Ggra7946.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra7946.t1
Unique NameGgra7946.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length215
Homology
BLAST of Ggra7946.t1 vs. uniprot
Match: A0A2V3IFJ0 (Trafficking protein particle complex subunit n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IFJ0_9FLOR)

HSP 1 Score: 345 bits (884), Expect = 4.000e-119
Identity = 173/186 (93.01%), Postives = 183/186 (98.39%), Query Frame = 0
Query:   29 MSLAQARGEVNMDAYLALFAELVSYCRDRVESVMALQDKLSQLGYRIGRRALDLIIAREKISRRDTRLRNILSFIALTLWTFLYGKQADSLKKVRDSDLEYYIEEAEPLVNKYISVPADYGHFNCAAFSAGIINGVLNSAGFPAEVTAKVLARDNENDAPSQGQPLTIYYIKFEPEVLEREKRLGT 214
            MSL QARGEVNMDAYLALFAELVSYCRDRVESVMALQ+KLSQLGYRIGRRALDLI+AREKIS+RDTRL +IL+FIALTLWTFLYGKQADSLKKVRDS+LEYYIEEAEPLVNKYISVPADYGHFNCAAFSAGIINGVLNSAGFPAEVTAKVLARDNEN++ +QGQPLTIYYIKFEPEVLERE+RLGT
Sbjct:    1 MSLTQARGEVNMDAYLALFAELVSYCRDRVESVMALQEKLSQLGYRIGRRALDLIVAREKISKRDTRLLSILNFIALTLWTFLYGKQADSLKKVRDSELEYYIEEAEPLVNKYISVPADYGHFNCAAFSAGIINGVLNSAGFPAEVTAKVLARDNENESAAQGQPLTIYYIKFEPEVLEREQRLGT 186          
BLAST of Ggra7946.t1 vs. uniprot
Match: R7Q1P4 (Trafficking protein particle complex subunit n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q1P4_CHOCR)

HSP 1 Score: 337 bits (863), Expect = 1.820e-115
Identity = 174/215 (80.93%), Postives = 196/215 (91.16%), Query Frame = 0
Query:    1 MQSRGKRSMLSD-VSASNSSSGITRSILEMSLAQARGEVNMDAYLALFAELVSYCRDRVESVMALQDKLSQLGYRIGRRALDLIIAREKISRRDTRLRNILSFIALTLWTFLYGKQADSLKKVRDSDLEYYIEEAEPLVNKYISVPADYGHFNCAAFSAGIINGVLNSAGFPAEVTAKVLARDNEND-APSQGQPLTIYYIKFEPEVLEREKRLG 213
            MQSR ++S++ D V  S+S  GIT++ILEMSL QARGEVNMDAYL LF+ELVSYCRDRVESVMALQ+KL+QLGYRIGRRAL+LI+AREK+SRR+TRL N+L+FIA TLW FLYGKQAD LKKVRDS+LEYYIEEAEPLVNKYISVPADYGHFNCA+FSAGIINGVL+SAGFPAEVTAKVLAR+ + D +  QGQPLTIYYIKFEPEVLEREKRL 
Sbjct:    1 MQSRSRKSLMHDSVPGSSSPHGITKNILEMSLNQARGEVNMDAYLVLFSELVSYCRDRVESVMALQEKLAQLGYRIGRRALELILAREKVSRRETRLLNMLNFIASTLWNFLYGKQADCLKKVRDSELEYYIEEAEPLVNKYISVPADYGHFNCASFSAGIINGVLDSAGFPAEVTAKVLARNGDEDLSQQQGQPLTIYYIKFEPEVLEREKRLN 215          
BLAST of Ggra7946.t1 vs. uniprot
Match: A0A5J4Z4A9 (Trafficking protein particle complex subunit n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z4A9_PORPP)

HSP 1 Score: 199 bits (505), Expect = 1.940e-60
Identity = 103/194 (53.09%), Postives = 142/194 (73.20%), Query Frame = 0
Query:   21 GITRSILEMSLAQARGEVNMDAYLALFAELVSYCRDRVESVMALQDKLSQLGYRIGRRALDLIIARE-KISRRDTRLRNILSFIALTLWTFLYGKQADSLKKVRDSDLEYYIEEAEPLVNKYISVPADYGHFNCAAFSAGIINGVLNSAGFPAEVTAKVLARDNENDAPSQGQPLTIYYIKFEPEVLEREKRLG 213
            G T +IL+  LA+ RGEV++ AYL LF ELV+Y R+RV SV+AL+ +L+ +GYR+G RAL+ + A+  K   R+TR+  IL+F+   LW FL+GK ADSLKKV +SD E+YIEE EPLVN ++SVP D+G  NCAAF  GI++G+L++AGF  EVT  V  RD ++  P   + +T+YYIKF  EV++RE+RL 
Sbjct:   72 GSTLNILDQPLARQRGEVSLSAYLLLFCELVAYSRNRVSSVVALEARLAAVGYRVGERALEYVCAKSGKPLPRETRILGILNFVVTNLWRFLFGKNADSLKKVGNSDAEFYIEEVEPLVNTFVSVPKDFGALNCAAFQGGIVHGILSAAGFECEVTTYV--RD-DSSKPGSAE-VTMYYIKFSNEVIQRERRLA 261          
BLAST of Ggra7946.t1 vs. uniprot
Match: A0A7S1XDI8 (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1XDI8_9RHOD)

HSP 1 Score: 185 bits (470), Expect = 4.990e-55
Identity = 98/190 (51.58%), Postives = 131/190 (68.95%), Query Frame = 0
Query:   25 SILEMSLAQARG--EVNMDAYLALFAELVSYCRDRVESVMALQDKLSQLGYRIGRRALDLIIAREKISRRDTRLRNILSFIALTLWTFLYGKQADSLKKVRDSDLEYYIEEAEPLVNKYISVPADYGHFNCAAFSAGIINGVLNSAGFPAEVTAKVLARDNENDAPSQGQPLTIYYIKFEPEVLEREKRL 212
            S++E  L +A    EVN   Y  LF+ELV YCR+RV SV  L+ KL+ +G R+GRRALDL++ REKI RR+TR+  IL+F+  +LW  L+GKQAD LKK  D+  ++YIEE +P+VNKYISVP DYG  NCAAF  GII+G L +AGFP++VT   +         S  +P+TIY I+F   V+ RE++L
Sbjct:   91 SVVEQPLVRAGAGREVNEAVYALLFSELVQYCRNRVVSVTDLETKLADVGKRVGRRALDLVVIREKILRRETRIIGILNFVVTSLWKALFGKQADGLKKFTDA--KFYIEEQDPMVNKYISVPKDYGRLNCAAFVGGIIDGALEAAGFPSKVTVDYI--------DSSARPVTIYVIEFGDSVVARERKL 270          
BLAST of Ggra7946.t1 vs. uniprot
Match: M2VXT4 (Trafficking protein particle complex subunit n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2VXT4_GALSU)

HSP 1 Score: 183 bits (464), Expect = 7.070e-55
Identity = 94/188 (50.00%), Postives = 131/188 (69.68%), Query Frame = 0
Query:   26 ILEMSLAQARGEVNMDAYLALFAELVSYCRDRVESVMALQDKLSQLGYRIGRRALDLIIAREKISRRDTRLRNILSFIALTLWTFLYGKQADSLKKVRDSDLEYYIEEAEPLVNKYISVPADYGHFNCAAFSAGIINGVLNSAGFPAEVTAKVLARDNENDAPSQGQPLTIYYIKFEPEVLEREKRLG 213
            IL+  L ++R E+ +  +  LFAE V Y + RV+ V  L++KL+QLGYR+G+RAL+L+  REK++RR+ RL +IL FI + LW FL+ K AD LKKV D + EYYIEE EPLVN+YISVP D+G  NCAAF AGII G L+SAGF A V+A  + R+ ++        +TI+ I+ +  V+ RE++L 
Sbjct:   29 ILDRPLTRSREELYLSTFSFLFAEAVQYLQTRVQQVSELEEKLNQLGYRVGQRALELLCFREKLNRREIRLVSILGFIRVQLWKFLFKKSADYLKKVTDREDEYYIEEEEPLVNRYISVPKDFGQLNCAAFMAGIIRGALDSAGFTASVSAHYIHREEKSRL---AFTVTIFMIRLDESVMNRERKLA 213          
BLAST of Ggra7946.t1 vs. uniprot
Match: A0A7S1XIF2 (Trafficking protein particle complex subunit n=1 Tax=Erythrolobus australicus TaxID=1077150 RepID=A0A7S1XIF2_9RHOD)

HSP 1 Score: 181 bits (460), Expect = 5.390e-54
Identity = 93/200 (46.50%), Postives = 136/200 (68.00%), Query Frame = 0
Query:   15 ASNSSSGITRSILEMSLAQARGEVNMDAYLALFAELVSYCRDRVESVMALQDKLSQLGYRIGRRALDLIIAREKISRRDTRLRNILSFIALTLWTFLYGKQADSLKKVRDSDLEYYIEEAEPLVNKYISVPADYGHFNCAAFSAGIINGVLNSAGFPAEVTAKVLARDNENDAPSQGQP-LTIYYIKFEPEVLEREKRLG 213
            A+N ++  + +I++ SLA+ RGEV+  AYL LF+E+V Y R RV SV   + +LS LG ++G RAL+ + AR+K  RR+ +L   L+F+  T+W FLYG QADS+KKV +++ EYYIEE  PLVN+Y+ VP DYG  NCA+F+AGI++G+LN+AGF   V+A +     +        P +T+Y+IK   E + RE+RL 
Sbjct:   38 AANKNAAPSLNIVDRSLARPRGEVSASAYLLLFSEMVQYSRGRVTSVPDFEQRLSLLGQQVGVRALEFVSARDKSFRRELKLLGALNFVVTTMWKFLYGVQADSIKKVNNAEDEYYIEEVAPLVNRYVVVPKDYGELNCASFNAGIVHGILNAAGFKCNVSAFM----RQTPGTKSTDPFVTLYFIKVAKETMLRERRLA 233          
BLAST of Ggra7946.t1 vs. uniprot
Match: A0A1Y1IFD3 (Trafficking protein particle complex subunit n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1IFD3_KLENI)

HSP 1 Score: 173 bits (439), Expect = 2.370e-51
Identity = 93/190 (48.95%), Postives = 126/190 (66.32%), Query Frame = 0
Query:   26 ILEMSLAQARGEVNMDAYLALFAELVSYCRDRVESVMALQDKLSQLGYRIGRRALDLIIAREKISRRDTRLRNILSFIALTLWTFLYGKQADSLKKVRDSDLEYYIEEAEPLVNKYISVPADYGHFNCAAFSAGIINGVLNSAGFPAEVTAKVLARDNENDAPSQGQ--PLTIYYIKFEPEVLEREKRLG 213
            +++  L + + EVN+ A+  LF+ELV Y + +V +V  L+ KL + GY +G R L+L+  REK +RR+TRL  IL+FI  T+W  L+GKQADSL+K    + EY I E E LVN++ISVP D G FNC A+ AGI+ GVL+SAGFPA VTA  +        P +GQ  P T   IKF PEV+ RE+R+G
Sbjct:   14 VVDRPLPKGKTEVNLSAFAFLFSELVQYFQTKVNNVNELERKLEEAGYGVGLRVLELLCHREKANRRETRLLGILTFIHSTVWKALFGKQADSLEKATTEEDEYMISEKELLVNRFISVPKDMGQFNCGAYVAGIVKGVLDSAGFPARVTAHFV--------PIEGQLRPRTTILIKFSPEVMLREQRMG 195          
BLAST of Ggra7946.t1 vs. uniprot
Match: A0A7S0XUX8 (Hypothetical protein (Fragment) n=2 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S0XUX8_HEMAN)

HSP 1 Score: 171 bits (432), Expect = 1.510e-50
Identity = 88/184 (47.83%), Postives = 123/184 (66.85%), Query Frame = 0
Query:   26 ILEMSLAQARGEVNMDAYLALFAELVSYCRDRVESVMALQDKLSQLGYRIGRRALDLIIAREKISRRDTRLRNILSFIALTLWTFLYGKQADSLKKVRDSDLEYYIEEAEPLVNKYISVPADYGHFNCAAFSAGIINGVLNSAGFPAEVTAKVLARDNENDAPSQGQPLTIYYIKFEPEVLERE 209
            I++  L + + EV++ AY  LF+E+V Y + RV S+  L+ KL+  GY +G R L+L++ REK S+R+TR+  +LSFI  T+W  ++GK AD+L+KV + D EY I E EPLVN YISVP D GH NCAAF AG+++G+L+SA FPA VTA  +        P   +  T   IKF PEV++RE
Sbjct:    1 IVDRPLPRGKTEVSVSAYCLLFSEMVQYYQQRVSSIQDLEKKLAGAGYGVGVRMLELVVLREKGSKRETRVVGMLSFIKDTVWKVMWGKPADALEKVTEKDDEYMIHEKEPLVNTYISVPKDMGHLNCAAFVAGVVHGILDSADFPARVTAHTV--------PVGAETRTTILIKFAPEVMDRE 176          
BLAST of Ggra7946.t1 vs. uniprot
Match: A0A388LE84 (Trafficking protein particle complex subunit n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388LE84_CHABU)

HSP 1 Score: 171 bits (432), Expect = 2.800e-50
Identity = 92/190 (48.42%), Postives = 126/190 (66.32%), Query Frame = 0
Query:   26 ILEMSLAQARGEVNMDAYLALFAELVSYCRDRVESVMALQDKLSQLGYRIGRRALDLIIAREKISRRDTRLRNILSFIALTLWTFLYGKQADSLKKVRDSDLEYYIEEAEPLVNKYISVPADYGHFNCAAFSAGIINGVLNSAGFPAEVTAKVLARDNENDAPSQGQPL--TIYYIKFEPEVLEREKRLG 213
            +++  + + + EV++ A+  LF+ELV YC+ RV++V  L+ KL   G+ IG R L+L+  REK +RR+TRL  ILSF+  T+W  L+GK ADSL+K  + + EY I E E LVN++ISVP D G FNC AF AGI+ GVL SAGFPA VTA  +        P +GQP   T   IKF  EV+ER+++LG
Sbjct:   14 VVDRPIGKGKNEVSLSAFAFLFSELVQYCQTRVDNVAELERKLESSGFGIGLRMLELLCHREKGNRRETRLLGILSFVHSTVWKALFGKVADSLEKSTEHEDEYMISEKELLVNRFISVPKDMGAFNCGAFVAGIVQGVLESAGFPARVTAHFV--------PVEGQPRPRTTLLIKFSEEVVERDRQLG 195          
BLAST of Ggra7946.t1 vs. uniprot
Match: E9HC76 (Trafficking protein particle complex subunit 5 n=3 Tax=Daphnia TaxID=6668 RepID=E9HC76_DAPPU)

HSP 1 Score: 167 bits (424), Expect = 3.330e-49
Identity = 89/195 (45.64%), Postives = 127/195 (65.13%), Query Frame = 0
Query:   18 SSSGITRSILEMSLAQARGEVNMDAYLALFAELVSYCRDRVESVMALQDKLSQLGYRIGRRALDLIIAREKISRRDTRLRNILSFIALTLWTFLYGKQADSLKKVRDSDLEYYIEEAEPLVNKYISVPADYGHFNCAAFSAGIINGVLNSAGFPAEVTAKVLARDNENDAPSQGQPLTIYYIKFEPEVLEREKRL 212
            SS  +  +IL+ S+++ + EV+++ +  LF+E+V YC++RV +V  LQ KLS+ G ++G R LDL+I REK  +R+ +L  IL FI  T+W  L+GK+AD L+   D D  YY+ E E LVNK+ISVP D G+ NCAAFSAGII G+LN++ FPA+VTA                  T Y IKF+  V+ R+K+L
Sbjct:    2 SSLKLKTTILDRSISKGKNEVSLNGFALLFSEIVQYCQNRVSTVPELQAKLSEFGQQVGIRMLDLLIVREKNGKREIKLLQILIFIKSTVWKSLFGKEADKLEHANDDDHTYYLIEKESLVNKFISVPKDKGNLNCAAFSAGIIEGILNTSNFPAKVTA-------------HWHKGTTYMIKFDESVILRDKQL 183          
The following BLAST results are available for this feature:
BLAST of Ggra7946.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IFJ04.000e-11993.01Trafficking protein particle complex subunit n=1 T... [more]
R7Q1P41.820e-11580.93Trafficking protein particle complex subunit n=1 T... [more]
A0A5J4Z4A91.940e-6053.09Trafficking protein particle complex subunit n=1 T... [more]
A0A7S1XDI84.990e-5551.58Hypothetical protein n=1 Tax=Compsopogon caeruleus... [more]
M2VXT47.070e-5550.00Trafficking protein particle complex subunit n=1 T... [more]
A0A7S1XIF25.390e-5446.50Trafficking protein particle complex subunit n=1 T... [more]
A0A1Y1IFD32.370e-5148.95Trafficking protein particle complex subunit n=1 T... [more]
A0A7S0XUX81.510e-5047.83Hypothetical protein (Fragment) n=2 Tax=Hemiselmis... [more]
A0A388LE842.800e-5048.42Trafficking protein particle complex subunit n=1 T... [more]
E9HC763.330e-4945.64Trafficking protein particle complex subunit 5 n=3... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR016696TRAPP I complex, subunit 5PIRSFPIRSF017479TRAPP_1_Trs31coord: 1..214
e-value: 2.0E-63
score: 211.6
IPR016696TRAPP I complex, subunit 5PANTHERPTHR2090241-2 PROTEIN ANTIGEN-RELATEDcoord: 21..213
IPR016696TRAPP I complex, subunit 5CDDcd14943TRAPPC5_Trs31coord: 38..202
e-value: 4.95857E-75
score: 221.639
IPR007194Transport protein particle (TRAPP) componentPFAMPF04051TRAPPcoord: 46..181
e-value: 1.3E-34
score: 119.1
NoneNo IPR availableGENE3D3.30.1380.20Trafficking protein particle complex subunit 3coord: 36..214
e-value: 1.5E-52
score: 179.4
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..95
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 114..214
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 96..113
NoneNo IPR availableTMHMMTMhelixcoord: 96..113
IPR024096NO signalling/Golgi transport ligand-binding domain superfamilySUPERFAMILY111126Ligand-binding domain in the NO signalling and Golgi transportcoord: 36..212

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000073_piloncontigtig00000073_pilon:496069..496836 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra7946.t1Ggra7946.t1Gracilaria gracilis GNS1m malemRNAtig00000073_pilon 496069..496836 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra7946.t1 ID=Ggra7946.t1|Name=Ggra7946.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=215bp
MQSRGKRSMLSDVSASNSSSGITRSILEMSLAQARGEVNMDAYLALFAEL
VSYCRDRVESVMALQDKLSQLGYRIGRRALDLIIAREKISRRDTRLRNIL
SFIALTLWTFLYGKQADSLKKVRDSDLEYYIEEAEPLVNKYISVPADYGH
FNCAAFSAGIINGVLNSAGFPAEVTAKVLARDNENDAPSQGQPLTIYYIK
FEPEVLEREKRLGT*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR016696TRAPP-I_su5
IPR007194TRAPP_component
IPR024096NO_sig/Golgi_transp_ligand-bd