Ggra7833.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra7833.t1
Unique NameGgra7833.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length1027
Homology
BLAST of Ggra7833.t1 vs. uniprot
Match: A0A2V3IW51 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IW51_9FLOR)

HSP 1 Score: 1268 bits (3281), Expect = 0.000e+0
Identity = 672/936 (71.79%), Postives = 773/936 (82.59%), Query Frame = 0
Query:   96 MRHAEVSTESEDAAALIVAVDAQGALAALFAVAQNAGCERQQLDILAVPLRKRSAPALLRTLFCPDMRVTNAATKALKQISSIECCQISSWMGSIRAALSLTSGNRTSRAVLLRNLLGRLADILHEVVRQSALSTSSSSNDLTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAQSQWSIMRFFQKKRQPKSNT-SASLSRLTSESDASDKASARKSRQNSARSRDVGDSLTELQQLMTAQLHPN----NSLVSAVTESISSAHRFYGGGLNRDQPRISMKRDAATVMYIFERLLSSRITPDLEDRIEVISTLSDIASATFSGQYASSHKIEQVEQYSEAMRFVFVGHGEDIYSMLLSILFRPVRDADANQLNTIIQ-AGIVDLANQMPIPRPRISRFPQNVICLPNMDCTALAGVSCNTLLKQLLKHVPDLCSRRMALMTGTINSAFLHSSEALQRSQDGLSWEVSKIVSAVDSLSVLVTAIPASPELAVEHISREPVTLRLVIETCIRSVSATGRLLAHNAARPSAPKLSDEGTLDSLRSWKALINIMPSSPQWSGTPSYSSSILFLAQAARRAALIAVMQGYRREKRAAGNVDESFRENETYPSTIASGPSTVRTSPVSFDDANGSGSNGLSGSPSGFEVDEENVLTTELHHSVIALLNVPGTNPAEVFFELYRTVVYLYANDLRKQYVLLHDTVIPDFLTEPTATLGMKRGQQGRTFRSRR-GTRESSTQSDEDARGVLVDNIAVDGQLPSRALRRAVMVSEMDLGKYFDVGQPPSLQHLSPHQTGLPPGVHTFEEFSHALAIIIGTLANKTITENFEDPQEAAAMIARDVSRSGSPYLKRIHKRAKSILRRDMLGQDFDWRSLKYEERIRKLEDQVATLRAFLIHGIETGTIGPRKKSFSNLLGSPCTQPNTYTQNEVHEYLCSTSRCFC 1024
            MRHAE+S+E  DAAALIVAVDAQGALAALFAVAQNAGC  Q LD+LAVPLRKRSAP+LLR+LF PDMRVTNAA KALKQISSIECCQIS+WMGSI+AALSL +G+RTSRAVLLRNLLGRLADILHE V+QSAL+  +SSNDL+                                +S+W ++R F++++     T S SLSRLTSESDASD+A  RK R +S R+ D GDS+ ELQQL+  Q+ P      SLVSAVTESISSAHRFYG G + +QPR+S+KRD+ATVMY+ ERLLSSRITP LEDRIEVI+TLSDIASATFSGQYASSH+IEQVE+YS+AM+ VF+ HGE+IYSMLLSILFRPVR +DAN++   +Q AGI DL N + I RPRISRFPQN +C+PNMDCTALA VSCNTLLK  LKH+P+LCSRRM L+TGTINSAFL+SSEALQ+SQDGLSWEVSKIV AVDSLSVLV AIP SP+LAV HISREP+TLRLVIE CIRSVSATGRLLAHN AR SAPKLSDEGT DSLRSW+ALINIMP  PQWSG+PSYSSSILF+AQAARRAAL+AVMQGYRREKR   N+ ESF ENE YPS+IA GPST+RTSPVSFDD NG+G++GLSG  +GFE D++ VLTTE+  ++IALL VPGT+PA VFFELYRT++YLY  DL+KQ   + +    +F++EPTAT    R   GR+ RSR  G RE STQSDEDA+GVLVDNIAVDGQLPSRALRRAVM SE+DLGKYFD+GQPP+LQHLSPHQTGLPPG HTFEE S ALAIII  LA+K IT+NFE P EAAAMI+RDV+RSGSPYL+RIH+RAKSILRRDM GQDFDWRSL+YEERIRKLE QVA L+AFLIH IE G+ GPRK+SF  LLG+   + ++  Q+++HEYLCS SRCFC
Sbjct:    1 MRHAELSSEPADAAALIVAVDAQGALAALFAVAQNAGCNPQHLDLLAVPLRKRSAPSLLRSLFSPDMRVTNAAVKALKQISSIECCQISTWMGSIQAALSLRTGHRTSRAVLLRNLLGRLADILHEAVKQSALTNIASSNDLSRKRSSRSSFGNLLVRQRPSLSSERRREQRRATRSEWKLIRLFKRRKXXXXXTMSTSLSRLTSESDASDRA-GRKLRHDSNRTGDAGDSVAELQQLLVNQMSPTIPPATSLVSAVTESISSAHRFYGSGFHHEQPRVSLKRDSATVMYVMERLLSSRITPALEDRIEVITTLSDIASATFSGQYASSHRIEQVEEYSDAMKHVFISHGENIYSMLLSILFRPVRKSDANRMGAFLQGAGISDLVNDLSIQRPRISRFPQNAVCMPNMDCTALAAVSCNTLLKLFLKHIPELCSRRMGLITGTINSAFLYSSEALQKSQDGLSWEVSKIVGAVDSLSVLVAAIPESPDLAVAHISREPMTLRLVIENCIRSVSATGRLLAHNGARCSAPKLSDEGTRDSLRSWRALINIMPPGPQWSGSPSYSSSILFIAQAARRAALVAVMQGYRREKRDNSNISESFPENEAYPSSIAPGPSTMRTSPVSFDDTNGNGTSGLSGGAAGFEADDDCVLTTEVDEAIIALLTVPGTDPAAVFFELYRTLIYLYGYDLKKQSYHMQERAPSNFVSEPTATRNGTRTHFGRSLRSRSYGLREISTQSDEDAKGVLVDNIAVDGQLPSRALRRAVMASELDLGKYFDIGQPPTLQHLSPHQTGLPPGAHTFEELSQALAIIISALASKAITDNFEGPHEAAAMISRDVNRSGSPYLQRIHERAKSILRRDMNGQDFDWRSLRYEERIRKLEAQVAGLKAFLIHSIEIGSFGPRKRSFPKLLGAQSHEKSSVNQDQIHEYLCSPSRCFC 935          
The following BLAST results are available for this feature:
BLAST of Ggra7833.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IW510.000e+071.79Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 18..41
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 280..325
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 303..318
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 692..728
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 692..731
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 805..827
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 280..302

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000073_piloncontigtig00000073_pilon:81074..84154 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra7833.t1Ggra7833.t1Gracilaria gracilis GNS1m malemRNAtig00000073_pilon 81074..84154 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra7833.t1 ID=Ggra7833.t1|Name=Ggra7833.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=1027bp
MGLSTPCTALPRNPATDLRRLQQAVDRLDAVEARHREEAARFVYDTCVYH
VRRTLKSHPARPNRGHGRREPPTLSYVFDIVYPYINRIARRLDRAMRHAE
VSTESEDAAALIVAVDAQGALAALFAVAQNAGCERQQLDILAVPLRKRSA
PALLRTLFCPDMRVTNAATKALKQISSIECCQISSWMGSIRAALSLTSGN
RTSRAVLLRNLLGRLADILHEVVRQSALSTSSSSNDLTRKRSSRSSFGNL
LVKQRRSLSSERRREQRRAAQSQWSIMRFFQKKRQPKSNTSASLSRLTSE
SDASDKASARKSRQNSARSRDVGDSLTELQQLMTAQLHPNNSLVSAVTES
ISSAHRFYGGGLNRDQPRISMKRDAATVMYIFERLLSSRITPDLEDRIEV
ISTLSDIASATFSGQYASSHKIEQVEQYSEAMRFVFVGHGEDIYSMLLSI
LFRPVRDADANQLNTIIQAGIVDLANQMPIPRPRISRFPQNVICLPNMDC
TALAGVSCNTLLKQLLKHVPDLCSRRMALMTGTINSAFLHSSEALQRSQD
GLSWEVSKIVSAVDSLSVLVTAIPASPELAVEHISREPVTLRLVIETCIR
SVSATGRLLAHNAARPSAPKLSDEGTLDSLRSWKALINIMPSSPQWSGTP
SYSSSILFLAQAARRAALIAVMQGYRREKRAAGNVDESFRENETYPSTIA
SGPSTVRTSPVSFDDANGSGSNGLSGSPSGFEVDEENVLTTELHHSVIAL
LNVPGTNPAEVFFELYRTVVYLYANDLRKQYVLLHDTVIPDFLTEPTATL
GMKRGQQGRTFRSRRGTRESSTQSDEDARGVLVDNIAVDGQLPSRALRRA
VMVSEMDLGKYFDVGQPPSLQHLSPHQTGLPPGVHTFEEFSHALAIIIGT
LANKTITENFEDPQEAAAMIARDVSRSGSPYLKRIHKRAKSILRRDMLGQ
DFDWRSLKYEERIRKLEDQVATLRAFLIHGIETGTIGPRKKSFSNLLGSP
CTQPNTYTQNEVHEYLCSTSRCFCVK*
back to top