Ggra7896.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra7896.t1
Unique NameGgra7896.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length581
Homology
BLAST of Ggra7896.t1 vs. uniprot
Match: A0A2V3IVS5 (Arf-GAP domain and FG repeat-containing protein 2 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IVS5_9FLOR)

HSP 1 Score: 551 bits (1421), Expect = 1.480e-188
Identity = 399/579 (68.91%), Postives = 440/579 (75.99%), Query Frame = 0
Query:    1 MSSRYVSRAAQDAEHALRDVQGRLEGNQFCADCGVPQPDFINLTIGTFICEVCADFHRTSSNRKLKDVFGGDLTLEDVRRMDSVGNDVANRKFLAVWDSREFPEPDRRDRDALREFLWLKYEGIFKKTQASNPP-PQPEP-PR-YYENKGYEAPPERSRRERPMRREHELFRDGPAPPGRAKGYWSSRFGDQRPXXXXXQHMAMPPSEQLRRPREDYYGRPMSAPPYPDRYRTNAPQDRFQPPQPTPVVPYGFPRSSRARYREEAYEDYASNASSRDRERRHSERSSTKPSSQDSYSDLEEERGSRKKKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXE-RYSKKGSKXXXXXXXXXXXXXRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSKRESDL-AKGGKGGPAETS-------EFDLMSEWMGDGKKEENPRPANPAAAGANAVQNIPQAMQQAYQTAQIPMMPPMSMYGSVMPMPGGGFMPMMPPPGXXXXXMGMXGMPPMAPXXX---GMMGGXXXMQNAPGIPQGGGVSGVPGLINGMHNLNMNSRPQPMGPSSVQPPPPXXXLGM 564
            M++RYVSRAAQD EHALRDVQ RLEGNQ+CADCGV  P+FINLTIG+FIC++CADFHRTSSNR++KDVFGGDLT EDVRRMDSVGNDV NRKFLAVWDSREFP PDRRDRDALREFLWLKYEGIFKK QA NPP PQ EP PR YY+N+GYE   ER RRERPMRRE ELFRDGPA P R +GYW+SRFG+ R         +MP  EQ+RRPR+DYY RP +APPYPDRYRT  P +RFQPPQPTPVVPYG PR+SR RYRE+ YE+YASNASSRDRER                             XXXXXXXXXXXXXXX  XXXXXXXXXXXXXX +   +KK SKXXXXXXXXX  XX XXXXXXXX XXXXXXXXXXXXXXXXXXXX   +++ +  + G +G  ++TS       EFDLMSEWMGD K+  N   ANPA  GA + Q+IPQAMQQAYQTAQ+PMMPPMSMYGSVMPMPGGGFMPMM PPG     MGM G      XXX   GMM  XXX        QGGGVSG+PGLINGMHNLNMN R QP+G + + PPPPXXX+GM
Sbjct:    1 MATRYVSRAAQDCEHALRDVQARLEGNQYCADCGVSHPEFINLTIGSFICDLCADFHRTSSNRRIKDVFGGDLTHEDVRRMDSVGNDVVNRKFLAVWDSREFPPPDRRDRDALREFLWLKYEGIFKKNQAPNPPVPQQEPVPRGYYDNRGYEPQLERPRRERPMRREQELFRDGPAQPDRQRGYWASRFGEPR-AAQQPHPPSMPYPEQMRRPRDDYYERPANAPPYPDRYRTGGPHERFQPPQPTPVVPYGLPRNSRPRYREDVYEEYASNASSRDRERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYVXXXXXXXXXXXXXXEQDSRTKKSSKXXXXXXXXXGKXXXXXXXXXXXGXXXXXXXXXXXXXXXXXXXXSSRRKDRETNSMGAEGAGSQTSLTPPVKSEFDLMSEWMGDSKEAVNLAKANPAPGGAPSAQSIPQAMQQAYQTAQMPMMPPMSMYGSVMPMPGGGFMPMMAPPGMMPPPMGMPGXXXXXXXXXXXPGMMXXXXXXXXXXXXXQGGGVSGMPGLINGMHNLNMNPRAQPIGATQI-PPPPXXXMGM 577          
BLAST of Ggra7896.t1 vs. uniprot
Match: R7QDH1 (Arf-GAP domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QDH1_CHOCR)

HSP 1 Score: 288 bits (736), Expect = 4.890e-85
Identity = 277/635 (43.62%), Postives = 335/635 (52.76%), Query Frame = 0
Query:   17 LRDVQGRLEGNQFCADCGVPQPDFINLTIGTFICEVCADFHRTSSNRKLKDVFGGDLTLEDVRRMDSVGNDVANRKFLAVWDSREFPEPDRRDRDALREFLWLKYEGIFKKTQASNPPP-----------------QPEPPRYYENKGYEAPPERSRRERPMRREHELFRDGPAPPGRAKGYWSSRF----GDQRPXXXXXQHMAMPPSEQLRRPREDYYGRPMSAPPYPDRYRTNAPQDRFQPPQPTPVVP-YGFPRSSRARYREEA--YEDYASNASS-RDRERRHSERSSTKPSSQDSYSDLEEE--------RGSRKKKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXERYSKKGSKXXXXXXXXXXXXXRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSKRES--DLAKGGKGGPAETSEFDLMSEWMGDGKKEENPRPANPAAAGANAVQNIPQAMQQAYQTAQIPMM-PPMSMYGSVMPMPGGGFMPMMPP--PGXXXXXMGMXGMPPMA---------------------------------------------PXXXGMMGGXXXMQNAPGIPQGGGVSGVP----GLINGMHNLNMNSRPQPMGPSSVQPPPPXXXLGM 564
            +RD Q R EGN +CADC  P+P++INLTIGT+IC++CA  HR  S R++KD++ GDLT +D  RMD+VGNDVANRKFLA W+ RE PEPDRRD+DAL EF+WLKY+G FKK  A+  PP                 +P+ P YY+++    P ERS    P  RE +LFRD P P   ++GYW+SR+    G +RPXXXXX              R+DYY      PPYPDRYR+ APQDRFQP  P  V P +G P  S  RY+E+   YEDY S AS  RD  RR   R+  +  +Q+  +D +EE         G R K                                  R  KKG K   XXXXXXXXX  XX     XXXXXXXXXXXXXXXXXXX        +   ++     G PA+T +FDLMSEWMGD K  +  R  N ++  A     IP AMQQAY T Q+P+M PPMSMYG +MPMPGGG+MPMM P  P      MGM GM  M                                               XXX MMG    M     +P GGG++G P    GL+NGM NLNM   PQ   P     PP XXX+GM
Sbjct:   82 VRDAQQRQEGNLYCADCAHPRPEYINLTIGTYICDLCAQVHRQISKRRIKDIYAGDLTPQDAHRMDAVGNDVANRKFLATWNPREVPEPDRRDKDALHEFIWLKYDGSFKKQPAAPAPPAQSHRSAPAPRPSAAPYRPDDP-YYDHR----PEERSA---PYGRERDLFRDHPPPSKPSRGYWTSRYEAPPGPRRPXXXXXXXXX----------RDDYY-----RPPYPDRYRSAAPQDRFQPQHPALVPPPFGRPGRSLRRYQEQGAPYEDYGSGASDDRDDPRRRGSRARRRAVNQEYATDSDEEVAESFRXXXGGRSK----------VERNGYYSDEEDGFADDEQPKKEXRRDKKGKKGKSXXXXXXXXXYXXXAQIDVXXXXXXXXXXXXXXXXXXXDSVRTPSVDGLDEMTAPRPGQPAKT-DFDLMSEWMGDSKDTDASR-GNVSSPSAGP---IPAAMQQAYAT-QVPVMAPPMSMYGGMMPMPGGGYMPMMAPGMPSGFMPRMGMPGMGGMPGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAXXXXXXXXXXXXXXXXXMMG----MPGPSAVP-GGGMAGQPPQMHGLLNGMQNLNMQPVPQNANPQ----PPXXXXVGM 668          
BLAST of Ggra7896.t1 vs. uniprot
Match: A0A2V3IL90 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IL90_9FLOR)

HSP 1 Score: 134 bits (338), Expect = 7.650e-34
Identity = 70/97 (72.16%), Postives = 79/97 (81.44%), Query Frame = 0
Query:   86 NDVANRKFLAVWDSREFPEPDRRDRDALREFLWLKYEGIFKKTQASNPPP-QPEPPR-YYENKGYEAPPERSRRERPMRREHELFRDGPAPPGRAKG 180
            +DVAN+ FLAVWDSREF EPD+RDR+ LRE LWLKY+  F K Q  NPPP QP+  R  Y++ GYEAP ERSRRE PMRREH+LFRDGPAPPGRAKG
Sbjct:   29 SDVANQTFLAVWDSREFLEPDKRDREGLRELLWLKYKCKFCKNQVPNPPPPQPKSSRSLYDDIGYEAPYERSRREHPMRREHKLFRDGPAPPGRAKG 125          
BLAST of Ggra7896.t1 vs. uniprot
Match: A0A5J4Z8V6 (Arf-GAP domain and FG repeat-containing protein 1 n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z8V6_PORPP)

HSP 1 Score: 125 bits (314), Expect = 7.140e-27
Identity = 58/125 (46.40%), Postives = 81/125 (64.80%), Query Frame = 0
Query:   11 QDAEHALRDVQGRLEGNQFCADCGVPQPDFINLTIGTFICEVCADFHRTSSNRKLKDVFGGDLTLEDVRRMDSVGNDVANRKFLAVWDSREFPEPDRRDRDALREFLWLKYEGIFKKTQASNPPP 135
            ++AE  +R +  RLE N  CADCG   P F+NLTIGTF+C VCAD H+  + R++K++      +ED   +++ GN VAN  +LA W+ REFPEP   DR A++EFLWLKY+G +   +   P P
Sbjct:    8 EEAERLIRGMT-RLEENAHCADCGARDPTFVNLTIGTFVCSVCADEHK-DARRRVKNIETATFMMEDAEFLEARGNAVANMHYLAKWNPREFPEPKPGDRAAIKEFLWLKYDGSWASKEGMRPKP 130          
BLAST of Ggra7896.t1 vs. uniprot
Match: R7QBH2 (Arf-GAP domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QBH2_CHOCR)

HSP 1 Score: 123 bits (309), Expect = 4.460e-26
Identity = 50/123 (40.65%), Postives = 82/123 (66.67%), Query Frame = 0
Query:    1 MSSRYVSRAAQDAEHALRDVQGRLEGNQFCADCGVPQPDFINLTIGTFICEVCADFHRTSSNRKLKDVFGGDLTLEDVRRMDSVGNDVANRKFLAVWDSREFPEPDRRDRDALREFLWLKYEG 123
            M+ R   R A+DAE  LR +  R  GN++CADCG   P+ + L +GTF+C +CA  HR +S + ++++     +++D  RM+  GND+A R+++A W  +++PEP   D++ +REF+WLKY+G
Sbjct:    1 MARRVSPREAEDAERKLRQLS-RAGGNRYCADCGASSPNHVVLALGTFVCPLCAGIHRDASRKGVRNIDSATFSMDDAYRMEDRGNDLARRRWMARWSPKDYPEPQPGDKETIREFIWLKYDG 122          
BLAST of Ggra7896.t1 vs. uniprot
Match: A0A2V3J4X9 (Arf-GAP domain and FG repeat-containing protein 2 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J4X9_9FLOR)

HSP 1 Score: 122 bits (307), Expect = 8.320e-26
Identity = 51/134 (38.06%), Postives = 86/134 (64.18%), Query Frame = 0
Query:    1 MSSRYVSRAAQDAEHALRDVQGRLEGNQFCADCGVPQPDFINLTIGTFICEVCADFHRTSSNRKLKDVFGGDLTLEDVRRMDSVGNDVANRKFLAVWDSREFPEPDRRDRDALREFLWLKYEGIFKKTQASNPP 134
            M+ R  +R A+DAE  +R +  R   N++CADCG   P+++ L++GTF+C +CA  HR ++ R ++++     +++D  RM   GND+A ++++A W  R+FPEP   D + +REF+WLKY+G +     + PP
Sbjct:    1 MARRISAREAEDAERKIRQLC-RSGANRYCADCGDSSPNYVVLSLGTFVCSICAGIHRDANRRGVRNIDSATFSIDDAYRMHDRGNDLARKRWMARWSPRDFPEPPPGDTERIREFIWLKYDGSWASKNMTAPP 133          
BLAST of Ggra7896.t1 vs. uniprot
Match: A0A7S1TFS6 (Hypothetical protein (Fragment) n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1TFS6_9RHOD)

HSP 1 Score: 109 bits (273), Expect = 5.250e-22
Identity = 55/124 (44.35%), Postives = 71/124 (57.26%), Query Frame = 0
Query:   18 RDVQGRL-------EGNQFCADCGVPQPDFINLTIGTFICEVCADFHRTSSNRKLKDVFGGDLTLEDVRRMDSVGNDVANRKFLAVWDSREFPEPDRRDRDALREFLWLKYEGIFKKTQASNPP 134
            R+V GRL       E N FCADC    P       G  +CE CA  HR  + RK K    G++T+EDV+R++SVGND  NRKFL+ WDS+ FP P       ++EF+WLKYEG + K +    P
Sbjct:    7 REVDGRLRNAVLRDEANGFCADCFRKGPSQFCFHYGILLCETCAKVHR-DAKRKCKPTASGEMTMEDVQRLESVGNDRCNRKFLSRWDSKTFPPPTPGSEKQVQEFIWLKYEGSWLKKKEEKMP 129          
BLAST of Ggra7896.t1 vs. uniprot
Match: A0A7S3A5H2 (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3A5H2_9RHOD)

HSP 1 Score: 85.5 bits (210), Expect = 1.070e-14
Identity = 43/126 (34.13%), Postives = 73/126 (57.94%), Query Frame = 0
Query:    9 AAQDAEHALRDVQGRLE--GNQFCADCGVPQPDFINLTIGTFICEVCADFHRTSSNRKLKDVFGGDLTLEDVRRMDSVGNDVANRKFLAVWDSREFPEPD-RRDRDALREFLWLKYEGIFKKTQAS 131
            A +  E A R +   L    N  CA+CG  +    NLT+G F+C VCA  H    NR+++ +    +++ED  R+  +GN  +  K++A ++ R++ EP+    +DA++EF+WLKYEG ++   A+
Sbjct:    2 AGRGGEEAFRIIDEELRDPANNHCAECG-GESTHANLTLGIFVCSVCAGIHA-DMNRRIRSLGQDYISVEDAMRLVDIGNARSRMKWMAKYNPRDYDEPEPSTSKDAIKEFIWLKYEGNWEGDPAT 125          
BLAST of Ggra7896.t1 vs. uniprot
Match: A0A7S3A7C4 (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3A7C4_9RHOD)

HSP 1 Score: 85.5 bits (210), Expect = 1.700e-14
Identity = 43/126 (34.13%), Postives = 73/126 (57.94%), Query Frame = 0
Query:    9 AAQDAEHALRDVQGRLE--GNQFCADCGVPQPDFINLTIGTFICEVCADFHRTSSNRKLKDVFGGDLTLEDVRRMDSVGNDVANRKFLAVWDSREFPEPD-RRDRDALREFLWLKYEGIFKKTQAS 131
            A +  E A R +   L    N  CA+CG  +    NLT+G F+C VCA  H    NR+++ +    +++ED  R+  +GN  +  K++A ++ R++ EP+    +DA++EF+WLKYEG ++   A+
Sbjct:    2 AGRGGEEAFRIIDEELRDPANNHCAECG-GESTHANLTLGIFVCSVCAGIHA-DMNRRIRSLGQDYISVEDAMRLVDIGNARSRMKWMAKYNPRDYDEPEPSTSKDAIKEFIWLKYEGNWEGDPAT 125          
BLAST of Ggra7896.t1 vs. uniprot
Match: A0A7S0G5H6 (Hypothetical protein (Fragment) n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0G5H6_9RHOD)

HSP 1 Score: 83.2 bits (204), Expect = 2.470e-14
Identity = 41/126 (32.54%), Postives = 73/126 (57.94%), Query Frame = 0
Query:    9 AAQDAEHALRDVQGRLE--GNQFCADCGVPQPDFINLTIGTFICEVCADFHRTSSNRKLKDVFGGDLTLEDVRRMDSVGNDVANRKFLAVWDSREFPEPD-RRDRDALREFLWLKYEGIFKKTQAS 131
            A ++ E A R +   L    N  CA+CG  +    NLT+G F+C VCA  H    NR+++ +    +++ D  R+  +GN  +  K++A ++ R++ EP+    +D+++EF+WLKYEG ++   A+
Sbjct:    2 AGREGEEAFRIIDNELRDPANNHCAECG-GESTHANLTLGIFVCPVCAGIHA-DMNRRVRSLHQDYMSVGDAMRLVDIGNARSRMKWMAKYNPRDYEEPEPSTPKDSIKEFIWLKYEGNWEGDPAT 125          
The following BLAST results are available for this feature:
BLAST of Ggra7896.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IVS51.480e-18868.91Arf-GAP domain and FG repeat-containing protein 2 ... [more]
R7QDH14.890e-8543.62Arf-GAP domain-containing protein n=1 Tax=Chondrus... [more]
A0A2V3IL907.650e-3472.16Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A5J4Z8V67.140e-2746.40Arf-GAP domain and FG repeat-containing protein 1 ... [more]
R7QBH24.460e-2640.65Arf-GAP domain-containing protein n=1 Tax=Chondrus... [more]
A0A2V3J4X98.320e-2638.06Arf-GAP domain and FG repeat-containing protein 2 ... [more]
A0A7S1TFS65.250e-2244.35Hypothetical protein (Fragment) n=1 Tax=Compsopogo... [more]
A0A7S3A5H21.070e-1434.13Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
A0A7S3A7C41.700e-1434.13Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
A0A7S0G5H62.470e-1432.54Hypothetical protein (Fragment) n=1 Tax=Rhodosorus... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001164Arf GTPase activating proteinSMARTSM00105arf_gap_3coord: 14..139
e-value: 2.4E-5
score: 20.5
IPR001164Arf GTPase activating proteinPFAMPF01412ArfGapcoord: 19..123
e-value: 1.8E-17
score: 63.5
IPR001164Arf GTPase activating proteinPROSITEPS50115ARFGAPcoord: 11..122
score: 14.013042
IPR038508ArfGAP domain superfamilyGENE3D1.10.220.150Arf GTPase activating proteincoord: 5..131
e-value: 8.1E-21
score: 76.4
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 128..443
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 147..172
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 254..285
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 380..402
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 537..580
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 549..580
IPR037278ARFGAP/RecO-like zinc fingerSUPERFAMILY57863ArfGap/RecO-like zinc fingercoord: 23..122

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000073_piloncontigtig00000073_pilon:273095..274837 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra7896.t1Ggra7896.t1Gracilaria gracilis GNS1m malemRNAtig00000073_pilon 273095..274837 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra7896.t1 ID=Ggra7896.t1|Name=Ggra7896.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=581bp
MSSRYVSRAAQDAEHALRDVQGRLEGNQFCADCGVPQPDFINLTIGTFIC
EVCADFHRTSSNRKLKDVFGGDLTLEDVRRMDSVGNDVANRKFLAVWDSR
EFPEPDRRDRDALREFLWLKYEGIFKKTQASNPPPQPEPPRYYENKGYEA
PPERSRRERPMRREHELFRDGPAPPGRAKGYWSSRFGDQRPPPPPPQHMA
MPPSEQLRRPREDYYGRPMSAPPYPDRYRTNAPQDRFQPPQPTPVVPYGF
PRSSRARYREEAYEDYASNASSRDRERRHSERSSTKPSSQDSYSDLEEER
GSRKKKSTKERSKGRRKKSELVDSDEYENDEYEEDDREERYSKKGSKKSK
KKSSKDGRSKRKEEEYEENGAYDDEDFSSDEEERGRKSKKKTSKRESDLA
KGGKGGPAETSEFDLMSEWMGDGKKEENPRPANPAAAGANAVQNIPQAMQ
QAYQTAQIPMMPPMSMYGSVMPMPGGGFMPMMPPPGMMPPPMGMPGMPPM
APMPPGMMGGMPPMQNAPGIPQGGGVSGVPGLINGMHNLNMNSRPQPMGP
SSVQPPPPPPPLGMPAGPPPGPPPDPPAMS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001164ArfGAP_dom
IPR038508ArfGAP_dom_sf
IPR037278ARFGAP/RecO