mRNA	tig00000073_pilon 497309..497989 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Ggra7947.t1 ID=Ggra7947.t1|Name=Ggra7947.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=190bp
MSFLRCCVGADPRPPPENVRPVSASNRRSAAAAASGYATDASGNKKKMKL
PTEVFFDPTKPDGQLSSVTDPPNSNRDHSDSKKKKEHKERSVKSPAQQKE
SRKAHATPERAELELPDNNGLTRGQNFMKVEKWLRSSTKYQQMDITPKEI
ANIEDGPTDAPDNAAEPPSEKDRLPQAMVNHHPTTNPSR*