Ggra7816.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra7816.t1
Unique NameGgra7816.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length128
Homology
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BLAST of Ggra7816.t1 vs. uniprot
Match: A0A2V3J579 (DUF1746 domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J579_9FLOR)

HSP 1 Score: 90.1 bits (222), Expect = 3.530e-20
Identity = 49/59 (83.05%), Postives = 56/59 (94.92%), Query Frame = 0 
Query:   60 DDVTSSLRRHTARIRTLKVRAEFEYTLLIVLSVHVVYMYYLDYTLLVFLIRASQLIRLL 118
            D VTS+LR+ TA +RTLKVRAEFEYTLL+VL++HVVYMYYLD+TLLVFLIRASQLIRLL
Sbjct:   51 DHVTSTLRQRTATLRTLKVRAEFEYTLLLVLAIHVVYMYYLDHTLLVFLIRASQLIRLL 109
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BLAST of Ggra7816.t1 vs. uniprot
Match: R7Q3C7 (DUF1746 domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q3C7_CHOCR)

HSP 1 Score: 60.5 bits (145), Expect = 1.950e-8
Identity = 33/57 (57.89%), Postives = 44/57 (77.19%), Query Frame = 0 
Query:   62 VTSSLRRHTARIRTLKVRAEFEYTLLIVLSVHVVYMYYLDYTLLVFLIRASQLIRLL 118
            +  SLR HTAR+R  +VR +FE TL  VL ++V+YMYYLD+ +LV +IRA QL+RLL
Sbjct:   51 LAESLRAHTARLRIARVRGDFEQTLTTVLILNVIYMYYLDHKILVLIIRAFQLMRLL 107
The following BLAST results are available for this feature:
BLAST of Ggra7816.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3J5793.530e-2083.05DUF1746 domain-containing protein n=1 Tax=Gracilar... [more]
R7Q3C71.950e-857.89DUF1746 domain-containing protein n=1 Tax=Chondrus... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..58
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 26..55
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 101..127
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 82..100
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..81
NoneNo IPR availableTMHMMTMhelixcoord: 86..108

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000073_piloncontigtig00000073_pilon:14035..14740 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra7816.t1Ggra7816.t1Gracilaria gracilis GNS1m malemRNAtig00000073_pilon 14035..14740 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra7816.t1 ID=Ggra7816.t1|Name=Ggra7816.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=128bp
MGPHGVPEVASSAVALQLDPADAQQPPDHSVDERLLSDARAQPSREHDDH
GARQQAAALDDVTSSLRRHTARIRTLKVRAEFEYTLLIVLSVHVVYMYYL
DYTLLVFLIRASQLIRLLPNDIHQLHR*
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