Ggra7842.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra7842.t1
Unique NameGgra7842.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length445
Homology
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BLAST of Ggra7842.t1 vs. uniprot
Match: A0A2V3IYX2 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IYX2_9FLOR)

HSP 1 Score: 103 bits (258), Expect = 1.440e-20
Identity = 112/391 (28.64%), Postives = 176/391 (45.01%), Query Frame = 0 
Query:   54 SFPVDQLGFLPAHRPIPQPSGLNVSDDFLEMLKANAGQLGDVKVHGAEGVEANGAASTSPMLSRTISEVTMEMLHRTPFANVANNEANGSLSVPNEVA---GNGQQDHDASTISANQMVRQGELMPAPPLQQAVRVPQYGPHNTTAAPQNGVVVSDGRFFPLPLKPRHVHRRLGAQPV--EVKPLSTAEP-RTSQAVAEPSEEIHRVAAVHLHPSGR-PSGALQSARHNNGDKPVHAMPGKGVRGGAVVRRVLKRMARRNPDAQAMLAQMSEEQSNQGSGDVKPELDAEEKRGKKRKIEGVENEXXXXXXXXXXXXXXXXXCRAKQRMRLEKLEEEDRALRSECELMRQMAEVFQAKWKLIAEEYQKICGKDAGECPLVMPTNTELPEVVT 437
            S  + QL F+P       P+  +  D+ + +LK       +      E    N + S SP   RTISEVT+  LH+T +   + N +  +  +P+         +Q H   T     +  +       P  QA R         +  P       D      P +PR        + +     PLS+    + S+    P  EI + A      S   PSG LQ+A+  + D  ++    +  +GGAVV+RVLKR+A+ N +    + ++     +Q    V  +   +EK+ +KR     +NE                 CRAKQ++RLEKLE+E++ALR+EC LM Q+AE  Q  W  +A E+++I GK+AG CPL+MP +  L ++ T
Sbjct:   56 SISLRQLDFVPVDPLTLSPTVWSKHDNTVLLLKPQTNSFLEHSAAQPEYHRQNLSPSESPGADRTISEVTIAGLHQTSYK--SKNVSMNAKPLPSSRTLCFTPQRQLHSMMTNDGTPVAHRNSFGTGLPHPQAGR--------RSIMPWTAEEC-DIPIHTFPSQPRKRTEVTSCRDLWGNASPLSSLHTDKDSRYANVPQPEILQDAGGKFPASALIPSGILQTAQKTHRD--INGERKQAPKGGAVVQRVLKRIAKSNSNISETINRLKVMPMHQH---VSKQTRNDEKQVRKRITTEEKNEEELKKIRRVRNRESVEKCRAKQKLRLEKLEKEEKALRAECILMSQVAESLQRNWAAVAMEFERITGKEAGRCPLIMPPDVGLADMST 430
The following BLAST results are available for this feature:
BLAST of Ggra7842.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IYX21.440e-2028.64Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 299..319
NoneNo IPR availableCOILSCoilCoilcoord: 362..396
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 313..327
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..24
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 305..340
NoneNo IPR availableCDDcd14686bZIPcoord: 354..395
e-value: 1.016E-6
score: 43.6881
NoneNo IPR availableSUPERFAMILY57959Leucine zipper domaincoord: 354..404

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000073_piloncontigtig00000073_pilon:128252..129586 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra7842.t1Ggra7842.t1Gracilaria gracilis GNS1m malemRNAtig00000073_pilon 128252..129586 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra7842.t1 ID=Ggra7842.t1|Name=Ggra7842.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=445bp
MSNPNDFFNFEPSPDSPTELANENILRYLNNPSTQDGGLINAPDAGSANT
PPLSFPVDQLGFLPAHRPIPQPSGLNVSDDFLEMLKANAGQLGDVKVHGA
EGVEANGAASTSPMLSRTISEVTMEMLHRTPFANVANNEANGSLSVPNEV
AGNGQQDHDASTISANQMVRQGELMPAPPLQQAVRVPQYGPHNTTAAPQN
GVVVSDGRFFPLPLKPRHVHRRLGAQPVEVKPLSTAEPRTSQAVAEPSEE
IHRVAAVHLHPSGRPSGALQSARHNNGDKPVHAMPGKGVRGGAVVRRVLK
RMARRNPDAQAMLAQMSEEQSNQGSGDVKPELDAEEKRGKKRKIEGVENE
EELKKLRRVRNRESVEKCRAKQRMRLEKLEEEDRALRSECELMRQMAEVF
QAKWKLIAEEYQKICGKDAGECPLVMPTNTELPEVVTLPAGEGS*
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