Ggra7940.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra7940.t1
Unique NameGgra7940.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length250
Homology
BLAST of Ggra7940.t1 vs. uniprot
Match: A0A2V3IW83 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IW83_9FLOR)

HSP 1 Score: 334 bits (856), Expect = 2.550e-113
Identity = 166/245 (67.76%), Postives = 199/245 (81.22%), Query Frame = 0
Query:    2 MWRYPLLRLSPQLLRVDKFIATSSHRQASLPYSLPSIA---RNFAADQGPKAQETPPRSRRLADDIKEYNEATSSGRLARFDSSLIPIAEAAVFPRIKTTSLSTKRIVIHDEAGKVPVTLVLVAFRSFADDQLASWREAFTHHFPQGLWFDVTINETFGAQALSGFVQRWQRGRTDQALHDYYVSFNDRAREPLESLLLSRNRMYGYVLLLDRRARVRFRGSGMANSAAISALLESGERLVTEDN 243
            MWR  + RLS + + V     + S   +    S PSI    R+FA+D G   Q+ P RSRR ADD++EYNEAT +GR+A+FD+SLIP+++A +FPRIKTTSLSTKRIVIHDEA   P+TLV+VAFRSFADDQLASWR  F+ HFP+G WFDVT+NE+FGAQALSGFVQRWQRGRTDQ LHDYYVSFNDRAREPLE+LLLSRNRMYGYVLLLDR+ARVRFRGSGMANS AI  +++ G++L+ ED+
Sbjct:    1 MWRNHVFRLSRRFVHVSNSWTSRSKFPSPHILSTPSITVTHRSFASDNGTSPQQKPTRSRRFADDVREYNEATRTGRIAQFDTSLIPVSKANIFPRIKTTSLSTKRIVIHDEAADSPLTLVMVAFRSFADDQLASWRFPFSEHFPEGKWFDVTVNESFGAQALSGFVQRWQRGRTDQTLHDYYVSFNDRAREPLETLLLSRNRMYGYVLLLDRKARVRFRGSGMANSHAIDVMVDCGQQLMKEDS 245          
BLAST of Ggra7940.t1 vs. uniprot
Match: R7Q3Q1 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q3Q1_CHOCR)

HSP 1 Score: 243 bits (619), Expect = 6.360e-77
Identity = 122/186 (65.59%), Postives = 145/186 (77.96%), Query Frame = 0
Query:   59 RLADDIKEYNEATSSGRLARFDSSLIPIAEAAVFPRIKTTSLSTKRIVIHDEAGKVPVTLVLVAFRSFADDQLASWREAFTHHFPQGL--WFDVTINETFGAQALSGFVQRWQRGRTDQALHDYYVSFNDRAREPLESLLLSRNRMYGYVLLLDRRARVRFRGSGMANSAAISALLESGERLVTED 242
            RL +DIKEY    +SG+ A FD   IP+  A+VFPRIKTTSLSTKRIVIHD+A K  VTLVLVAFRSFADDQL SW+  F    PQ    W+DVTINE+FGAQALSGF+QR QRGRTD ALHD+YV+FN +AREPLE+LL SRNRM+GYVLLLD +ARVRFR SGMA    + A++   + +++ED
Sbjct:   90 RLTEDIKEYKARVASGKTASFDPVPIPVESASVFPRIKTTSLSTKRIVIHDKAMKNSVTLVLVAFRSFADDQLQSWKNTFVKDLPQDSVQWYDVTINESFGAQALSGFIQRLQRGRTDPALHDFYVAFNSKAREPLEALLPSRNRMFGYVLLLDPQARVRFRASGMATEPGLQAMISCAKEILSED 275          
BLAST of Ggra7940.t1 vs. uniprot
Match: A0A7S1TAV0 (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1TAV0_9RHOD)

HSP 1 Score: 154 bits (390), Expect = 3.890e-43
Identity = 90/200 (45.00%), Postives = 124/200 (62.00%), Query Frame = 0
Query:   52 ETPPRSRRLADDIKEYNEATSSGR--LARFDSSLIPIAE-AAVFPRIKTTSLSTKRIVIHDEAGKVPVTLVLVAFRSFADDQLASWREAFTHHFPQGLWFDVTINETFGAQALSGFVQRWQRGRTDQALHDYYVSFNDRAREPLESLLLSRNRMYGYVLLLDRRARVRFRGSGMANSAAISALLESGERLVTEDNTEMQS 248
            +T  RSR L  D+ E N +T +G   L   D+ ++P++E   VFPRIKTTSL TKRIV+ DEA + P TLV++ FR FA  Q  SW++      P   W ++TINE+   QALSGF Q  QR R  + +HD Y+++N  A E LE+  LS+NR+  + LLLDRRARVR+R  G A    +S L ++  +L +ED    +S
Sbjct:   18 QTETRSRGLVADLNELNRSTRAGAPSLNLADTFVLPLSENPVVFPRIKTTSLRTKRIVLQDEATRAPATLVILLFREFAHKQAVSWQQQDIIAVP---WLEMTINESVVHQALSGFAQGIQRRRIPEQMHDRYIAYNSGA-EKLETFFLSQNRLLAHALLLDRRARVRWRACGFATDDHVSLLSKAVAQLTSEDQNLAKS 213          
BLAST of Ggra7940.t1 vs. uniprot
Match: A0A5J4YJ66 (Uncharacterized protein n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YJ66_PORPP)

HSP 1 Score: 129 bits (325), Expect = 1.520e-32
Identity = 82/186 (44.09%), Postives = 109/186 (58.60%), Query Frame = 0
Query:   62 DDIKEY-NEATSSGRLARFDSSLIPIAEAAVFPRIKTTSLSTKRIVIHDEAGKVPVTLVLVAFRSFADDQLASWREAFTHH-----FPQGLWFDVTINETFGAQALSGFVQRWQRGRTDQALHDYYVSFNDRAREPLESLLLSRNRMYGYVLLLDRRARVRFRGSGMANSAAISALLESGERLVTE 241
            DD++E  N+    G     D  +IP +EA V PR KTTSLST R+VI D+A K    LV V FR  A +Q+ASW   F  H     +     F + INE+F  QALSG+ Q   R    +  HD+ +SFND   E L SLL  +NR+YG+VLLLDR AR+R+R  G A+   +S LL + ++L+ E
Sbjct:  121 DDLRELANDHDQKGFNQGPD--IIPASEAPVIPRFKTTSLSTHRVVIQDDALKARANLVCVLFREGASEQVASWSVPFKKHVQFAPYGSAQVFQLIINESFVFQALSGWAQHRLRTMVPKEEHDFVLSFNDSNPE-LISLLAHKNRLYGHVLLLDRSARIRWRACGRASPETLSYLLNATDQLLQE 303          
BLAST of Ggra7940.t1 vs. uniprot
Match: A0A7S0ZKL2 (Hypothetical protein n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZKL2_9RHOD)

HSP 1 Score: 118 bits (296), Expect = 3.600e-29
Identity = 75/195 (38.46%), Postives = 109/195 (55.90%), Query Frame = 0
Query:   56 RSRRLADDIKEYNEATSSGRLA--RFDSSLIPIAEAAVFPRIKTTSLSTKRIVIHDEAGKVPVTLVLVAFRSFADDQLASWREAFTHHFPQ---GLW--FDVTINETFGAQALSGFVQRWQRGRTDQALHDYYVSFNDRAREPLESLLLSRNRMYGYVLLLDRRARVRFRGSGMANSAAISALLESGERLVTEDN 243
            + R L  ++ +  E      ++  R   +LIPI  A    R KTTSLSTKR V+ DEA +    LV + FR  A  QL SW E F  H  +   GL   + + +NE++  QA+SGF Q   R  T    HD+ +S+N +  E L   L SRNR+YG+VLL+DR AR+R+  +G A++  +  LL+  + L+ ED+
Sbjct:   17 KKRYLTKEVGQLQEFLRDREISGSRSGDALIPIENARSLHRFKTTSLSTKRSVLQDEATRWSAMLVQITFRKIAMPQLLSWGEPFDEHIEKYYPGLARSYLLIVNESWSHQAVSGFAQSSLRKTTPTEDHDFVLSYNAKD-EVLVGQLTSRNRLYGHVLLVDRNARIRWAANGRADAKGLEILLKCTDDLIKEDS 210          
BLAST of Ggra7940.t1 vs. uniprot
Match: A0A0G4ALJ6 (AT1G08220-like protein n=1 Tax=Melianthus villosus TaxID=377280 RepID=A0A0G4ALJ6_9ROSI)

HSP 1 Score: 58.2 bits (139), Expect = 2.090e-6
Identity = 53/213 (24.88%), Postives = 88/213 (41.31%), Query Frame = 0
Query:   59 RLADDIKEYNEATSS------GRLARFDSSLIPIAEAAVFPRIKTTSLSTKRIVIH--------DEAGKVPVTLVLVAFRSFADDQLASWREAFTHHFPQGLWFDVTINETFGAQALSGFVQRWQ---------------RGRTDQALHDYYVSFNDRAREPLESLLLSRNRMYGYVLLLDRRARVRFRGSGMANSAAISALLESGERLVTED 242
            RLAD++     A  S      G++A  +  +IP  EA  FP ++      K + I         D+A     +LV ++FR+ +   +ASW   F      G + D T  + +    +   +  W+               +G  D        SF D      E  +L  N + GY+ L+D+  R+R++G GMA    +S+LL     L+ E+
Sbjct:   65 RLADEMTRGYFADMSELKQHGGKIAVANKIIIPAIEAVKFPALEVNYSDGKMLKIPSNGTVTDADQAESPKASLVCLSFRASSQAMIASWTTPFL-----GTFSDKTNIDLYEVSLIDSQILCWKPIKRMLLKMMKNSNHQGENDGLKRQIVYSFGDHYYFRKELKIL--NLLTGYIFLIDKFGRIRWKGFGMATEDELSSLLSCTSLLLEEE 270          
The following BLAST results are available for this feature:
BLAST of Ggra7940.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
A0A2V3IW832.550e-11367.76Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7Q3Q16.360e-7765.59Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A7S1TAV03.890e-4345.00Hypothetical protein n=1 Tax=Compsopogon caeruleus... [more]
A0A5J4YJ661.520e-3244.09Uncharacterized protein n=1 Tax=Porphyridium purpu... [more]
A0A7S0ZKL23.600e-2938.46Hypothetical protein n=1 Tax=Timspurckia oligopyre... [more]
A0A0G4ALJ62.090e-624.88AT1G08220-like protein n=1 Tax=Melianthus villosus... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007849ATPase assembly factor ATP10PFAMPF05176ATP-synt_10coord: 62..233
e-value: 1.0E-12
score: 47.9
IPR007849ATPase assembly factor ATP10PANTHERPTHR28106MITOCHONDRIAL ATPASE COMPLEX SUBUNIT ATP10coord: 63..242
NoneNo IPR availablePANTHERPTHR28106:SF1MITOCHONDRIAL ATPASE COMPLEX SUBUNIT ATP10coord: 63..242

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000073_piloncontigtig00000073_pilon:484781..485530 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra7940.t1Ggra7940.t1Gracilaria gracilis GNS1m malemRNAtig00000073_pilon 484781..485530 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra7940.t1 ID=Ggra7940.t1|Name=Ggra7940.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=250bp
MMWRYPLLRLSPQLLRVDKFIATSSHRQASLPYSLPSIARNFAADQGPKA
QETPPRSRRLADDIKEYNEATSSGRLARFDSSLIPIAEAAVFPRIKTTSL
STKRIVIHDEAGKVPVTLVLVAFRSFADDQLASWREAFTHHFPQGLWFDV
TINETFGAQALSGFVQRWQRGRTDQALHDYYVSFNDRAREPLESLLLSRN
RMYGYVLLLDRRARVRFRGSGMANSAAISALLESGERLVTEDNTEMQSL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007849ATP10