Ggra7874.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra7874.t1
Unique NameGgra7874.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length188
Homology
BLAST of Ggra7874.t1 vs. uniprot
Match: A0A2V3IW20 (54S ribosomal protein L51, mitochondrial n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IW20_9FLOR)

HSP 1 Score: 278 bits (712), Expect = 2.270e-93
Identity = 131/187 (70.05%), Postives = 161/187 (86.10%), Query Frame = 0
Query:    1 MARNGVWELREVLLRYCANSGSSRGVREFVEHGLVNFATKNPQIQFRTQIRGGHPCVFGKYITGYDRQRSLKNLSAEEVGEVLQLVRDTLGRRVPTHNEVGIGVVEKQVVSVQGVWRNQANMNLPETADTLDLREKRRQKYSIESLIDKYGMTGVVKMTQDLLENREQMRLAALEAMPKKERVMPTE 187
            MARNG+WELREVLLRYCA+SGSSRGVREFVEH L++FA KN QIQF+T+I+GGHPCV+ KY+TGY+RQRSLKN+SAEEVG++ QL+RDTLGRRVP HNE G GVVEK  VSVQGVWRN+    LPET + L+LR++R + YS+E ++D++G+ G V+MTQ LLE RE++ LAAL  MPKKERV+PTE
Sbjct:    1 MARNGIWELREVLLRYCASSGSSRGVREFVEHDLISFAAKNSQIQFQTKIQGGHPCVYAKYVTGYERQRSLKNMSAEEVGQIFQLLRDTLGRRVPAHNEFGTGVVEKTGVSVQGVWRNRPEFALPETNEMLELRKRRHRDYSVERVVDEFGLEGFVRMTQKLLEQREKVHLAALAEMPKKERVVPTE 187          
BLAST of Ggra7874.t1 vs. uniprot
Match: R7QME5 (L51_S25_CI-B8 domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QME5_CHOCR)

HSP 1 Score: 237 bits (604), Expect = 6.220e-77
Identity = 112/187 (59.89%), Postives = 145/187 (77.54%), Query Frame = 0
Query:    1 MARNGVWELREVLLRYCANSGSSRGVREFVEHGLVNFATKNPQIQFRTQIRGGHPCVFGKYITGYDRQRSLKNLSAEEVGEVLQLVRDTLGRRVPTHNEVGIGVVEKQVVSVQGVWRNQANMNLPETADTLDLREKRRQKYSIESLIDKYGMTGVVKMTQDLLENREQMRLAALEAMPKKERVMPTE 187
            MAR GVWEL EV++RYCA+SGSSRG+REFV   L +FA +NPQI F+T+IRGGHPCVFGKYITGY+R  +LKNLS E++G+V   +R+TLGR+VP HNE+ IGVVEK   SVQG WRN A +   E  +   LRE+RRQ+Y ++S+ID  G+TG+V++TQ LLE +E  + AAL+A PK E++  TE
Sbjct:    1 MARRGVWELNEVIVRYCASSGSSRGIREFVAKDLADFAERNPQITFKTEIRGGHPCVFGKYITGYERSITLKNLSPEKIGDVFTYLRNTLGRKVPKHNEISIGVVEKNQESVQGFWRNSATLLEKELPEVTQLRERRRQEYGLQSMIDDVGVTGIVRITQKLLERQEMAKQAALDAEPKVEKIRATE 187          
BLAST of Ggra7874.t1 vs. uniprot
Match: A0A1X6P6K6 (L51_S25_CI-B8 domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6P6K6_PORUM)

HSP 1 Score: 120 bits (302), Expect = 7.680e-31
Identity = 68/172 (39.53%), Postives = 98/172 (56.98%), Query Frame = 0
Query:    1 MARNGVWELREVLLRYCANSGSSRGVREFVEHGLVNFATKNPQIQFRTQIRGGHPCVFGKYITGYDRQRSLKNLSAEEVGEVLQLVRDTLGRRVPTHNEVGIGVVEKQVVSVQGVWRNQA-NMNLPETADTLDLREK-RRQKYSIESLIDKYGMTGVVKMTQDLLENREQMR 170
            MAR GV+ELR+VLLRY    GSS GVR FVE  L+ +A  +P ++  TQ+  GHP V G+Y+TGY+RQ  LKNLS  +V      +R+TLGR VP H  V  GV   +  S+QG+W   A +  +P     +  R +        ++L+ + G+ G +++   L   +E  R
Sbjct:    1 MARRGVFELRQVLLRYELAGGSSAGVRSFVEADLIPWARDHPFVRVETQVHRGHPNVIGQYVTGYERQLGLKNLSRVDVAARFAYLRNTLGRVVPLHRRVRSGVTSSRNRSIQGMWHTPAGDPRVPPLPVEVAARARVAAVGLDADTLVQELGLEGFLRLLDRLAAEKEAAR 172          
BLAST of Ggra7874.t1 vs. uniprot
Match: A0A7S1CP68 (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CP68_9STRA)

HSP 1 Score: 106 bits (265), Expect = 2.960e-26
Identity = 58/117 (49.57%), Postives = 70/117 (59.83%), Query Frame = 0
Query:    1 MARNGVWELREVLLRYCANSGSSRGVREFVEHGLVNFATKNPQIQFRTQIRGG-HPCVFGKYITGYDRQRSLKNLSAEEVGEVLQLVRDTLGRRVPTHNEVGIGVVEKQVVSVQGVW 116
            M   GVW+L+E+ LRYC +SGSS GVREF+  GLV FA  NPQ+  RT +R   HP   G Y+ G  +   LKN  AE VG VLQ +RD  GR+V  H+      V     SVQGVW
Sbjct:    9 MCTRGVWQLKELTLRYCRSSGSSAGVREFMRDGLVEFARTNPQLTVRTVVRPNRHPNAIGDYLNGNTKVTDLKNKDAEAVGAVLQRLRDDGGRKVQRHHVP----VRSSAPSVQGVW 121          
BLAST of Ggra7874.t1 vs. uniprot
Match: A0A5J4YV13 (54S ribosomal protein L51, mitochondrial n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YV13_PORPP)

HSP 1 Score: 107 bits (266), Expect = 1.880e-25
Identity = 60/160 (37.50%), Postives = 91/160 (56.88%), Query Frame = 0
Query:    1 MARNGVWELREVLLRYCANSGSSRGVREFVEHGLVNFATKNPQIQFRTQIR-GGHPCVFGKYITGYDRQRSLKNLSAEEVGEVLQLVRDTLGRRVPTHNEVGIGVVEKQVVSVQGVWRN-QANMNLPETADTLDLREKRRQKYSIESLIDKYGMTGVVKM 158
            MAR GVW+L  VL+RYC N GSSRGVR+++   LV++A  NP     T++R G HP V G Y   Y R  +LKN+  E+V E L  +R+TLG +VP H  +  G+ E   +   G+ R+ +A+++ P  A    +    ++  +   L D+ G  G+  +
Sbjct:    1 MARRGVWDLERVLIRYCTNGGSSRGVRDYIRMELVDWAKANPSFNIETKVRIGAHPRVLGVYRNRYMRVLNLKNMDLEQVKEQLAYLRNTLGHKVPRHKRIIKGIFESDGIIHTGMQRSVRADVDNPALA----ILRTFQKDCTFSQLKDELGCFGMATL 156          
BLAST of Ggra7874.t1 vs. uniprot
Match: A0A0P1AJE9 (Mitochondrial/chloroplast ribosomal protein 36a n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AJE9_PLAHL)

HSP 1 Score: 90.5 bits (223), Expect = 4.800e-20
Identity = 50/128 (39.06%), Postives = 81/128 (63.28%), Query Frame = 0
Query:    1 MARNGVWELREVLLRYCANSGSSRGVREFVEHGLVN-FATKNPQIQFRTQIRGG-HPCVFGKYITGYDRQRSLKNLSAEEVGEVLQLVRDTLGRRVPTHNEVGIGVVEKQVVSVQGVWRNQANMNLPE 126
            MA  GVW+L++V +RYC +SGSSR VR+ +     + F  +NPQ+ F+T+++G  HP + G+Y+T   +   +KN     + + LQ +RD+ GR++ TH  +   V+ K++ SVQG+W  Q  +N PE
Sbjct:    1 MATKGVWQLKQVTIRYCQHSGSSRYVRQLLSDDRFHKFVEENPQVHFKTELKGARHPILVGEYVTNQRKVSDIKNQDINFIMKQLQRLRDSSGRKM-TH--IKKPVISKRI-SVQGIW--QPTLNFPE 122          
BLAST of Ggra7874.t1 vs. uniprot
Match: A0A024G7B8 (L51_S25_CI-B8 domain-containing protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024G7B8_9STRA)

HSP 1 Score: 89.0 bits (219), Expect = 1.850e-19
Identity = 49/128 (38.28%), Postives = 79/128 (61.72%), Query Frame = 0
Query:    1 MARNGVWELREVLLRYCANSGSSRGVREFVEHG-LVNFATKNPQIQFRTQIRGG-HPCVFGKYITGYDRQRSLKNLSAEEVGEVLQLVRDTLGRRVPTHNEVGIGVVEKQVVSVQGVWRNQANMNLPE 126
            MA  G+W+L+EV +RYC +SGSSR VR+F+ +   + F  +NPQ+ FRT+++ G HP + G Y+T   +   +KN   + +   LQ +RD+ GR++    ++   V+ K   S+QG+W  Q +M  PE
Sbjct:    1 MATRGIWQLKEVTIRYCQHSGSSRHVRDFLSNKQFLEFVKENPQVSFRTELKPGRHPVLIGDYVTNQQKVCDVKNKEQKVIMLQLQRLRDSSGRKM---TKMKRPVITK-CPSIQGIW--QQDMQFPE 122          
BLAST of Ggra7874.t1 vs. uniprot
Match: F0WUQ8 (Uncharacterized protein AlNc14C277G10065 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WUQ8_9STRA)

HSP 1 Score: 87.4 bits (215), Expect = 7.310e-19
Identity = 46/128 (35.94%), Postives = 79/128 (61.72%), Query Frame = 0
Query:    1 MARNGVWELREVLLRYCANSGSSRGVREFVEHG-LVNFATKNPQIQFRTQIRGG-HPCVFGKYITGYDRQRSLKNLSAEEVGEVLQLVRDTLGRRVPTHNEVGIGVVEKQVVSVQGVWRNQANMNLPE 126
            MA  G+W+L+E+ +RYC +SGSSR +R+F+ +   ++F  +NPQ+ FRT+++ G HP + G Y+T   +   +KN   + +   LQ +RD+ GR++         ++ K+  S+QG+W  Q +M  PE
Sbjct:    1 MATRGIWQLKELTIRYCQHSGSSRYIRDFLNNKKFIDFVKENPQVAFRTELKPGRHPVLIGDYVTNEQKVCDVKNKEEKWIMLQLQRLRDSSGRKMTRMKRP---IISKRP-SIQGIW--QQDMRFPE 122          
BLAST of Ggra7874.t1 vs. uniprot
Match: A0A5A8CBI6 (L51_S25_CI-B8 domain-containing protein n=2 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8CBI6_CAFRO)

HSP 1 Score: 85.9 bits (211), Expect = 2.740e-18
Identity = 45/117 (38.46%), Postives = 66/117 (56.41%), Query Frame = 0
Query:    1 MARNGVWELREVLLRYCANSGSSRGVREFVEHGLVNFATKNPQIQFRTQIRGGHPCVF-GKYITGYDRQRSLKNLSAEEVGEVLQLVRDTLGRRVPTHNEVGIGVVEKQVVSVQGVW 116
            M   GVW+L+++ +R+CA+SG S G REF+   L  FA  NPQ++   + R   P +  GKY+ G +RQ  + N+SA EV      +RD  GR+V    E     V+    S+QG+W
Sbjct:    1 MCSKGVWQLKQLTVRFCAHSGGSAGTREFLRTELAAFAEANPQLEVAAEGRSNRPALLRGKYVCGSERQVEVSNMSASEVLAAASALRDQTGRKVTRVREN----VKSSSPSIQGMW 113          
BLAST of Ggra7874.t1 vs. uniprot
Match: A0A225WRY3 (L51_S25_CI-B8 domain-containing protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225WRY3_9STRA)

HSP 1 Score: 84.3 bits (207), Expect = 1.170e-17
Identity = 44/128 (34.38%), Postives = 81/128 (63.28%), Query Frame = 0
Query:    1 MARNGVWELREVLLRYCANSGSSRGVREFV-EHGLVNFATKNPQIQFRTQIRGG-HPCVFGKYITGYDRQRSLKNLSAEEVGEVLQLVRDTLGRRVPTHNEVGIGVVEKQVVSVQGVWRNQANMNLPE 126
            MA  GVW+L++V +RYC + GSSR VR+ + +   + F  +NPQ+QF T+++G  HP + G Y+T   +   +KN     + + L+ +R++ GR++ TH +  + + ++Q  ++QG+W  Q +++ PE
Sbjct:    1 MATRGVWQLKQVTIRYCQHGGSSRYVRQLLGDERFIKFVEENPQVQFETELKGARHPVLIGDYVTNERKVSDIKNQDVPFIMKQLERLRNSSGRKM-THIKKPV-ITKRQ--TIQGIW--QPDLDFPE 122          
The following BLAST results are available for this feature:
BLAST of Ggra7874.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IW202.270e-9370.0554S ribosomal protein L51, mitochondrial n=1 Tax=G... [more]
R7QME56.220e-7759.89L51_S25_CI-B8 domain-containing protein n=1 Tax=Ch... [more]
A0A1X6P6K67.680e-3139.53L51_S25_CI-B8 domain-containing protein n=1 Tax=Po... [more]
A0A7S1CP682.960e-2649.57Hypothetical protein n=1 Tax=Bicosoecida sp. CB-20... [more]
A0A5J4YV131.880e-2537.5054S ribosomal protein L51, mitochondrial n=1 Tax=P... [more]
A0A0P1AJE94.800e-2039.06Mitochondrial/chloroplast ribosomal protein 36a n=... [more]
A0A024G7B81.850e-1938.28L51_S25_CI-B8 domain-containing protein n=1 Tax=Al... [more]
F0WUQ87.310e-1935.94Uncharacterized protein AlNc14C277G10065 n=1 Tax=A... [more]
A0A5A8CBI62.740e-1838.46L51_S25_CI-B8 domain-containing protein n=2 Tax=Ca... [more]
A0A225WRY31.170e-1734.38L51_S25_CI-B8 domain-containing protein n=1 Tax=Ph... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007741Ribosomal protein/NADH dehydrogenase domainSMARTSM00916L51_S25_CI_B8_2coord: 18..90
e-value: 4.2E-16
score: 69.5
IPR007741Ribosomal protein/NADH dehydrogenase domainPFAMPF05047L51_S25_CI-B8coord: 26..75
e-value: 6.1E-8
score: 32.4
NoneNo IPR availableGENE3D3.40.30.10Glutaredoxincoord: 1..141
e-value: 3.1E-34
score: 119.8
IPR03992739S ribosomal protein L43/54S ribosomal protein L51PANTHERPTHR2139639S RIBOSOMAL PROTEIN L43coord: 1..119
IPR036249Thioredoxin-like superfamilySUPERFAMILY52833Thioredoxin-likecoord: 9..88

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000073_piloncontigtig00000073_pilon:210042..210774 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra7874.t1Ggra7874.t1Gracilaria gracilis GNS1m malemRNAtig00000073_pilon 210042..210774 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra7874.t1 ID=Ggra7874.t1|Name=Ggra7874.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=188bp
MARNGVWELREVLLRYCANSGSSRGVREFVEHGLVNFATKNPQIQFRTQI
RGGHPCVFGKYITGYDRQRSLKNLSAEEVGEVLQLVRDTLGRRVPTHNEV
GIGVVEKQVVSVQGVWRNQANMNLPETADTLDLREKRRQKYSIESLIDKY
GMTGVVKMTQDLLENREQMRLAALEAMPKKERVMPTE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007741Ribosome/NADH_DH
IPR039927MRPL43/MRPL51
IPR036249Thioredoxin-like_sf