Ggra7795.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Ggra7795.t1
Unique Name	Ggra7795.t1
Type	polypeptide
Organism	Gracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length	210

Homology

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BLAST of Ggra7795.t1 vs. uniprot
Match: A0A2V3IZC6 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IZC6_9FLOR)

HSP 1 Score: 171 bits (434), Expect = 1.910e-50
Identity = 92/202 (45.54%), Postives = 139/202 (68.81%), Query Frame = 0

Query:    1 MYSIPDNIEDEITPNPRPYPTFPSLPPVIYTNHANKLSRAPNRSFATSSDTSSSSLTTALSNSSLQDCSIVSLPPGSETEQNNSYLEFSSLTLYRETVAANIVEKRRKFSNELTEEEQRRGFRVSKYPDPRYLGFAPSADDKRKYLTAMPLASIKSPGCVGCNLPVSPNQKVVLYVFVLIVLLFSAAAGYFFRSMIVGDIVL 202
            M + P   EDEITPNP   P+FP  P ++     ++++  P++S++  ++ SS S  +    S++++ S +SL   S ++  +S  + S ++ Y +TVA NIV K R F+N  T+EE++RGFR+SKYPDPRYLGF PS+ D+RKY+TAMPLA    P C GC LPVS +Q++VL++F+LI+ L +A   YFFR+++VGDIV+
Sbjct:    8 MSAYPAETEDEITPNPNLQPSFPVFPRMLNLTTGSEVTPTPDKSYSPLNEASSHSDFSINDCSTIRESSNLSLQHMSGSDFTDSCYDHSVISSYEQTVAVNIVAKGRFFTNAPTKEERQRGFRLSKYPDPRYLGFVPSSHDRRKYITAMPLAEATPPACTGCYLPVSTSQRIVLFLFILILALLAAGGAYFFRALLVGDIVI 209

The following BLAST results are available for this feature:

BLAST of Ggra7795.t1 vs. uniprot

BLAST of Ggra7795.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A2V3IZC6	1.910e-50	45.54	Uncharacterized protein n=1 Tax=Gracilariopsis cho...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 99..119
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..20
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 172..192
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..171
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 193..209
None	No IPR available	TMHMM	TMhelix		coord: 172..194

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
tig00000088_pilon	contig	tig00000088_pilon:609690..610319 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria gracilis GNS1m male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Ggra7795.t1	Ggra7795.t1	Gracilaria gracilis GNS1m male	mRNA	tig00000088_pilon 609690..610319 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Ggra7795.t1 ID=Ggra7795.t1|Name=Ggra7795.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=210bp
MYSIPDNIEDEITPNPRPYPTFPSLPPVIYTNHANKLSRAPNRSFATSSD
TSSSSLTTALSNSSLQDCSIVSLPPGSETEQNNSYLEFSSLTLYRETVAA
NIVEKRRKFSNELTEEEQRRGFRVSKYPDPRYLGFAPSADDKRKYLTAMP
LASIKSPGCVGCNLPVSPNQKVVLYVFVLIVLLFSAAAGYFFRSMIVGDI
VLRFRAADV*