Ggra7824.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra7824.t1
Unique NameGgra7824.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length342
Homology
BLAST of Ggra7824.t1 vs. uniprot
Match: A0A2V3J537 (Flavohemoprotein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J537_9FLOR)

HSP 1 Score: 411 bits (1057), Expect = 6.550e-141
Identity = 217/339 (64.01%), Postives = 261/339 (76.99%), Query Frame = 0
Query:    1 MALPYRRPHRASLLEPETEAVIKRTLPIFTKNSKDISVQLYANLFEQYPQLKPMFSLEFLQTPAQCKSSPAVSMSPQAKILSDSIVNFCANLDNIDAMQNAVERICAKHVSRHVKSDHYPAVATAFSNAARQVLGDQLSEDELKAWDSAVMALAGVLIKTEQKMYDLLKSNDRYWEGFRAFAVEGSEEQASPAGGTASRQVYKMCPNDGGKLPKYLAGESICVRVKHDDYGLVHCGVSLCARERKGELQVSIPVRSSSSKGASSESVLKEKLEEGYAVEVSSPMANLLKKQKSGKSSMNAQSRMARHDYVRVRETNTMAGVIMRGHAAGGPSRQHKRTD 339
            MAL  R+P  ++L++PETEA+IK TLPIFTK+S+ I+VQLYANLFEQ+PQLKPMF LEFLQTP QCK SP   MSPQAKILSDSIVNFCANLDNID M NA+ERICAKHVSRHVKSDHYPAVA AFS A RQVL ++LSE +LKAWD+AV ALAGVL+K E++MYD LK  DR+W+GFR F+V+ SE     A G ASR+VY M  +DG KLP+ + GESICVRV+H+++GLVH G+ L  R  K E+ VS+P  ++SSK  SS SV+KEKLEEG+ VE+SSPMA L  K K GKS    QSR  +HD  RV+E + + GVI RG    G  RQ +R +
Sbjct:    7 MALRMRKPKGSALIDPETEALIKNTLPIFTKHSQQIAVQLYANLFEQHPQLKPMFCLEFLQTPGQCKKSPGTGMSPQAKILSDSIVNFCANLDNIDMMNNAIERICAKHVSRHVKSDHYPAVAGAFSRAVRQVLKNELSESDLKAWDTAVSALAGVLVKAEKEMYDCLKHGDRHWKGFREFSVQPSEAGQPTAAGNASRKVYAMSASDGSKLPRIVPGESICVRVQHEEFGLVHYGLHLVGRPNKTEIHVSLPGNATSSK-TSSHSVVKEKLEEGHHVELSSPMAYLTSK-KRGKS---VQSRALKHDLTRVQEASRLPGVITRGQTTKGVQRQVRRME 340          
BLAST of Ggra7824.t1 vs. uniprot
Match: R7Q9J3 (Flavohemoglobinprotein Hemoglobin-like protein putative Nitric oxide dioxygenase n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q9J3_CHOCR)

HSP 1 Score: 187 bits (475), Expect = 1.210e-52
Identity = 103/300 (34.33%), Postives = 182/300 (60.67%), Query Frame = 0
Query:   14 LEPETEAVIKRTLPIFTKNSKDISVQLYANLFEQYPQLKPMFSLEFLQTPAQCKSSPA------VSMSPQAKILSDSIVNFCANLDNIDAMQNAVERICAKHVSRHVKSDHYPAVATAFSNAARQVLGDQLSEDELKAWDSAVMALAGVLIKTEQKMYDLLKSNDRYWEGFRAFAVEGSEEQASPAGGTASRQVYKMCPNDGGKLPKYLAGESICVRVKHDDYGLVHCGVSLCARERKG----------ELQVSIPVRSSSSKG-ASSESVLKEKLEEGYAVEVSSPMANLLKKQKSGKS 296
            L   T +++  +LP F  NSK+I++++Y  +F   P LK +FSL+FL   ++  S P       + +S QA+IL+DSI++FCAN++N++A    + RIC+KHVSR V+++HY  VA  FS A +QV+GD++SE+E  AWD AV+ LA  LIK E+++Y+ L+++   W+GFR+F V     + +P   T+   V  + P D  K+ ++++G+ +C+R +  +YG VH  + LC                E+Q++IP + +      ++++V+ + ++ G  +++S+P+   ++  K  KS
Sbjct:   23 LAESTLSLVVSSLPTFKANSKEIAIEMYRRIFHVAPSLKSLFSLDFLSVRSKSSSCPMSHHKLDIEISAQAQILADSILSFCANVNNMEAFNPVLTRICSKHVSRSVQAEHYVVVAKCFSEAVQQVIGDKISEEERGAWDKAVLFLADKLIKREKEIYERLETSAGAWKGFRSFQVS----KINPVQNTSGISVV-LTPKDHEKVAEFVSGQYVCLRAQTPEYGPVHRNIPLCPITESSLSSESPLSSYEVQLTIPAKKNDVDCLVNTDAVVFQHMKGGGEIQISAPVGGFVQHAKFAKS 317          
BLAST of Ggra7824.t1 vs. uniprot
Match: A0A6T6C583 (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A6T6C583_9RHOD)

HSP 1 Score: 119 bits (297), Expect = 2.800e-27
Identity = 90/304 (29.61%), Postives = 151/304 (49.67%), Query Frame = 0
Query:    8 PHRASLLEPETEAVIKRTLPIFTKNSKDISVQLYANLFEQYPQLKPMFSLEFLQT-PAQC--------------------KSSPAVSM---SPQAKILSDSIVNFCANLDNIDAMQNAVERICAKHVSRHVKSDHYPAVATAFSNAARQVLGDQLSEDELKAWDSAVMALAGVLIKTEQKMYDLLKSNDRYWEGFRAFAVEGSEEQASPAGGTASRQVYKMCPNDGGKLPKYLAGESICVRVKHDDYGLV--HCGVSLCARERKGELQVSIPVRSSSSKGA-SSESVLKEKLEEGYAVEVSSPM 284
            P+ +  L P+  +  K     F K  +DI+ ++Y  +F  +P+++ +FSLEF++  P++C                    +S+PA S    S QA  L+++I+ FC ++D++D  + +V++IC  HV R V++ HYP +  A   A ++V G Q+++  L A++    AL+ VLI  E +M   L      WEGFR F +   ++ A   GG   +    +   D   + KY  G+ ICVR    + GL+     +S  ++        S  V  S SK A  +  +L E  + GY +EVS P+
Sbjct:    6 PNASERLSPKAISATKELASTFHKFGEDIATRMYELMFSAHPEMRHLFSLEFMRDGPSKCPILADSVRSDEDVDSDTSSLRSAPADSAQRPSLQATKLANTIMKFCTSIDSLDQFEGSVDKICKTHVMRGVEAFHYPNLQKALIQAIKEVGGPQVADQNLIAFEKTFGALSEVLIGREIQMRKALAKIAGGWEGFRPFTIVDRQD-AKEGGG---KMYITIESQDRAPVIKYAQGQDICVRWDDSERGLIVKRYRLSPVSKNYDPRCCYSFVVSRSLSKAAVGATDLLLEYGQIGYEIEVSPPI 305          
BLAST of Ggra7824.t1 vs. uniprot
Match: A0A7S1TAC7 (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1TAC7_9RHOD)

HSP 1 Score: 118 bits (296), Expect = 3.670e-27
Identity = 73/252 (28.97%), Postives = 121/252 (48.02%), Query Frame = 0
Query:    6 RRPHRASLLEPETEAVIKRTLPIFTKNSKDISVQLYANLFEQYPQLKPMFSLEFL-----------QTPAQCKSSPAVSMSP-------------QAKILSDSIVNFCANLDNIDAMQNAVERICAKHVSRHVKSDHYPAVATAFSNAARQVLGDQLSEDELKAWDSAVMALAGVLIKTEQKMYDLLKSNDRYWEGFRAFAVEGSEEQASPAGGTASRQVYKMCPNDGGKLPKYLAGESICVRVKHDDYGLV 233
            R P     + P+  A  K   P+F K+  +I+ ++Y  LF ++P L+ +FSLEF+           QT     S+ + +  P             QA  L++SI+NFC ++D++D  + +V+RI   HV R +  +HYP +  A   + + + G       L A++ +   L+ VLI  E +M   LK     WEGFR F +   ++ A   GG   +    M   DG  + K++ G+ +C+R    + GLV
Sbjct:    2 RSPSSNGRVNPKVVAATKELSPVFEKHGDEIATRMYDLLFTEHPDLRHLFSLEFMRDSPSKHPILKQTDDSDHSNESTASCPFLGALDSAQRPSLQASKLANSIMNFCTHIDDLDQFETSVDRITRTHVMRGIHQEHYPYLQKALIQSIKDIAGLDAKHHVLFAFEKSFSVLSDVLIGRELQMRKALKKQHGGWEGFRLFTIVDRQD-AKEGGG---KMYITMESEDGAPVIKFVEGQDVCIRWDDPEQGLV 249          
BLAST of Ggra7824.t1 vs. uniprot
Match: NO-inducible flavohemoprotein n=1 Tax=Luteolibacter sp. NBU1238 TaxID=2776705 RepID=UPI00186754AE (NO-inducible flavohemoprotein n=1 Tax=Luteolibacter sp. NBU1238 TaxID=2776705 RepID=UPI00186754AE)

HSP 1 Score: 116 bits (290), Expect = 1.030e-25
Identity = 67/239 (28.03%), Postives = 116/239 (48.54%), Query Frame = 0
Query:   14 LEPETEAVIKRTLPIFTKNSKDISVQLYANLFEQYPQLKPMFSLEFLQTPAQCKSSPAVSMSPQAKILSDSIVNFCANLDNIDAMQNAVERICAKHVSRHVKSDHYPAVATAFSNAARQVLGDQLSEDELKAWDSAVMALAGVLIKTEQKMYDLLKSNDRYWEGFRAFAVEGSEEQASPAGGTASRQVYKMCPNDGGKLPKYLAGESICVRVKHDDYGLVHCGVSLCARERKGELQVSI 252
            L   T +V+K T P+  K+ ++++   Y  +F + P+++P+F+     T  Q   +       Q + L+ +I  F AN+D ++ +  AVERI  KH    +  +HYP V +    + R+VLG+  +++ + AW  A   LA +LI  E  +Y +   N+  W GF+ F V G E ++             + P DGGK+P Y  G+ + VR    + G      SL +       ++S+
Sbjct:    9 LSERTISVVKSTAPVLEKHGEELTRHFYERMFRENPEVRPLFN-----TSNQAGGT-------QQRALAGAICAFAANVDQLEVLGAAVERIAQKHAGLRILPEHYPIVGSNLLASIREVLGEGATDEVIDAWAEAYGFLAEILIGRESHIYTIQARNEHGWNGFKPFRVVGKERESDVI------VSILLKPADGGKVPTYKPGQYLTVRFPDGEGGTTMRNYSLSSAPHPDHFRISV 229          
BLAST of Ggra7824.t1 vs. uniprot
Match: A0A0M2M0V1 (GLOBIN domain-containing protein n=31 Tax=Bacteria TaxID=2 RepID=A0A0M2M0V1_9SPHN)

HSP 1 Score: 109 bits (273), Expect = 1.210e-25
Identity = 59/153 (38.56%), Postives = 90/153 (58.82%), Query Frame = 0
Query:   14 LEPETEAVIKRTLPIFTKNSKDISVQLYANLFEQYPQLKPMFSLEFLQTPAQCKSSPAVSMSPQAKILSDSIVNFCANLDNIDAMQNAVERICAKHVSRHVKSDHYPAVATAFSNAARQVLGDQLSEDELKAWDSAVMALAGVLIKTEQKMYD 166
            L PET A++K T P   ++  DI+ ++Y  LF   P++K +F +   ++ AQ K             L+ +I+ F  N+D +DA++ A+ERI A+HV  H+KS+HYPAVA A   A R VLG+  ++D L AW  A   LA +LI  E ++Y+
Sbjct:    5 LSPETMALVKATAPALQQHGVDITTRMYQRLFVD-PEIKALFDMAAHESGAQPKR------------LAAAILAFAQNVDKLDALKPAIERIAARHVETHIKSEHYPAVANALLPAIRDVLGEAATDDILNAWGEAYWFLADILINREVELYE 144          
BLAST of Ggra7824.t1 vs. uniprot
Match: A0A245ZFH4 (Bacterial hemoglobin n=1 Tax=Sphingomonas mucosissima TaxID=370959 RepID=A0A245ZFH4_9SPHN)

HSP 1 Score: 108 bits (271), Expect = 2.370e-25
Identity = 57/155 (36.77%), Postives = 90/155 (58.06%), Query Frame = 0
Query:   11 ASLLEPETEAVIKRTLPIFTKNSKDISVQLYANLFEQYPQLKPMFSLEFLQTPAQCKSSPAVSMSPQAKILSDSIVNFCANLDNIDAMQNAVERICAKHVSRHVKSDHYPAVATAFSNAARQVLGDQLSEDELKAWDSAVMALAGVLIKTEQKMY 165
            A  L P+T  ++K T P   ++  +I+ ++Y  LF   P++K +F +   ++ AQ K             L+ +I+ F  N+D +D ++ A+ERICA+HV  H+KS+HYPAVA A   A R +LGD  S++ L+AW  A   LA +LI  E ++Y
Sbjct:    2 AKPLSPQTMTIVKSTAPALQQHGVEITTRMYQRLFVD-PEIKALFDMAAHESGAQPKR------------LAAAILAFAQNVDKLDVLKPAIERICARHVETHIKSEHYPAVANALLPAIRDILGDVASDEILQAWGEAYWFLADILINREAELY 143          
BLAST of Ggra7824.t1 vs. uniprot
Match: globin domain-containing protein n=1 Tax=Pseudomonas psychrotolerans TaxID=237610 RepID=UPI0015E48A16 (globin domain-containing protein n=1 Tax=Pseudomonas psychrotolerans TaxID=237610 RepID=UPI0015E48A16)

HSP 1 Score: 108 bits (269), Expect = 4.380e-25
Identity = 60/152 (39.47%), Postives = 85/152 (55.92%), Query Frame = 0
Query:   14 LEPETEAVIKRTLPIFTKNSKDISVQLYANLFEQYPQLKPMFSLEFLQTPAQCKSSPAVSMSPQAKILSDSIVNFCANLDNIDAMQNAVERICAKHVSRHVKSDHYPAVATAFSNAARQVLGDQLSEDELKAWDSAVMALAGVLIKTEQKMY 165
            L PE  A+IK T P+  K+  +I+ ++Y  LF   P++K +F               A     Q K L+ +I+ F  N+D IDA+Q A++ ICA+HV  HVK++HYPAVA A   A + VLGD  + D L AW  A   LA  +IK E+ +Y
Sbjct:    4 LSPEIIAIIKSTAPVLQKHGVEITTRMYERLFVD-PEIKSLFD------------EAAHRSGEQPKRLAAAILAFANNVDRIDAIQGAIDSICARHVVTHVKAEHYPAVANALLPAIKDVLGDAATNDILNAWGEAYWYLANQMIKQERSLY 142          
BLAST of Ggra7824.t1 vs. uniprot
Match: A0A7M1AYT6 (GLOBIN domain-containing protein n=3 Tax=Sulfurimonas TaxID=202746 RepID=A0A7M1AYT6_9PROT)

HSP 1 Score: 107 bits (266), Expect = 1.130e-24
Identity = 56/152 (36.84%), Postives = 87/152 (57.24%), Query Frame = 0
Query:   14 LEPETEAVIKRTLPIFTKNSKDISVQLYANLFEQYPQLKPMFSLEFLQTPAQCKSSPAVSMSPQAKILSDSIVNFCANLDNIDAMQNAVERICAKHVSRHVKSDHYPAVATAFSNAARQVLGDQLSEDELKAWDSAVMALAGVLIKTEQKMY 165
            L  ET   +K+T+P+  KN++ I+ ++Y  LF +YP+ KP+F               A + S Q K L+ +I  F AN+DN+DA+  AVE++   HV   VK +HYP VA A   A   VLGD  +++  +AW  A   LA +L++ E+++Y
Sbjct:    3 LSQETVTAVKKTIPLVGKNAEKITTRMYEILFSKYPETKPLF---------------ANAQSDQHKKLAGAIAAFAANIDNLDALSAAVEKMANTHVQTKVKPEHYPMVADALITAMGDVLGDDFTDEYKQAWVEAYTFLANILMQREKELY 139          
BLAST of Ggra7824.t1 vs. uniprot
Match: N2IVI4 (GLOBIN domain-containing protein n=7 Tax=Pseudomonas TaxID=286 RepID=N2IVI4_9PSED)

HSP 1 Score: 107 bits (266), Expect = 1.230e-24
Identity = 56/152 (36.84%), Postives = 86/152 (56.58%), Query Frame = 0
Query:   14 LEPETEAVIKRTLPIFTKNSKDISVQLYANLFEQYPQLKPMFSLEFLQTPAQCKSSPAVSMSPQAKILSDSIVNFCANLDNIDAMQNAVERICAKHVSRHVKSDHYPAVATAFSNAARQVLGDQLSEDELKAWDSAVMALAGVLIKTEQKMY 165
            L PET A++K T P+  ++   I+ ++Y  LF   P++K +F               A     Q K L+ +I+ F  N D ++A+Q AV++ICA+HV+ H+K +HYPAVA A   A R VLGD  +++ L AW  A   LA ++I  E+ +Y
Sbjct:    5 LSPETIAIVKSTAPVLQEHGVAITTRMYERLFVD-PEIKALFD------------EAAFKSGEQPKRLAGAILAFAKNADRVEAIQGAVDKICARHVATHIKPEHYPAVANALLPAIRDVLGDAATDEILDAWGKAYWYLADIMINREKTLY 143          
The following BLAST results are available for this feature:
BLAST of Ggra7824.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3J5376.550e-14164.01Flavohemoprotein n=1 Tax=Gracilariopsis chorda Tax... [more]
R7Q9J31.210e-5234.33Flavohemoglobinprotein Hemoglobin-like protein put... [more]
A0A6T6C5832.800e-2729.61Hypothetical protein n=1 Tax=Compsopogon caeruleus... [more]
A0A7S1TAC73.670e-2728.97Hypothetical protein n=1 Tax=Compsopogon caeruleus... [more]
NO-inducible flavohemoprotein n=1 Tax=Luteolibacter sp. NBU1238 TaxID=2776705 RepID=UPI00186754AE1.030e-2528.03NO-inducible flavohemoprotein n=1 Tax=Luteolibacte... [more]
A0A0M2M0V11.210e-2538.56GLOBIN domain-containing protein n=31 Tax=Bacteria... [more]
A0A245ZFH42.370e-2536.77Bacterial hemoglobin n=1 Tax=Sphingomonas mucosiss... [more]
globin domain-containing protein n=1 Tax=Pseudomonas psychrotolerans TaxID=237610 RepID=UPI0015E48A164.380e-2539.47globin domain-containing protein n=1 Tax=Pseudomon... [more]
A0A7M1AYT61.130e-2436.84GLOBIN domain-containing protein n=3 Tax=Sulfurimo... [more]
N2IVI41.230e-2436.84GLOBIN domain-containing protein n=7 Tax=Pseudomon... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR012292Globin/ProtoglobinGENE3D1.10.490.10Globinscoord: 13..167
e-value: 5.5E-37
score: 129.2
IPR000971GlobinPFAMPF00042Globincoord: 20..126
e-value: 4.3E-12
score: 46.6
IPR000971GlobinPROSITEPS01033GLOBINcoord: 11..159
score: 15.978359
NoneNo IPR availableGENE3D2.40.30.10Translation factorscoord: 175..288
e-value: 3.0E-5
score: 26.1
NoneNo IPR availablePANTHERPTHR43396FLAVOHEMOPROTEINcoord: 14..291
IPR023950FlavohemoproteinPANTHERPTHR43396:SF3FLAVOHEMOPROTEINcoord: 14..291
IPR009050Globin-like superfamilySUPERFAMILY46458Globin-likecoord: 11..165

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000073_piloncontigtig00000073_pilon:32158..33183 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra7824.t1Ggra7824.t1Gracilaria gracilis GNS1m malemRNAtig00000073_pilon 32158..33183 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra7824.t1 ID=Ggra7824.t1|Name=Ggra7824.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=342bp
MALPYRRPHRASLLEPETEAVIKRTLPIFTKNSKDISVQLYANLFEQYPQ
LKPMFSLEFLQTPAQCKSSPAVSMSPQAKILSDSIVNFCANLDNIDAMQN
AVERICAKHVSRHVKSDHYPAVATAFSNAARQVLGDQLSEDELKAWDSAV
MALAGVLIKTEQKMYDLLKSNDRYWEGFRAFAVEGSEEQASPAGGTASRQ
VYKMCPNDGGKLPKYLAGESICVRVKHDDYGLVHCGVSLCARERKGELQV
SIPVRSSSSKGASSESVLKEKLEEGYAVEVSSPMANLLKKQKSGKSSMNA
QSRMARHDYVRVRETNTMAGVIMRGHAAGGPSRQHKRTDGK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR012292Globin/Proto
IPR000971Globin
IPR023950Hmp
IPR009050Globin-like_sf