Ggra7787.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra7787.t1
Unique NameGgra7787.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length142
Homology
BLAST of Ggra7787.t1 vs. uniprot
Match: R7QMR8 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QMR8_CHOCR)

HSP 1 Score: 130 bits (328), Expect = 4.640e-36
Identity = 64/95 (67.37%), Postives = 75/95 (78.95%), Query Frame = 0
Query:    1 MQQFNLTEILNELRSRKLRSSFMFLINEIPTDVVPLKPRCPAGSLLEIAMQPVNEDERRLQLFDHAVIRNALTLKESAQPVKMPHWLHVEQSWGD 95
            M QF L ++L+ LRSRK+RSSF   I EI  + VPLKPRCPAGSL EIA+QP+NEDERRL+LFD  V+RNALTLKESA+   +P WL VEQ WGD
Sbjct:   27 MVQFGLGDVLDGLRSRKMRSSFSHYITEIQKENVPLKPRCPAGSLAEIALQPINEDERRLELFDDRVLRNALTLKESAEKPPLPDWLDVEQPWGD 121          
BLAST of Ggra7787.t1 vs. uniprot
Match: A0A1X6P2F7 (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6P2F7_PORUM)

HSP 1 Score: 104 bits (260), Expect = 1.560e-25
Identity = 49/96 (51.04%), Postives = 64/96 (66.67%), Query Frame = 0
Query:    1 MQQFNLTEILNELRSRKLRSSFMFLINEIPTDVVPLKPRCPAGSLLEIAMQPVNEDERRLQLFDHAVIRNALTLKESAQPVKMPHWLHVEQSWGDD 96
            +  + L   L ELRS KLRS+F   + +IP   VP++PRCPAGSL+E+A+ P NEDER L  FD   +R+AL L E   PV MP WL +EQ+W +D
Sbjct:   32 IDSYGLGPALAELRSAKLRSTFAHYLTDIPVADVPVRPRCPAGSLMELALAPANEDERELVPFDERSLRSALVLTEGGPPVPMPEWLSIEQAWDED 127          
BLAST of Ggra7787.t1 vs. uniprot
Match: A0A7S2ZRX0 (Hypothetical protein n=2 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZRX0_9RHOD)

HSP 1 Score: 84.3 bits (207), Expect = 1.030e-17
Identity = 41/100 (41.00%), Postives = 61/100 (61.00%), Query Frame = 0
Query:    1 MQQFNLTEILNELRSR----KLRSSFMFLINEIPTDVVPLKPRCPAGSLLEIAMQPVNEDERRLQLFDHAVIRNALTLKESAQPVKMPHWLHVEQSWGDD 96
            ++ F L + L+EL+      K+RSSF  LI +IP +  P+ P+C AGS+ E+A+QP  EDER  + FD   +R AL L E  +P+  P WL ++Q+   D
Sbjct:   25 LEHFGLRKDLDELKQLAARGKMRSSFSHLIADIPGEDTPINPKCSAGSICEVALQPAAEDERNFEPFDERALRLALVLSEDKEPIPQPAWLKIDQAANGD 124          
The following BLAST results are available for this feature:
BLAST of Ggra7787.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
R7QMR84.640e-3667.37Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A1X6P2F71.560e-2551.04Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
A0A7S2ZRX01.030e-1741.00Hypothetical protein n=2 Tax=Rhodosorus marinus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 79..141
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 115..134

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000088_piloncontigtig00000088_pilon:582731..583156 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra7787.t1Ggra7787.t1Gracilaria gracilis GNS1m malemRNAtig00000088_pilon 582731..583156 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra7787.t1 ID=Ggra7787.t1|Name=Ggra7787.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=142bp
MQQFNLTEILNELRSRKLRSSFMFLINEIPTDVVPLKPRCPAGSLLEIAM
QPVNEDERRLQLFDHAVIRNALTLKESAQPVKMPHWLHVEQSWGDDDRRR
KRRDKKKKRKKKKRKRDADEADGVDASRHDDEERRARKKRK*
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