Ggra7898.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Ggra7898.t1
Unique Name	Ggra7898.t1
Type	polypeptide
Organism	Gracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length	408

Homology

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BLAST of Ggra7898.t1 vs. uniprot
Match: A0A2V3IVS2 (Splicing factor 3B subunit 4 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IVS2_9FLOR)

HSP 1 Score: 508 bits (1309), Expect = 4.290e-178
Identity = 265/345 (76.81%), Postives = 280/345 (81.16%), Query Frame = 0

Query:   62 MAATLASNRNPTDRNADATVHIAQLDEKVTDALLWELMVQAAPVRHVYIPRNRITGEHFGYGFCEFHTALDALYAAKVLNLVPLYSKPIRISQSTVDRRTQDVGANLFIGNLVDEVDEKLLHDAFSAFGPLVEAPFIMRDPNTNQSKRYGFVKYSSFEHSDAAIAAMNGQYVCNTPITVQYAFKKDSEKRERHGSQAERILAAKGAEARRTADLENQLRPHTLFSDKPSRRVQADHPL-PPHPAAPYPPD--ARMPTYXXXXXXXXXXXXXXPNWTGGVPQQYAQSSQVNHYPSPNVVAPSQIGWTQNRQYGSSNPANRPAPYPQQSAPNARAARPVPDEAAPQY 403
            MAATLASNRNPTDRNADATVHIAQLDEKVTDALLWELMVQAAPVRHVYIPRNRITG+HFGYGFCEFHT LDALYAAKVLN   LY+KPIRISQSTVDRR QD+GANLFIGNLVDEVDEKLLHDAFSAFGPLVEAPFIMRDPNTNQSKRYGFVKYS FEHSDAAIAAMNGQYVCNTPITVQYAFKKDS+KRERHGSQAERILAAKGAEARRTA+LEN+LRPHT FSDKP +R+ A+  L PP P   YPP   A  P++              PNW    PQQYA    V  +    +   S IGW+ NRQ+GS     R  PYPQQ AP ARA RPVPDEAAP Y
Sbjct:    1 MAATLASNRNPTDRNADATVHIAQLDEKVTDALLWELMVQAAPVRHVYIPRNRITGDHFGYGFCEFHTPLDALYAAKVLNWTHLYTKPIRISQSTVDRRNQDIGANLFIGNLVDEVDEKLLHDAFSAFGPLVEAPFIMRDPNTNQSKRYGFVKYSCFEHSDAAIAAMNGQYVCNTPITVQYAFKKDSDKRERHGSQAERILAAKGAEARRTAELENKLRPHTHFSDKPPKRISAESQLRPPAPYPGYPPGGYAAYPSHHPDYHAQPQV----PNWARAPPQQYASVPPVGEFAHRGMAETSHIGWSTNRQFGSRTHTGRMPPYPQQQAPRARAPRPVPDEAAPVY 341

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BLAST of Ggra7898.t1 vs. uniprot
Match: R7QBP1 (Spliceosome associated protein, putative n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QBP1_CHOCR)

HSP 1 Score: 350 bits (897), Expect = 1.230e-113
Identity = 194/360 (53.89%), Postives = 232/360 (64.44%), Query Frame = 0

Query:   62 MAATLASNRNPTDRNADATVHIAQLDEKVTDALLWELMVQAAPVRHVYIPRNRITGEHFGYGFCEFHTALDALYAAKVLNLVPLYSKPIRISQSTVDRRTQDVGANLFIGNLVDEVDEKLLHDAFSAFGPLVEAPFIMRDPNTNQSKRYGFVKYSSFEHSDAAIAAMNGQYVCNTPITVQYAFKKDSEKRERHGSQAERILAAKGAE-ARRTADLENQLRPHTLFSDKPSRRVQ--------------ADHPLPPHPAAPYPPDARMPTYXXXXXXXXXXXXXXPNWTGGVPQQYAQSSQVNHYPSPNVVAPSQIGWTQNRQYGSSNPANRPAPYPQQSAPNARAARPVPDEAAPQYMQG 406
            MAA  +SNRNP+DRNADAT+H+ QLD+KVTDALLWELMVQA PVR+VYIPR+RI+G H+GYGFCEFHTALDALYA K LN+V L+SKP+R+SQST+DRR+QDVGANLF+GNLVD V EKLLHDAFSAFGP+V+AP+IMRD  + QSKRYGFVK++SF  +DAAIAAM+GQY+CN PI+VQYA+KKD   RERHGS AER+LAA  AE A   A     L PHTLF+DKP+                  A   +PP P   YP     P                P      PQ Y             V   +Q+GWT  R Y +  P    A +P  + P+  +  P     A    QG
Sbjct:  101 MAAVASSNRNPSDRNADATLHVGQLDDKVTDALLWELMVQAGPVRNVYIPRDRISGAHYGYGFCEFHTALDALYALKTLNMVSLFSKPLRLSQSTLDRRSQDVGANLFVGNLVDAVTEKLLHDAFSAFGPVVDAPYIMRDAVSQQSKRYGFVKFASFAAADAAIAAMDGQYICNAPISVQYAYKKDGHARERHGSHAERLLAASAAESAAANASRHPLLLPHTLFADKPASAAPPAXXXXXXXXXXXPAPMHMPPLPQHVYP---YQPQTHGQHMPQWQRAAYPPQPPAVPPQGYHYXXXXXXXXXXXVAPTTQLGWTPKRPYANGPPPA--ASFPPHAQPHMPSHAPYGVSQAAMAQQG 455

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BLAST of Ggra7898.t1 vs. uniprot
Match: M2XCI3 (Splicing factor 3B subunit 4 n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2XCI3_GALSU)

HSP 1 Score: 271 bits (692), Expect = 8.870e-86
Identity = 129/215 (60.00%), Postives = 167/215 (77.67%), Query Frame = 0

Query:   72 PTDRNADATVHIAQLDEKVTDALLWELMVQAAPVRHVYIPRNRITGEHFGYGFCEFHTALDALYAAKVLNLVPLYSKPIRISQSTVDRRTQDVGANLFIGNLVDEVDEKLLHDAFSAFGPLVEAPFIMRDPNTNQSKRYGFVKYSSFEHSDAAIAAMNGQYVCNTPITVQYAFKKDSEKRERHGSQAERILAAKGAEARRTADLENQLRPHTLFS 286
            P +RN +AT+++  LDE+V++ LLWELMVQ  PV+HVYIPR+RITG+  GYGF EF   +DA+YA KVLN+V +Y+KP+R+ Q++ D+R+ D+GANLF+GNL  EVDEKLL+D FSAFG ++E P IMRDP T +SK YGF+K+ SFE SDAAI  MNGQ++ N  +TVQYAFKKD++  ERHGSQAERILAA+     R       LRPH++FS
Sbjct:   16 PAERNQEATLYVGNLDERVSEELLWELMVQVGPVKHVYIPRDRITGQTQGYGFVEFKNEMDAIYATKVLNMVRVYAKPLRLQQASTDKRSMDIGANLFVGNLSQEVDEKLLYDTFSAFGAIIETPHIMRDPETGESKGYGFIKFDSFEASDAAIETMNGQFLGNNQVTVQYAFKKDTK--ERHGSQAERILAARA----RAVSANALLRPHSMFS 224

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BLAST of Ggra7898.t1 vs. uniprot
Match: A0A7S1TCY5 (Hypothetical protein (Fragment) n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1TCY5_9RHOD)

HSP 1 Score: 267 bits (682), Expect = 1.150e-83
Identity = 126/195 (64.62%), Postives = 159/195 (81.54%), Query Frame = 0

Query:   71 NPTDRNADATVHIAQLDEKVTDALLWELMVQAAPVRHVYIPRNRITGEHFGYGFCEFHTALDALYAAKVLNLVPLYSKPIRISQSTVDRRTQDVGANLFIGNLVDEVDEKLLHDAFSAFGPLVEAPFIMRDPNTNQSKRYGFVKYSSFEHSDAAIAAMNGQYVCNTPITVQYAFKKDSEKRERHGSQAERILAAK 265
            NP +RN +AT+++  LDEKVT+ LLWELM+QA  V+HVYIPR+RITG   GYGFCEF    DA+YAAKV+N++ L++KPIR+ QS++DRR+ DVGANLF+GNL  +VDEKLL+D FSAFG ++E P IMRD +T +SK YGFVKYS FE SDAA+ AMNGQY+ N  I VQYAFKK+   +ERHGS+AER+LAA+
Sbjct:   15 NPVERNQEATIYVGGLDEKVTEELLWELMLQAGTVKHVYIPRDRITGAPQGYGFCEFRHEEDAVYAAKVMNMINLFNKPIRVQQSSLDRRSLDVGANLFVGNLDPDVDEKLLYDTFSAFGLIIETPHIMRDTDTGESKGYGFVKYSEFEASDAAMEAMNGQYIMNRSIVVQYAFKKEGNPQERHGSEAERLLAAR 209

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BLAST of Ggra7898.t1 vs. uniprot
Match: A0A7S3AAN1 (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3AAN1_9RHOD)

HSP 1 Score: 259 bits (661), Expect = 1.050e-79
Identity = 122/196 (62.24%), Postives = 151/196 (77.04%), Query Frame = 0

Query:   71 NPTDRNADATVHIAQLDEKVTDALLWELMVQAAPVRHVYIPRNRITGEHFGYGFCEFHTALDALYAAKVLNLVPLYSKPIRISQSTVDRRTQDVGANLFIGNLVDEVDEKLLHDAFSAFGPLVEAPFIMRDPNTNQSKRYGFVKYSSFEHSDAAIAAMNGQYVCNTPITVQYAFKKDSEKRERHGSQAERILAAKG 266
            N  +RN +ATV +  LDEKV+D +LWELM+QA PV+HVYIPR+RIT +  GYGFCEF T  DA YA ++LN++ LY KPI++  S+  +R  +VGAN+FIGNL  +VDEK LHD FSAFG ++E P IMRDP T  S+ YGFVK++SFE SDAAI AMNG ++ N  I VQYAFKKD   +ERHGSQAER+LAAKG
Sbjct:   12 NAAERNQEATVFVGGLDEKVSDEILWELMIQAGPVKHVYIPRDRITRQAQGYGFCEFRTEEDAQYAVRILNMIKLYGKPIKVQPSSEHKRNMEVGANIFIGNLDPDVDEKTLHDTFSAFGLIIETPHIMRDPETGNSRGYGFVKFNSFEASDAAIEAMNGGFIMNRSIVVQYAFKKDGHNKERHGSQAERLLAAKG 207

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BLAST of Ggra7898.t1 vs. uniprot
Match: splicing factor 3B subunit 4-like n=2 Tax=Centruroides sculpturatus TaxID=218467 RepID=UPI000C6D1086 (splicing factor 3B subunit 4-like n=2 Tax=Centruroides sculpturatus TaxID=218467 RepID=UPI000C6D1086)

HSP 1 Score: 254 bits (649), Expect = 1.850e-79
Identity = 125/216 (57.87%), Postives = 163/216 (75.46%), Query Frame = 0

Query:   74 DRNADATVHIAQLDEKVTDALLWELMVQAAPVRHVYIPRNRITGEHFGYGFCEFHTALDALYAAKVLNLVPLYSKPIRISQSTVDRRTQDVGANLFIGNLVDEVDEKLLHDAFSAFGPLVEAPFIMRDPNTNQSKRYGFVKYSSFEHSDAAIAAMNGQYVCNTPITVQYAFKKDSEKRERHGSQAERILAAKGAEARRTADLENQLRPHTLFSDKP 289
            +RN DAT++I  LDEKV++A+LWEL VQA PV +V++P++R+TG+H GYGF EF    DA YA K++N++ LY KPIR+++++  ++  DVGAN+FIGNL  EVDEKLL+D FSAFG +++ P IMRDP T  SK Y F+ ++SFE SDAAI AMNGQY+CN PIT+ YAFKKDS K ERHGS AER+LAA+         L +  RPH LF+D P
Sbjct:    8 ERNQDATIYIGGLDEKVSEAILWELFVQAGPVVNVHMPKDRVTGQHQGYGFVEFMGEEDADYAIKIMNMIKLYGKPIRVNKASAHQKNLDVGANIFIGNLDPEVDEKLLYDTFSAFGVILQTPKIMRDPETGNSKGYAFINFASFEASDAAIEAMNGQYLCNRPITISYAFKKDS-KGERHGSAAERLLAAQNP-------LSHADRPHQLFADAP 215

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BLAST of Ggra7898.t1 vs. uniprot
Match: A0A0U9I6N8 (RNA recognition motif containing protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A0U9I6N8_KLENI)

HSP 1 Score: 258 bits (660), Expect = 6.030e-79
Identity = 129/216 (59.72%), Postives = 160/216 (74.07%), Query Frame = 0

Query:   74 DRNADATVHIAQLDEKVTDALLWELMVQAAPVRHVYIPRNRITGEHFGYGFCEFHTALDALYAAKVLNLVPLYSKPIRISQSTVDRRTQDVGANLFIGNLVDEVDEKLLHDAFSAFGPLVEAPFIMRDPNTNQSKRYGFVKYSSFEHSDAAIAAMNGQYVCNTPITVQYAFKKDSEKRERHGSQAERILAAKGAEARRTADLENQLRPHTLFSDKP 289
            +RN DAT ++  LD +VT+ LLWE+ VQA PV +VY+P++R+T  H GYGF EF +  DA YA KV+N++ LY KPIR+++++ DRRT DVGANLFIGNL +EVDEKLLHD FSAFG ++  P IMRDP +  SK +GF+ Y SFE SDAAI AMNGQY+CN  ITV YAFKKD+ K ERHGS AER+LA+    A R        RPHTLF+D P
Sbjct:   20 ERNQDATAYVGNLDTQVTEELLWEMFVQAGPVVNVYVPKDRVTSLHQGYGFVEFRSEEDADYAVKVMNMIKLYGKPIRVNKASSDRRTADVGANLFIGNLDEEVDEKLLHDTFSAFGVILSNPKIMRDPESGNSKGFGFISYDSFEASDAAIEAMNGQYLCNKAITVSYAFKKDT-KGERHGSAAERLLASSNPAALRN-------RPHTLFADAP 227

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BLAST of Ggra7898.t1 vs. uniprot
Match: A0A7K8ASE3 (SF3B4 factor (Fragment) n=35 Tax=Aves TaxID=8782 RepID=A0A7K8ASE3_9CORV)

HSP 1 Score: 249 bits (637), Expect = 1.040e-77
Identity = 122/216 (56.48%), Postives = 161/216 (74.54%), Query Frame = 0

Query:   74 DRNADATVHIAQLDEKVTDALLWELMVQAAPVRHVYIPRNRITGEHFGYGFCEFHTALDALYAAKVLNLVPLYSKPIRISQSTVDRRTQDVGANLFIGNLVDEVDEKLLHDAFSAFGPLVEAPFIMRDPNTNQSKRYGFVKYSSFEHSDAAIAAMNGQYVCNTPITVQYAFKKDSEKRERHGSQAERILAAKGAEARRTADLENQLRPHTLFSDKP 289
            +RN DATV++  LDEKV++ LLWEL +QA PV + ++P++R+TG+H GYGF EF +  DA YA K++N++ LY KPIR+++++   +  DVGAN+FIGNL  E+DEKLL+D FSAFG +++ P IMRDP+T  SK Y F+ ++SF+ SDAAI AMNGQY+CN PITV YAFKKDS K ERHGS AER+LAA+         L    RPH LF+D P
Sbjct:    8 ERNQDATVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADYAIKIMNMIKLYGKPIRVNKASAHNKNLDVGANIFIGNLDPEIDEKLLYDTFSAFGVILQTPKIMRDPDTGNSKGYAFINFASFDASDAAIEAMNGQYLCNRPITVSYAFKKDS-KGERHGSAAERLLAAQNP-------LSQADRPHQLFADAP 215

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BLAST of Ggra7898.t1 vs. uniprot
Match: A0A7L2XT24 (SF3B4 factor (Fragment) n=5 Tax=Euteleostomi TaxID=117571 RepID=A0A7L2XT24_9PASS)

HSP 1 Score: 249 bits (637), Expect = 1.070e-77
Identity = 122/216 (56.48%), Postives = 161/216 (74.54%), Query Frame = 0

Query:   74 DRNADATVHIAQLDEKVTDALLWELMVQAAPVRHVYIPRNRITGEHFGYGFCEFHTALDALYAAKVLNLVPLYSKPIRISQSTVDRRTQDVGANLFIGNLVDEVDEKLLHDAFSAFGPLVEAPFIMRDPNTNQSKRYGFVKYSSFEHSDAAIAAMNGQYVCNTPITVQYAFKKDSEKRERHGSQAERILAAKGAEARRTADLENQLRPHTLFSDKP 289
            +RN DATV++  LDEKV++ LLWEL +QA PV + ++P++R+TG+H GYGF EF +  DA YA K++N++ LY KPIR+++++   +  DVGAN+FIGNL  E+DEKLL+D FSAFG +++ P IMRDP+T  SK Y F+ ++SF+ SDAAI AMNGQY+CN PITV YAFKKDS K ERHGS AER+LAA+         L    RPH LF+D P
Sbjct:    8 ERNQDATVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADYAIKIMNMIKLYGKPIRVNKASAHNKNLDVGANIFIGNLDPEIDEKLLYDTFSAFGVILQTPKIMRDPDTGNSKGYAFINFASFDASDAAIEAMNGQYLCNRPITVSYAFKKDS-KGERHGSAAERLLAAQNP-------LSQADRPHQLFADAP 215

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BLAST of Ggra7898.t1 vs. uniprot
Match: A0A7K9HLG2 (SF3B4 factor (Fragment) n=10 Tax=Aves TaxID=8782 RepID=A0A7K9HLG2_9AVES)

HSP 1 Score: 249 bits (637), Expect = 1.100e-77
Identity = 122/216 (56.48%), Postives = 161/216 (74.54%), Query Frame = 0

Query:   74 DRNADATVHIAQLDEKVTDALLWELMVQAAPVRHVYIPRNRITGEHFGYGFCEFHTALDALYAAKVLNLVPLYSKPIRISQSTVDRRTQDVGANLFIGNLVDEVDEKLLHDAFSAFGPLVEAPFIMRDPNTNQSKRYGFVKYSSFEHSDAAIAAMNGQYVCNTPITVQYAFKKDSEKRERHGSQAERILAAKGAEARRTADLENQLRPHTLFSDKP 289
            +RN DATV++  LDEKV++ LLWEL +QA PV + ++P++R+TG+H GYGF EF +  DA YA K++N++ LY KPIR+++++   +  DVGAN+FIGNL  E+DEKLL+D FSAFG +++ P IMRDP+T  SK Y F+ ++SF+ SDAAI AMNGQY+CN PITV YAFKKDS K ERHGS AER+LAA+         L    RPH LF+D P
Sbjct:    8 ERNQDATVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADYAIKIMNMIKLYGKPIRVNKASAHNKNLDVGANIFIGNLDPEIDEKLLYDTFSAFGVILQTPKIMRDPDTGNSKGYAFINFASFDASDAAIEAMNGQYLCNRPITVSYAFKKDS-KGERHGSAAERLLAAQNP-------LSQADRPHQLFADAP 215

The following BLAST results are available for this feature:

BLAST of Ggra7898.t1 vs. uniprot

BLAST of Ggra7898.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A2V3IVS2	4.290e-178	76.81	Splicing factor 3B subunit 4 n=1 Tax=Gracilariopsi...	[more]
R7QBP1	1.230e-113	53.89	Spliceosome associated protein, putative n=1 Tax=C...	[more]
M2XCI3	8.870e-86	60.00	Splicing factor 3B subunit 4 n=1 Tax=Galdieria sul...	[more]
A0A7S1TCY5	1.150e-83	64.62	Hypothetical protein (Fragment) n=1 Tax=Compsopogo...	[more]
A0A7S3AAN1	1.050e-79	62.24	Hypothetical protein n=1 Tax=Rhodosorus marinus Ta...	[more]
splicing factor 3B subunit 4-like n=2 Tax=Centruroides sculpturatus TaxID=218467 RepID=UPI000C6D1086	1.850e-79	57.87	splicing factor 3B subunit 4-like n=2 Tax=Centruro...	[more]
A0A0U9I6N8	6.030e-79	59.72	RNA recognition motif containing protein n=1 Tax=K...	[more]
A0A7K8ASE3	1.040e-77	56.48	SF3B4 factor (Fragment) n=35 Tax=Aves TaxID=8782 R...	[more]
A0A7L2XT24	1.070e-77	56.48	SF3B4 factor (Fragment) n=5 Tax=Euteleostomi TaxID...	[more]
A0A7K9HLG2	1.100e-77	56.48	SF3B4 factor (Fragment) n=10 Tax=Aves TaxID=8782 R...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 167..241 e-value: 4.4E-21 score: 86.0 coord: 80..153 e-value: 9.2E-12 score: 55.1
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 168..238 e-value: 2.5E-16 score: 59.3 coord: 83..148 e-value: 8.5E-9 score: 35.1
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 79..157 score: 10.633075
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 166..245 score: 15.1357
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 71..160 e-value: 1.3E-14 score: 56.1
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 161..257 e-value: 2.9E-23 score: 84.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 272..407
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 299..326
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 336..383
None	No IPR available	PANTHER	PTHR15241	TRANSFORMER-2-RELATED	coord: 72..404
None	No IPR available	PANTHER	PTHR15241:SF330	SPLICING FACTOR 3B SUBUNIT 4	coord: 72..404
IPR034159	SF3B4, RNA recognition motif 2	CDD	cd12335	RRM2_SF3B4	coord: 165..247 e-value: 3.5523E-48 score: 157.071
IPR034158	SF3B4, RNA recognition motif 1	CDD	cd12334	RRM1_SF3B4	coord: 81..154 e-value: 6.0229E-34 score: 119.236
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 79..249

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
tig00000073_pilon	contig	tig00000073_pilon:277228..278451 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria gracilis GNS1m male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Ggra7898.t1	Ggra7898.t1	Gracilaria gracilis GNS1m male	mRNA	tig00000073_pilon 277228..278451 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Ggra7898.t1 ID=Ggra7898.t1|Name=Ggra7898.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=408bp
MAGETAVHQSVFGWKVMSAPGAAKWLRFTGGFSSKSTGREGSKTLFGLKF
DRAALGCSRSTMAATLASNRNPTDRNADATVHIAQLDEKVTDALLWELMV
QAAPVRHVYIPRNRITGEHFGYGFCEFHTALDALYAAKVLNLVPLYSKPI
RISQSTVDRRTQDVGANLFIGNLVDEVDEKLLHDAFSAFGPLVEAPFIMR
DPNTNQSKRYGFVKYSSFEHSDAAIAAMNGQYVCNTPITVQYAFKKDSEK
RERHGSQAERILAAKGAEARRTADLENQLRPHTLFSDKPSRRVQADHPLP
PHPAAPYPPDARMPTYPPPSYAYPPQVRMPPNWTGGVPQQYAQSSQVNHY
PSPNVVAPSQIGWTQNRQYGSSNPANRPAPYPQQSAPNARAARPVPDEAA
PQYMQGR*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR000504	RRM_dom
IPR012677	Nucleotide-bd_a/b_plait_sf
IPR034159	SF3B4_RRM2
IPR034158	SF3B4_RRM1
IPR035979	RBD_domain_sf