Ggra7844.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra7844.t1
Unique NameGgra7844.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length184
Homology
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BLAST of Ggra7844.t1 vs. uniprot
Match: A0A2V3IYV0 (Two-component response regulator-like APRR7 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IYV0_9FLOR)

HSP 1 Score: 108 bits (269), Expect = 6.350e-27
Identity = 78/152 (51.32%), Postives = 91/152 (59.87%), Query Frame = 0 
Query:    1 MALYAHPRPALPTAQDIELASALVSMKTGC-VFYTPLTQPSAPVAITTPS---ILPDDTPPXXXXXXXXXXXXXXXXXXXXTTGVRGGRGAALPAVRYDAERRRDAIERYRRKRQRRSAGKATSIRYQIRKKLADTRPRFRGRFFKIADDHA 148
            MAL+ HP  ALPTAQDIELASALVSMK G    Y   + PS P    + S   +LP + PPXXXX                    R  R ++LP   YD  +R+ AI+RYR KR+RR A  A SIRYQIRKKLADTRPR RGRFFK++   A
Sbjct:    1 MALFEHPLSALPTAQDIELASALVSMKAGWRAPYVSSSTPSKPALTVSTSPTHVLPSEAPPXXXX-------------------ARLPRSSSLPPAPYDYAQRQQAIQRYREKRRRRGAVGANSIRYQIRKKLADTRPRVRGRFFKVSASEA 133
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BLAST of Ggra7844.t1 vs. uniprot
Match: A0A7S1TEN3 (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1TEN3_9RHOD)

HSP 1 Score: 60.1 bits (144), Expect = 3.050e-8
Identity = 40/73 (54.79%), Postives = 46/73 (63.01%), Query Frame = 0 
Query:   92 VRYDAERRRDAIERYRRKRQRRSAGKATSIRYQIRKKLADTRPRFRGRFFKIADDHALEQRAATGA-TSSSPS 163
            VRY  + RR  +ERYR KR++RS  K  +IRY IRKKLADTRPR RGRF K A     E   + GA T   PS
Sbjct:   71 VRYSPQERRLRVERYREKRRQRSFKK--TIRYDIRKKLADTRPRIRGRFSKPAPPEETEALTSEGALTDEKPS 141
The following BLAST results are available for this feature:
BLAST of Ggra7844.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3IYV06.350e-2751.32Two-component response regulator-like APRR7 n=1 Ta... [more]
A0A7S1TEN33.050e-854.79Hypothetical protein n=1 Tax=Compsopogon caeruleus... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR010402CCT domainPFAMPF06203CCTcoord: 99..142
e-value: 1.2E-11
score: 44.5
IPR010402CCT domainPROSITEPS51017CCTcoord: 99..143
score: 10.74457
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 153..183
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 51..74
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 42..183
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 124..149
NoneNo IPR availablePANTHERPTHR31319:SF47SUBFAMILY NOT NAMEDcoord: 83..180
IPR045281Zinc finger protein CONSTANS-likePANTHERPTHR31319ZINC FINGER PROTEIN CONSTANS-LIKE 4coord: 83..180

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000073_piloncontigtig00000073_pilon:134186..134737 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra7844.t1Ggra7844.t1Gracilaria gracilis GNS1m malemRNAtig00000073_pilon 134186..134737 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra7844.t1 ID=Ggra7844.t1|Name=Ggra7844.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=184bp
MALYAHPRPALPTAQDIELASALVSMKTGCVFYTPLTQPSAPVAITTPSI
LPDDTPPPPPPPPPPPPAAPTPAPTPTTTGVRGGRGAALPAVRYDAERRR
DAIERYRRKRQRRSAGKATSIRYQIRKKLADTRPRFRGRFFKIADDHALE
QRAATGATSSSPSSSTSSSPSSSTSSSSPSASS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR010402CCT_domain
IPR045281CONSTANS-like