Ggra7788.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra7788.t1
Unique NameGgra7788.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length212
Homology
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BLAST of Ggra7788.t1 vs. uniprot
Match: A0A2V3IZD3 (BZIP domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IZD3_9FLOR)

HSP 1 Score: 130 bits (326), Expect = 4.240e-33
Identity = 86/103 (83.50%), Postives = 91/103 (88.35%), Query Frame = 0 
Query:  108 VKTEATAVKSDCELSAEPVDKKAARAIRNREAAMKSRVEAKQKMQKLQSENDCLKVKVXXXXXXXXXXXXXXXSLLQHTYGVSVGDGQDVKAVFNMLAPVGCR 210
            VK+E   +KSD E+S EPVDKKAARAIRNREAAM+SRVEAKQKMQKLQ EN+CL VKV XXXXXXXXXXXXXX  LQHTYGVSV DGQDVK VFNMLAPVGCR
Sbjct:  210 VKSEPNTMKSDSEVSCEPVDKKAARAIRNREAAMRSRVEAKQKMQKLQDENNCLNVKVKXXXXXXXXXXXXXXXXLQHTYGVSVADGQDVKEVFNMLAPVGCR 312
The following BLAST results are available for this feature:
BLAST of Ggra7788.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IZD34.240e-3383.50BZIP domain-containing protein n=1 Tax=Gracilariop... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 137..185
NoneNo IPR availableGENE3D1.20.5.170coord: 119..188
e-value: 1.4E-7
score: 33.4
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 22..65
NoneNo IPR availableSUPERFAMILY57959Leucine zipper domaincoord: 128..184
IPR004827Basic-leucine zipper domainSMARTSM00338brlzneucoord: 124..181
e-value: 0.005
score: 23.3
IPR004827Basic-leucine zipper domainPFAMPF07716bZIP_2coord: 132..177
e-value: 4.1E-5
score: 23.6

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000088_piloncontigtig00000088_pilon:585579..588872 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra7788.t1Ggra7788.t1Gracilaria gracilis GNS1m malemRNAtig00000088_pilon 585579..588872 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra7788.t1 ID=Ggra7788.t1|Name=Ggra7788.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=212bp
MELNPTIRAEAGFRFDAAWPGDAALDRSPSPANAAPAVKRSRDAAAMKHK
KRTLPSRAVKTSAPALREAERECAASPWYRPPHQAATIVDDVASVERASN
AVALVWAVKTEATAVKSDCELSAEPVDKKAARAIRNREAAMKSRVEAKQK
MQKLQSENDCLKVKVKSIEDENKALTTQLKSLLQHTYGVSVGDGQDVKAV
FNMLAPVGCRS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004827bZIP