Ggra7808.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra7808.t1
Unique NameGgra7808.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length994
Homology
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BLAST of Ggra7808.t1 vs. uniprot
Match: A0A2V3IBZ2 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IBZ2_9FLOR)

HSP 1 Score: 89.7 bits (221), Expect = 1.570e-15
Identity = 58/147 (39.46%), Postives = 76/147 (51.70%), Query Frame = 0 
Query:  649 RVLEARQILRDADIAP-QRVV---RPVPLYFAGMRRGPIGRYRRALTTAIPPWAVLAISFVGRGVGEILTHAAVRDRVVATMKALGFRALEGFDPVTDARYNNQTLTARENRIRNVHACHFRYMRNQDTPNRDAQQWYEAVAARLEA 791
            R+   +  LR A++ P  R      P  LYFA +RRGPIG YRR LT  +P WAVLA+SF+GR   EILTHA  + R+VA+M+ LG   L  +DP         T T     +  +  C  R+ R  +      + WY   A  LEA
Sbjct:   10 RLQATKDALRAANLTPLPRAAGQPNPTALYFANVRRGPIGEYRRILTRFLPGWAVLALSFIGRSTAEILTHAPYQSRLVASMRLLGSTHLPDYDPSKPFPSRRHT-TNEAAPVTAMEQCASRWRRCANGRPPAVRGWYLESAETLEA 155
The following BLAST results are available for this feature:
BLAST of Ggra7808.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IBZ21.570e-1539.46Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 577..591
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 230..298
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 896..931
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 507..545
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 360..382
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..25
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 818..853
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 976..993
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 573..620
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 808..993

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000829_piloncontigtig00000829_pilon:9557..12538 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra7808.t1Ggra7808.t1Gracilaria gracilis GNS1m malemRNAtig00000829_pilon 9557..12538 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra7808.t1 ID=Ggra7808.t1|Name=Ggra7808.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=994bp
MRPRSHSVGVVRTPAKVRKTPAPRAKEKLLKATKLAAKRATERGTNQRRE
IDTRGRAVAPLPTAVVISRSSIGPQGPRTIACTNPPAGTPTKVATRTTKG
AKGEAAPQQVTTELPVLRNATTHARGVCLETARDSVIDAAIDHEVSKAYE
LEGRPEDAGQALMARRNLSGTPAARAETAMADTANAVSTAPTRRGSADTP
ICRRLQEDFDRHAAGTDADAMEVQCTLPDSQHHVKDDANAPAELAAPPNG
HESAAAAHGIGAQHTGPHAHKTPEKGPAQKATFRTIQPLPREPTLQNKLE
QVRESVRCTKCHQPGKWSWTLSPEGVETMAVCHHCDHLVAGDNLKRLIQV
VHGVHAARAATRARPQANGSDRQGAAPAPALTEARRVFKEHFGTIRHVLP
CPGCHTEGTMVLNGYTAKGLEHVAKCSACGRKTTGRRLRELLDTVLPPAA
TETHTPLSSTGNGLDIQREKALLTHVNTLICAQTTRIDARMTTLEDAVKD
MRTELRSGLQGRMVLDHNRHQRPNGPPRPGTSSGGPQMPDAIIGELAHMR
HQIDLLRAENTRLVRYLQTVQAGEVPAPDARPPPRQPQPAPQPERARLAQ
LQQLPRREHRPVPHAGAEPNPLGQRKTWAQIAAQPRTALHDLEQLTQQRV
LEARQILRDADIAPQRVVRPVPLYFAGMRRGPIGRYRRALTTAIPPWAVL
AISFVGRGVGEILTHAAVRDRVVATMKALGFRALEGFDPVTDARYNNQTL
TARENRIRNVHACHFRYMRNQDTPNRDAQQWYEAVAARLEAQYADVFTAE
SRELEAGLRDRLRRQRQDANNPPVSDATTDDPSYVPGNASDPSQSSPPDS
DADTDMPTAQEAGEGGTDADGFTLVTRKRRRSTPKAGRHATEASSGHAER
NSPPTTHTPKRRNTATRVGRPSPTETNANRAQPRHGEPDLPHTMEDTSPP
LGTDPPQTGDGTALGAHARANAKKPGDTGSSPSTSSNHGSQSE*
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