Ggra7815.t1 (polypeptide) Gracilaria gracilis GNS1m male
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Overview
Homology
BLAST of Ggra7815.t1 vs. uniprot
Match: A0A2V3J9G3 (Transcription termination factor MTERF2, chloroplastic n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J9G3_9FLOR) HSP 1 Score: 494 bits (1272), Expect = 1.820e-170 Identity = 257/423 (60.76%), Postives = 312/423 (73.76%), Query Frame = 0
Query: 23 CARRPRSTLRCCSAAPATARKRRTARQTPRRAAGAXXXAGADANRRAAQAFLRSLGLSAEQSRRLPARLPQLCRADVAPFAEPTLAXXXXXXXXXXXXXXXXXXXXQIFFRPRQQFAPRLHVLQHVAHIPRANVPPVVAKCPHVLWMHVNNAAAVVHTVVEQCPAMSLTTVGEVFSTVPHALLSAPAAIQHNLHAIRQAGVNDTAGMSRIVAKAPLVLVKDMNKCLSKRLSYLCDELAFPSATVAKILVSTPQLLDWSVEKQLVPKVNLLQSLMGDEYVAAAVHKVPSIFATDDILDRVLWLRDDVGLSEQQVRSVLREAPAILTYSVVGNLAPKWMFIHQTMGASVDDLVAAPREMLCANLQQRAMPRYAFMASSGKRDVSVVDILRGNDGEFCRNVAKCDAKVFRNYVDNDTYLLFFSRLM 445
C RRPR C SAAPA+ K R + + P A D R A F SLGLS E S RLPARLP+LCR+D+ FAEPTLA QIFFRPR++FAPR+ L++VA IP+ N+ V+AKCPHVLWM + NA V TV+E+CP +SL T+ EVF VP L+ P I N+ +IRQAGV+D AG+SRI+ KAPL LV D K L+KRL YL EL F +T+ KILVSTP++L+WSVEK++ PK LLQSL+GD++VAA + VPSI +D+LD VLWLRDDVGLS++QV+ VLREAPA+LTYSVVGNLAPKW FIH+TMGA+V+DLVAAPRE+LCANLQQRAMPRYAF+AS GKRDV+V+D+LRG+D EFC+ VAKCDA+VFR+YVDNDTYLLFFSRLM
Sbjct: 23 CTRRPRVVFHC-SAAPASPEKPRLSGKCPNEA---------DPKREVAVKFFLSLGLSTEASLRLPARLPKLCRSDLPVFAEPTLAFLRSHGLSPRQVARAVRNAPQIFFRPREEFAPRIEFLENVARIPKDNLKSVIAKCPHVLWMDLKNAGMVTETVIEECPRISLKTLSEVFLRVPQVLIVRPNHISANIDSIRQAGVSDAAGLSRIIGKAPLALVYDTKKNLAKRLDYLSGELGFSKSTIGKILVSTPEILEWSVEKKIKPKTALLQSLVGDDHVAAVIETVPSILGVNDVLDPVLWLRDDVGLSDKQVQKVLREAPAVLTYSVVGNLAPKWTFIHETMGATVEDLVAAPREVLCANLQQRAMPRYAFLASHGKRDVAVIDVLRGSDAEFCKEVAKCDAQVFRSYVDNDTYLLFFSRLM 435
BLAST of Ggra7815.t1 vs. uniprot
Match: A0A0D9VU87 (Uncharacterized protein n=1 Tax=Leersia perrieri TaxID=77586 RepID=A0A0D9VU87_9ORYZ) HSP 1 Score: 68.9 bits (167), Expect = 8.840e-10 Identity = 53/178 (29.78%), Postives = 85/178 (47.75%), Query Frame = 0
Query: 248 LSKRLSYLCDELAFPSATVAKILVSTPQLLDWSVEKQLVPKVNLLQSLMGDEYVAAAVHKVP--SIFATDDILDRVLWLRDDVGLSEQQVRSVLREAPAILTYSVVGNLAPKWMFIHQTMGASVDDLVAAPREMLCANLQQRAMPRYAFMASSGKRDVSVVDILRGNDGEFCRNVAKC 423
++ L +L DE P+ + ++L P+LL V +L P + L++L VA H+ S D +L R+ +L D +GL + RS+ R PA+ Y + GN+ PK ++ M D+L P E L R PR+ A+ G R + + +LR D +F +A C
Sbjct: 13 IAAALRFLTDEAGVPADDLPRVLRRRPRLLVSPVAARLRPTLYFLRALG----VADLPHRADLLSFSVEDKLLPRIEFLEDALGLPSRAARSMARRFPALFYYGIEGNMRPKADYLLGEMRRGADELFDFP-ECFSYALATRIAPRHEACAARGVR-MPLPAMLRPGDAKFRATLAGC 184
BLAST of Ggra7815.t1 vs. uniprot
Match: transcription termination factor MTEF1, chloroplastic n=1 Tax=Tarenaya hassleriana TaxID=28532 RepID=UPI0008FD86CD (transcription termination factor MTEF1, chloroplastic n=1 Tax=Tarenaya hassleriana TaxID=28532 RepID=UPI0008FD86CD) HSP 1 Score: 63.2 bits (152), Expect = 2.040e-7 Identity = 50/190 (26.32%), Postives = 90/190 (47.37%), Query Frame = 0
Query: 229 MSRIVAKAPLVLVKDMNKCLSKRLSYLCDELAFPSATVAKILVSTPQLLDWSVEKQLVPKVNLLQSL--MGDEYVAAAVHKVPSIFATDDILDRVLWLRDDVGLSEQQVRSVLREAPAILTYSVVGNLAPKWMFIHQTMGASVDDLVAAPREMLCANLQQRAMPRYAFMASSGKRDVSVVDILRGNDGEF 416
+ RI+ P +L D + + +L DE++ + K + P+LL SV+ QL P + LQSL +G + + + V + ++V + +PAILTYSV NLAPK F + M +V+++ P + +L+++ PR+ + G + + ++L+ +DGEF
Sbjct: 88 VGRILDMFPDLLTSDPEVVILPVIRFLADEISISRFEIPKSISRCPRLLVSSVDFQLRPALAFLQSLGFVGRDAITSRTT-VXXXXXXXXXXXXXXXXXXXXXXTREEVAKMAVRSPAILTYSVHNNLAPKVKFFMEEMSGNVEEIKRFP-QYFSFSLEKKIKPRHRLLKEHGIL-MPLSEMLKVSDGEF 274 The following BLAST results are available for this feature:
BLAST of Ggra7815.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 3
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Ggra7815.t1 ID=Ggra7815.t1|Name=Ggra7815.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=446bpback to top |