Ggra7786.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra7786.t1
Unique NameGgra7786.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length164
Homology
BLAST of Ggra7786.t1 vs. uniprot
Match: A0A2V3IZC0 (YlmG-like n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IZC0_9FLOR)

HSP 1 Score: 233 bits (593), Expect = 4.830e-76
Identity = 116/152 (76.32%), Postives = 135/152 (88.82%), Query Frame = 0
Query:    1 MEAVVSFARKRPVMSNRVAAVPIPLLAPKHTRIYRRHVPAVLLPGDSVLESTTIGGTVTFFSIYQNVIVARILLSWFPGLQDNRLLRPLYTVCDPYLNLFRNVVPPIFGLDLSPVLALFVLQAFGSATAALGAEMKPKRTLSRTRGVVNEMR 152
            M  +V+F R+  V+SNRVAA+PIPLLAPKHTRIYRR VPA+L+PG+ VLESTTIGGTVTFFSIYQNVIVARILLSWFPG+Q +RL+RP+ TVCDPYLNLFR+VVPPIFGLDLSPVLALFVLQA GSATAALGAEM  K+   R +G++ ++R
Sbjct:    1 MNHLVNFRRREAVLSNRVAAIPIPLLAPKHTRIYRRDVPAMLIPGNGVLESTTIGGTVTFFSIYQNVIVARILLSWFPGIQGSRLIRPIITVCDPYLNLFRSVVPPIFGLDLSPVLALFVLQALGSATAALGAEMHHKQPTHRPQGLLEQIR 152          
BLAST of Ggra7786.t1 vs. uniprot
Match: R7QMH5 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QMH5_CHOCR)

HSP 1 Score: 174 bits (441), Expect = 1.690e-52
Identity = 91/127 (71.65%), Postives = 105/127 (82.68%), Query Frame = 0
Query:    7 FARKRPV-MSNRVAAVPIPLLAPKHTR-IYRRHVPAVLLPGDSVLESTTIGGTVTFFSIYQNVIVARILLSWFPGLQDNRLLRPLYTVCDPYLNLFRNVVPPIFGLDLSPVLALFVLQAFGSATAAL 131
            F R+R + MS+ VAAVPIP L    TR + RR   AV++PGDSVLESTTIGGTVTFF+IYQNVIVARILLSWFPG+Q N ++RPL TVCDPYLNLFR  VPPIFGLDLSP+LAL +LQAFGS + A+
Sbjct:    5 FLRRRSLRMSSAVAAVPIPFLVRNRTRPLRRRDALAVIIPGDSVLESTTIGGTVTFFNIYQNVIVARILLSWFPGVQSNPIVRPLITVCDPYLNLFRQTVPPIFGLDLSPILALLLLQAFGSVSHAV 131          
BLAST of Ggra7786.t1 vs. uniprot
Match: A0A1X6NYS3 (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NYS3_PORUM)

HSP 1 Score: 147 bits (371), Expect = 4.590e-42
Identity = 73/119 (61.34%), Postives = 88/119 (73.95%), Query Frame = 0
Query:   18 VAAVPIPLLAPKHTRIYR-RHVPAVLLPGDSVLESTTIGGTVTFFSIYQNVIVARILLSWFPGLQDNRLLRPLYTVCDPYLNLFRNVVPPIFGLDLSPVLALFVLQAFGSATAALGAEM 135
            V AVPIP L P  TR+   R V A  +PGDSV+ES T+GG   FF IY N+++AR+LLSWFP  Q+ +LL PLYTVCDP+LN FR V+PPIFGLDLSP++   +L A  SAT ALGAEM
Sbjct:   32 VGAVPIPALVPGRTRVRGGRGVLAAAIPGDSVVESVTVGGFANFFGIYGNLLIARVLLSWFPAAQNVKLLSPLYTVCDPFLNFFRGVIPPIFGLDLSPIIGFTLLNALTSATVALGAEM 150          
BLAST of Ggra7786.t1 vs. uniprot
Match: M2WX31 (YggT family protein n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2WX31_GALSU)

HSP 1 Score: 134 bits (338), Expect = 2.360e-37
Identity = 60/111 (54.05%), Postives = 83/111 (74.77%), Query Frame = 0
Query:   30 HTRIYRRHVPAVLLPGDSVLESTTIGGTVTFFSIYQNVIVARILLSWFPGLQDNRLLRPLYTVCDPYLNLFRNVVPPIFGLDLSPVLALFVLQAFGSATAALGAEMKPKRT 140
            H   +R+ + A +LPGDS++    +GG + FFS+Y N+++ R+LLSWFP  Q+  +LRPL+T+CDPYLNLFR+VVPP+FG+D SP+LA   LQ F +AT ALGAE + K T
Sbjct:   35 HVPCFRKLLLASVLPGDSIVGGVFVGGFLNFFSLYSNLLIVRVLLSWFPAAQNQPILRPLFTLCDPYLNLFRSVVPPVFGIDFSPILAFTALQFFSTATIALGAEDRVKST 145          
BLAST of Ggra7786.t1 vs. uniprot
Match: A0A7S0ZBV6 (Hypothetical protein n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZBV6_9RHOD)

HSP 1 Score: 134 bits (337), Expect = 3.540e-37
Identity = 60/95 (63.16%), Postives = 78/95 (82.11%), Query Frame = 0
Query:   40 AVLLPGDSVLESTTIGGTVTFFSIYQNVIVARILLSWFPGLQDNRLLRPLYTVCDPYLNLFRNVVPPIFGLDLSPVLALFVLQAFGSATAALGAE 134
            A ++PG+S  E+  +GG  TF  +Y N+I ARILLSWFPGLQ+  LLRP+YT+CDP+LN+FR V+PPIFGLDLSP++A+ +LQA GSA+ ALGAE
Sbjct:   42 AAVIPGNSAGEAIVVGGLGTFLGLYSNIITARILLSWFPGLQNQPLLRPIYTICDPFLNVFRGVIPPIFGLDLSPIIAITLLQALGSASFALGAE 136          
BLAST of Ggra7786.t1 vs. uniprot
Match: A0A5J4YWZ1 (YlmG-like protein 2, chloroplastic n=2 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YWZ1_PORPP)

HSP 1 Score: 133 bits (334), Expect = 7.950e-37
Identity = 66/128 (51.56%), Postives = 89/128 (69.53%), Query Frame = 0
Query:   40 AVLLPGDSVLESTTIGGTVTFFSIYQNVIVARILLSWFPGLQDNRLLRPLYTVCDPYLNLFRNVVPPIFGLDLSPVLALFVLQAFGSATAALGAEMKPKRTLSRT-RGV---VNEMRNKVVAIMQARD 163
            + L+PG+S  E   +GG   FFS+Y N++ ARILLSWFPG+Q N ++RP+  VCDP+LN FR ++PPI G+DLSPVLAL  LQ  G+AT  LGAE+ P R+ SR+ RG+   +N+M   V   M  R+
Sbjct:   20 SALIPGNSTGEMVVVGGLANFFSLYGNLVTARILLSWFPGIQGNPIVRPVIQVCDPFLNAFRGIIPPIGGIDLSPVLALITLQVLGNATTTLGAELPPARSASRSPRGIRFDLNQMAMNVRQRMMVRN 147          
BLAST of Ggra7786.t1 vs. uniprot
Match: A0A7S0BUC8 (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0BUC8_9RHOD)

HSP 1 Score: 131 bits (330), Expect = 2.110e-36
Identity = 59/94 (62.77%), Postives = 77/94 (81.91%), Query Frame = 0
Query:   40 AVLLPGDSVLESTTIGGTVTFFSIYQNVIVARILLSWFPGLQDNRLLRPLYTVCDPYLNLFRNVVPPIFGLDLSPVLALFVLQAFGSATAALGA 133
            A ++PGD+V E   + G V FF IYQN+I++RILLSWFP LQ   +L+P+YTVCDP+LN+FR V+PPIFGLDLSP++A+ +LQAF  A+AALGA
Sbjct:   36 AAVIPGDTVAEGFVVTGLVNFFGIYQNLIISRILLSWFPALQRQPILQPIYTVCDPFLNVFRGVIPPIFGLDLSPIIAITLLQAFQGASAALGA 129          
BLAST of Ggra7786.t1 vs. uniprot
Match: A0A1X6NYK2 (Uncharacterized protein n=2 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NYK2_PORUM)

HSP 1 Score: 129 bits (324), Expect = 5.830e-35
Identity = 67/119 (56.30%), Postives = 83/119 (69.75%), Query Frame = 0
Query:   18 VAAVPIPLLAPKHTRIYRRH-VPAVLLPGDSVLESTTIGGTVTFFSIYQNVIVARILLSWFPGLQDNRLLRPLYTVCDPYLNLFRNVVPPIFGLDLSPVLALFVLQAFGSATAALGAEM 135
            V AVPIP L P  TR+     V AV +PG SV+ES T+GG   FF  + N+++A +LLSWFP   + +LL PLYTVCDP+ N FR V+PPIFGLDLSP++   +L A  SATAAL AEM
Sbjct:   32 VGAVPIPTLVPGRTRVRGGWGVLAVAIPGGSVVESVTVGGFANFFGNFGNLLIAGVLLSWFPAAWNFKLLSPLYTVCDPFPNFFRGVIPPIFGLDLSPIIGFTLLNALTSATAALVAEM 150          
BLAST of Ggra7786.t1 vs. uniprot
Match: A0A7S0GLB2 (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0GLB2_9STRA)

HSP 1 Score: 120 bits (301), Expect = 3.640e-31
Identity = 61/121 (50.41%), Postives = 80/121 (66.12%), Query Frame = 0
Query:   16 NRVAAVPIPLLAPKHTRIYRRHVP-AVLLPGDSVLESTTIGGTVTFFSIYQNVIVARILLSWFPGLQDNRLLRPLYTVCDPYLNLFRNVVPPIFGLDLSPVLALFVLQAFGSATAALGAEM 135
            NR +A  I       +R +   VP A+ +PG+ V+E  T+GG   F SIY NVI ARILL+W P  Q   +L+P++ + DPYLNLFR ++PPIFGLDLSP+LA F L   G ATAA+G E+
Sbjct:   54 NRNSASAISSSGSSCSRKFNNRVPLAIAIPGNGVVEQVTVGGLSNFLSIYNNVITARILLTWIPQAQGVAILQPVFQITDPYLNLFRGLIPPIFGLDLSPLLAFFALSVAGQATAAIGHEI 174          
BLAST of Ggra7786.t1 vs. uniprot
Match: L1IP93 (Uncharacterized protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1IP93_GUITC)

HSP 1 Score: 118 bits (296), Expect = 8.210e-31
Identity = 64/139 (46.04%), Postives = 89/139 (64.03%), Query Frame = 0
Query:    1 MEAVVSFARKRPVMSNRVAAVPIPLLAPKHTRIYRRHVPAVLLPGDSVLESTTIGGTVTFFSIYQNVIVARILLSWFPGLQDNRLLRPLYTVCDPYLNLFRNVVPPIFGLDLSPVLALFVLQAFGSATAALGAEMKPKR 139
            M  +V   R   ++++R A  P+     +  +I RR++ AV +PGDSV E   + G   F ++YQN++VAR+LLSWFP  Q    L+PLY VCDPYLN FR ++PPI G+DLSP+LA  +LQ    A  +LGAE  P+R
Sbjct:   14 MATMVQGDRGTTLLAHRHAFTPLS----RSGQIRRRNMCAVAIPGDSVGEEVFVRGFQNFLTLYQNLLVARVLLSWFPSAQSIGALQPLYNVCDPYLNTFRGIIPPIGGIDLSPILAFTLLQVSAGAMVSLGAET-PRR 147          
The following BLAST results are available for this feature:
BLAST of Ggra7786.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IZC04.830e-7676.32YlmG-like n=1 Tax=Gracilariopsis chorda TaxID=4483... [more]
R7QMH51.690e-5271.65Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A1X6NYS34.590e-4261.34Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
M2WX312.360e-3754.05YggT family protein n=1 Tax=Galdieria sulphuraria ... [more]
A0A7S0ZBV63.540e-3763.16Hypothetical protein n=1 Tax=Timspurckia oligopyre... [more]
A0A5J4YWZ17.950e-3751.56YlmG-like protein 2, chloroplastic n=2 Tax=Porphyr... [more]
A0A7S0BUC82.110e-3662.77Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
A0A1X6NYK25.830e-3556.30Uncharacterized protein n=2 Tax=Porphyra umbilical... [more]
A0A7S0GLB23.640e-3150.41Hypothetical protein n=1 Tax=Proboscia inermis Tax... [more]
L1IP938.210e-3146.04Uncharacterized protein n=1 Tax=Guillardia theta (... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003425CCB3/YggTPFAMPF02325YGGTcoord: 59..123
e-value: 1.0E-17
score: 64.2
IPR003425CCB3/YggTPANTHERPTHR33219YLMG HOMOLOG PROTEIN 2, CHLOROPLASTICcoord: 31..140
NoneNo IPR availablePANTHERPTHR33219:SF1YLMG HOMOLOG PROTEIN 2, CHLOROPLASTICcoord: 31..140
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..114
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 115..133
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 134..163

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000088_piloncontigtig00000088_pilon:582006..582678 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra7786.t1Ggra7786.t1Gracilaria gracilis GNS1m malemRNAtig00000088_pilon 582006..582678 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra7786.t1 ID=Ggra7786.t1|Name=Ggra7786.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=164bp
MEAVVSFARKRPVMSNRVAAVPIPLLAPKHTRIYRRHVPAVLLPGDSVLE
STTIGGTVTFFSIYQNVIVARILLSWFPGLQDNRLLRPLYTVCDPYLNLF
RNVVPPIFGLDLSPVLALFVLQAFGSATAALGAEMKPKRTLSRTRGVVNE
MRNKVVAIMQARD*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003425CCB3/YggT