Ggra7782.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra7782.t1
Unique NameGgra7782.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length138
Homology
BLAST of Ggra7782.t1 vs. uniprot
Match: A0A2V3IZH2 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IZH2_9FLOR)

HSP 1 Score: 220 bits (560), Expect = 7.950e-72
Identity = 107/136 (78.68%), Postives = 120/136 (88.24%), Query Frame = 0
Query:    1 MALRSRAAPLLDAANKAETLLTAEGGLRGFVHRMQARVRTGKILRPDVEDDVLRKPVSESKFRYPSPGSQQPPVVPQGPYEHVFNIEYHSRDVRRRHNTEQLDTAPAAATAGLPPTPGTPVQSHFLGMAGDFDRVQ 136
            MALRSR A LL+AANK+E++++AEGGLR FV R++ R+ TGKILRPDV+DDVLR+PVSESKFRYPSPGSQQPPVVPQGPYEHVFNIEYHSRD RRRH  EQ+  + AAATAGLPPT GTP QS FLGMAGDFDR Q
Sbjct:    1 MALRSRTAVLLNAANKSESVMSAEGGLRAFVQRLRERLSTGKILRPDVQDDVLRQPVSESKFRYPSPGSQQPPVVPQGPYEHVFNIEYHSRDARRRHTREQVHPSDAAATAGLPPTAGTPAQSRFLGMAGDFDRHQ 136          
BLAST of Ggra7782.t1 vs. uniprot
Match: A0A7J7IGP3 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 7 n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7IGP3_9RHOD)

HSP 1 Score: 101 bits (252), Expect = 7.600e-25
Identity = 58/121 (47.93%), Postives = 75/121 (61.98%), Query Frame = 0
Query:   25 GGLRGFVHRMQARVRTGKILRPDVEDDVLRKPVSESKFRYPSPGSQQPPVVPQGPYEHVFNIEYHSRDVRRR--HNTEQLDTAP---------AAATAGLPPTPGTPVQSHFLGMAGDFDR 134
            GGLRGF+ R+    R G+I R D+E +  R+P  ES+FRYPSPGSQ+P ++PQGP + VF+I YHSRD RRR    T  L  AP         A+ T+ LPPTPG  ++   LG   +F R
Sbjct:   33 GGLRGFLERL----RRGRIFRADLEPENWREPWRESRFRYPSPGSQKPALIPQGPQQRVFDITYHSRDERRRVIRETCLLRVAPSEPTPSSSEASNTSSLPPTPGVFLRWQNLGSLKEFTR 149          
BLAST of Ggra7782.t1 vs. uniprot
Match: A0A1X6NNY7 (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NNY7_PORUM)

HSP 1 Score: 96.3 bits (238), Expect = 7.490e-23
Identity = 55/121 (45.45%), Postives = 74/121 (61.16%), Query Frame = 0
Query:   26 GLRGFVHRMQARVRTGKILRPDVEDDVLRKPVSESKFRYPSPGSQQPPVVPQGPYEHVFNIEYHSRDVRRRHNTEQLDTAPAAAT-----------AGLPPTPG-TPVQSHFLGMAGDFDR 134
            GL G +  ++ R+ TGK+LRPDV DDVLR P+ +SK+R P+PG Q+P +VP GPY++VF+I Y  R       ++    A  AA+           A LPPTPG  PV  H LG AG+FD+
Sbjct:   19 GLIGVLASLKERLATGKLLRPDVADDVLRLPMEQSKYRTPAPGDQRPTIVPTGPYKNVFDIAYFKRGPGAGLASDASAPASPAASPLLSAEEAKSAADLPPTPGRVPVAIH-LGYAGEFDK 138          
BLAST of Ggra7782.t1 vs. uniprot
Match: M2Y413 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 7 n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2Y413_GALSU)

HSP 1 Score: 67.4 bits (163), Expect = 1.180e-11
Identity = 37/94 (39.36%), Postives = 53/94 (56.38%), Query Frame = 0
Query:   27 LRGFVHRMQARVRTGKILRPDVEDDVLRKPVSESKFRYPSPGSQQPPVVPQGPYEHVFNIEYHSRDVRRRHNTEQLDTAPA--AATAGLPPTPG 118
            ++  V  +  RVRTGKI RPD+ D V R    ++   +        P+VPQGPY+ VF+I+Y+SRD RR+   EQ++       +   LPP PG
Sbjct:   21 IKAIVQDIVYRVRTGKIFRPDLPDYVQRFSEVKNPRFHTHLQENAKPLVPQGPYKQVFDIQYYSRDTRRKIQREQVEPVKVFDPSAESLPPVPG 114          
The following BLAST results are available for this feature:
BLAST of Ggra7782.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A2V3IZH27.950e-7278.68Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A7J7IGP37.600e-2547.93NADH dehydrogenase [ubiquinone] 1 alpha subcomplex... [more]
A0A1X6NNY77.490e-2345.45Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
M2Y4131.180e-1139.36NADH dehydrogenase [ubiquinone] 1 alpha subcomplex... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 92..120

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000088_piloncontigtig00000088_pilon:533946..534427 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra7782.t1Ggra7782.t1Gracilaria gracilis GNS1m malemRNAtig00000088_pilon 533946..534427 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra7782.t1 ID=Ggra7782.t1|Name=Ggra7782.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=138bp
MALRSRAAPLLDAANKAETLLTAEGGLRGFVHRMQARVRTGKILRPDVED
DVLRKPVSESKFRYPSPGSQQPPVVPQGPYEHVFNIEYHSRDVRRRHNTE
QLDTAPAAATAGLPPTPGTPVQSHFLGMAGDFDRVQQ*
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