Ggra7819.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Ggra7819.t1
Unique Name	Ggra7819.t1
Type	polypeptide
Organism	Gracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length	250

Homology

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BLAST of Ggra7819.t1 vs. uniprot
Match: A0A2V3J535 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J535_9FLOR)

HSP 1 Score: 265 bits (678), Expect = 3.130e-86
Identity = 149/239 (62.34%), Postives = 178/239 (74.48%), Query Frame = 0

Query:    1 MRGLNLSRLARASEGSFFKDQQAAQAAKIRSTLSRNDINKLRKEQADATPTVDKLASISAQSAYKQLVKNSAQHAPQRQSPSSSLLHRVQTXXXXXXXXXXXXXPSNTLDPTMMRALGSGKLNILADMKSTAPAP-RPLPGSEKYAEGAILGMASFSIATAMVASVGLVGGLFVYFNPSVIDGIRYRTRRFASVIDASIGERIRNRVQRIKESGPLVSDEKRGTVGKLMSGAVGMEPSQ 238
            MRGLNLSRLARASEGSFFKDQQ+ QAA IR++LS+ +I  LR  +    PTVD L+SISAQSAY QLVK S +HAP R S SS L  RVQ               +NTLDP++MR LGSGKLN+LAD+ +  P P RPLPGSEKY EGA+LGMAS SIAT++VASVGL   L VYFNP++ID I+ RT +FA  +DAS+GERIR RVQRIK+ GP++SDEKR  V KLMSGA+G   ++
Sbjct:    1 MRGLNLSRLARASEGSFFKDQQSLQAANIRTSLSKTEIQTLRSTRNKPLPTVDTLSSISAQSAYSQLVKQSHKHAPLRVSSSSQLARRVQRSQSTAFAAHHPAA-ANTLDPSVMRVLGSGKLNVLADISTATPTPQRPLPGSEKYGEGAMLGMASLSIATSIVASVGLAAVLAVYFNPAIIDAIKARTTQFAVAMDASVGERIRQRVQRIKQDGPVLSDEKRQRVRKLMSGALGFSQNE 238

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BLAST of Ggra7819.t1 vs. uniprot
Match: R7QE33 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QE33_CHOCR)

HSP 1 Score: 164 bits (416), Expect = 1.120e-46
Identity = 104/240 (43.33%), Postives = 145/240 (60.42%), Query Frame = 0

Query:    1 MRGLNLSRLA---RASEGSFFKDQQAAQAAKIRSTLSRNDINKLRKEQADATPTVDKLASISAQSAYKQLVKNSAQHAPQRQSPSSSLLHRVQTXXXXXXXXXXXXXPSNTLDPTMMRALGSGKLNILADM-KSTAPAPRPLPGSEKYAEGAILGMASFSIATAMVASVGLVGGLFVYFNPSVIDGIRYRTRRFASVIDASIGERIRNRVQRIKESGPLVSDEKRGTVGKLMSGAVGMEP 236
            MRGLNLSRLA   RASEGSFFKDQQ  QA+K+R++LS  DI    K      P+VD LA IS  SAY+ L+K     AP        L +R+ +                  DP ++RALGS +LNI + + K TA    PLPG+E+Y +GA+LGMASF +AT+ VA+VGL GGL+VYF+P+ +  +R R+  F + +DAS+G R+R   +R++  G ++S++      K+ +  V M P
Sbjct:    1 MRGLNLSRLAARGRASEGSFFKDQQQQQASKLRASLSPADIASA-KSAPTPPPSVDTLAEISGHSAYRTLLKQP--RAPPTAQKPRPLFNRLASAAAAFERKPRPAP--KVADPHVLRALGSSRLNIYSSLPKQTA---MPLPGAERYGDGAVLGMASFGVATSFVAAVGLAGGLYVYFSPTAVQTMRERSVAFGAAVDASLGPRLRRFKERVQSRGAVISEDADTRARKIAASIVKMPP 232

The following BLAST results are available for this feature:

BLAST of Ggra7819.t1 vs. uniprot

BLAST of Ggra7819.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A2V3J535	3.130e-86	62.34	Uncharacterized protein n=1 Tax=Gracilariopsis cho...	[more]
R7QE33	1.120e-46	43.33	Uncharacterized protein n=1 Tax=Chondrus crispus T...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 213..249
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 234..249
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 68..113
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 1..147
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 176..249
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 148..175
None	No IPR available	TMHMM	TMhelix		coord: 157..179

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
tig00000073_pilon	contig	tig00000073_pilon:21015..21764 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria gracilis GNS1m male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Ggra7819.t1	Ggra7819.t1	Gracilaria gracilis GNS1m male	mRNA	tig00000073_pilon 21015..21764 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Ggra7819.t1 ID=Ggra7819.t1|Name=Ggra7819.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=250bp
MRGLNLSRLARASEGSFFKDQQAAQAAKIRSTLSRNDINKLRKEQADATP
TVDKLASISAQSAYKQLVKNSAQHAPQRQSPSSSLLHRVQTSSSASYQVQ
TSSSPSNTLDPTMMRALGSGKLNILADMKSTAPAPRPLPGSEKYAEGAIL
GMASFSIATAMVASVGLVGGLFVYFNPSVIDGIRYRTRRFASVIDASIGE
RIRNRVQRIKESGPLVSDEKRGTVGKLMSGAVGMEPSQQPSSEGDKSVD*