Ggra7781.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra7781.t1
Unique NameGgra7781.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length523
Homology
BLAST of Ggra7781.t1 vs. uniprot
Match: A0A2V3IZB8 (Myb-like protein D n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IZB8_9FLOR)

HSP 1 Score: 593 bits (1530), Expect = 3.370e-207
Identity = 342/494 (69.23%), Postives = 382/494 (77.33%), Query Frame = 0
Query:   29 PSRPSRVACDVVSVRSPPPLLTIPYSTHSTVVRAHHHRPLSPVSTTKPS-TLPQSPQSARHARVPLALTLQQHSTVTHASAIQHAPRRQPPMTDANYSRSPAPRNSSLADLVHRNQSAAPLHPQL--RPSAANSDDGSQQERNHQRPSRPVSNMQLLPPPGEVSRNAHIPPPAIDTSPKHMQRKRNISQLVSPM-LARDISSLTQKPDDHASSVAQPQLR----ISPLRVDDRRPDKFQRTNAPVEGSTDMLPAAGPLVNADSQSPSKSKRRALGKESRTELLEENRSLRIELELLKNKLRSAESRIKKMHKSMIRNESLLHKYRSKLVDVFESGGDARLSLRAVEEREHKRGDPSKLEGESVSNSQ-EEAWSAYSPSASFDPEQSVDIRRMHDHDVMSRSEGGVRKHRRTRAPAWTAREEEIFMKAYHKYGCQWKLYQDSLPGRSRRQIQSHGSYLIRQGKLAKKNSRPWQRRKPRHDGAPSSTVKDVEVETQ 513
            PS P+  +   VS  +  P  TIP++T STVV     RPLSPVSTTKPS T   S +SARH R  LA+ L  HS VTHASA+ H PRRQPPMTDANY RSP  R SSLADLVHRN++  PLHP L  RP A +SD+GSQQERNHQRP+ P S++ +LPPPGEVSR A   P A DTSPKH  RKR  + L+  M  A DISSLTQKPDDHASSVA PQ+R    ISP   DDRRPDKFQR N  VEGSTDMLP    L N + QSP KSKRR+ GKESRTELLEENR+LRIELE  K+KLRSAES I+KM + M + ESLL KYRS+LV++FESGGD RLSLR  +ER HKR + SK++GES+SNS+ EE WSAYSPS SF PEQS D RR  D DVMSRSEG   KHRRTRAPAWT REEEIFM+AYHK+GCQWKLYQ+SLPGRSRRQIQSHGSYLIRQGKLAKKNSRPWQRRK R +GAPSSTVKD +VETQ
Sbjct:   14 PSHPALPSFLSVSTPNASPS-TIPFTTDSTVVPPDDRRPLSPVSTTKPSHTAHFSSKSARHVRPQLAV-LNHHSIVTHASAMLHIPRRQPPMTDANYPRSPTHRTSSLADLVHRNENPTPLHPHLSSRPPAPDSDNGSQQERNHQRPAHPPSSLPVLPPPGEVSRTARNTPAAADTSPKHNPRKRRAAHLLPSMPAAPDISSLTQKPDDHASSVALPQVRDPFRISPPPTDDRRPDKFQRPNQHVEGSTDMLPTPSALNNVEHQSPPKSKRRSTGKESRTELLEENRTLRIELEQTKSKLRSAESHIRKMRRDMTKKESLLLKYRSQLVELFESGGDPRLSLRMRDERLHKREERSKVDGESMSNSEDEEQWSAYSPSGSFGPEQSEDFRRGPDRDVMSRSEGA-HKHRRTRAPAWTPREEEIFMEAYHKHGCQWKLYQNSLPGRSRRQIQSHGSYLIRQGKLAKKNSRPWQRRKARPEGAPSSTVKDADVETQ 504          
BLAST of Ggra7781.t1 vs. uniprot
Match: M1UPK2 (Uncharacterized protein n=2 Tax=cellular organisms TaxID=131567 RepID=M1UPK2_CYAM1)

HSP 1 Score: 72.8 bits (177), Expect = 5.220e-10
Identity = 31/70 (44.29%), Postives = 48/70 (68.57%), Query Frame = 0
Query:  426 KHRRTRAPAWTAREEEIFMKAYHKYGCQWKLYQDSLPGRSRRQIQSHGSYLIRQGKLAKKNSRPWQRRKP 495
            KH+  R   W+  E+ +F +AY  +GC+W   +  LP ++R+Q+QSHG+YLI++G + K NSR W RR+P
Sbjct:  390 KHKMRRHSVWSEEEDCMFRRAYATFGCKWNRIKSFLPNKTRQQVQSHGTYLIKRGVIRKFNSRSWTRRQP 459          
BLAST of Ggra7781.t1 vs. uniprot
Match: hypothetical protein n=1 Tax=Acytostelium subglobosum LB1 TaxID=1410327 RepID=UPI000644AF75 (hypothetical protein n=1 Tax=Acytostelium subglobosum LB1 TaxID=1410327 RepID=UPI000644AF75)

HSP 1 Score: 71.2 bits (173), Expect = 2.150e-9
Identity = 58/199 (29.15%), Postives = 86/199 (43.22%), Query Frame = 0
Query:  326 RIKKMHKSMIRNESLLHKYRSKLVDVFESGGDARLS---------------------------------LRAVEEREHKRGDPSKL-----EGESVSNSQEEAWSAYSPSASFDPEQSVDIRRMHDHDVMSRSEGGVRKHRRT---RAPAWTAREEEIFMKAYHKYGCQWKLYQDSLPGRSRRQIQSHGSYLIRQGKLA 483
            +++ M   + + + LL KYR  L+ +FE  G+A  S                                 +   E+R  K+  P  +      G+  + SQ +  S       F  E   +++R    D  S  EG   K R+T   R   W+  ++E F KAY+K+G  WK     LPG++R Q+QSHG YLIR GKLA
Sbjct:  293 KLEAMQNVIAKKDVLLTKYRKTLLKLFEDKGNAEESEGDNRSAISRSPSXXXXXXXXXXXXESRYSDSDMSDREQRPRKKSLPGAIMSMGMSGDQKAISQNQLLSQQQQQFIFRDESVNELKRKGGDDTKSGGEGAPIKKRKTGSRRNTLWSVEDDETFAKAYNKHGKSWKTIHSLLPGKTREQVQSHGQYLIRIGKLA 491          
BLAST of Ggra7781.t1 vs. uniprot
Match: D3AZX5 (Myb domain-containing protein n=1 Tax=Polysphondylium pallidum (strain ATCC 26659 / Pp 5 / PN500) TaxID=670386 RepID=D3AZX5_POLPP)

HSP 1 Score: 68.2 bits (165), Expect = 2.060e-8
Identity = 56/175 (32.00%), Postives = 76/175 (43.43%), Query Frame = 0
Query:  340 LLHKYRSKLVDVFE---SGGDA--------------------------RLSLRAVEEREHKRGDPSKLEGESVSNSQEEAWSAYSPSASFDPEQSVDIRRMHDHDVMSRSEGGVRKHRRT---RAPAWTAREEEIFMKAYHKYGCQWKLYQDSLPGRSRRQIQSHGSYLIRQGKL 482
            LL KYR  L+ +FE   SG D+                          R S     +REH+   P K EG +                 F  E   +++R ++      +  G  K RRT   +   W+A ++E F KAY+KYG  WK     LPG++R Q+QSHG YLIR GKL
Sbjct:  340 LLQKYRKTLLKLFEDKESGSDSESXXXXXXXXXXXXXXXXXXXXXXESRYSDTDGSDREHR---PKKKEGSNYQQXXXXXXXXXXXQYIFTHENVNELKRKNEDIKQQPTPDGGLKRRRTGSRKNTLWSAEDDETFAKAYNKYGKSWKTIHSLLPGKTREQVQSHGQYLIRIGKL 511          
BLAST of Ggra7781.t1 vs. uniprot
Match: M2Y6B4 (Myb domain-containing protein isoform 1 n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2Y6B4_GALSU)

HSP 1 Score: 67.0 bits (162), Expect = 3.360e-8
Identity = 30/54 (55.56%), Postives = 40/54 (74.07%), Query Frame = 0
Query:  431 RAPAWTAREEEIFMKAYHKYGCQWKLYQDSLPGRSRRQIQSHGSYLIRQGKLAK 484
            R+  WT  E+ +FMKA+ +YG +WK  Q  LP +SR+QIQSHG+YL+R GKL K
Sbjct:  348 RSNLWTPEEDALFMKAFKQYGTKWKQIQKVLPNKSRQQIQSHGAYLLRLGKLNK 401          
BLAST of Ggra7781.t1 vs. uniprot
Match: A0A151ZDC2 (Myb domain-containing protein n=1 Tax=Tieghemostelium lacteum TaxID=361077 RepID=A0A151ZDC2_9MYCE)

HSP 1 Score: 65.9 bits (159), Expect = 1.090e-7
Identity = 37/82 (45.12%), Postives = 48/82 (58.54%), Query Frame = 0
Query:  423 GVRKHRRTRAPAWTAREEEIFMKAYHKYGCQWKLYQDSLPGRSRRQIQSHGSYLIRQGKLAKKNSRPWQRRKPRHDGAPSST 504
            G RKH       WTA ++  F  AYHKYG  WK     LP ++R Q+QSHG YLIR GKL   + +  +R + + DG PSS+
Sbjct:  486 GSRKHN-----LWTAEDDAKFAAAYHKYGKSWKTIHSHLPDKTREQVQSHGQYLIRIGKLEDLH-KDGRRTRHQKDGNPSSS 561          
BLAST of Ggra7781.t1 vs. uniprot
Match: F0ZWN5 (Uncharacterized protein n=1 Tax=Dictyostelium purpureum TaxID=5786 RepID=F0ZWN5_DICPU)

HSP 1 Score: 65.1 bits (157), Expect = 1.930e-7
Identity = 39/100 (39.00%), Postives = 54/100 (54.00%), Query Frame = 0
Query:  402 PEQSVDIRRMHDHDVMSRSEGGVRKHRRTRAPAWTAREEEIFMKAYHKYGCQWKLYQDSLPGRSRRQIQSHGSYLIRQGKLAKKNSRPWQRRKPRHDGAP 501
            PE++   R+ +D+D        V   R T    WTA ++E F +AY+KYG  WK     LP ++R Q+QSHG YLIR GKL   +    + R  + DG P
Sbjct:  439 PEKNDLKRKSNDNDKQDVKRRKVGSRRNT---LWTAEDDEKFAEAYNKYGKSWKTIHSHLPDKTREQVQSHGQYLIRIGKLQDLHKDGRRTRHIKPDGLP 535          
BLAST of Ggra7781.t1 vs. uniprot
Match: hypothetical protein n=1 Tax=Acytostelium subglobosum LB1 TaxID=1410327 RepID=UPI000644B472 (hypothetical protein n=1 Tax=Acytostelium subglobosum LB1 TaxID=1410327 RepID=UPI000644B472)

HSP 1 Score: 64.7 bits (156), Expect = 2.510e-7
Identity = 27/48 (56.25%), Postives = 36/48 (75.00%), Query Frame = 0
Query:  435 WTAREEEIFMKAYHKYGCQWKLYQDSLPGRSRRQIQSHGSYLIRQGKL 482
            W+A ++EIF +AY+++G  WK     LPG+SR Q+QSHG YLIR GKL
Sbjct:  435 WSAEDDEIFARAYNRHGKSWKTIHSMLPGKSREQVQSHGQYLIRIGKL 482          
BLAST of Ggra7781.t1 vs. uniprot
Match: F4Q1K9 (Myb domain-containing protein n=1 Tax=Cavenderia fasciculata (strain SH3) TaxID=1054147 RepID=F4Q1K9_CAVFA)

HSP 1 Score: 64.3 bits (155), Expect = 3.470e-7
Identity = 34/82 (41.46%), Postives = 48/82 (58.54%), Query Frame = 0
Query:  404 QSVDIRRMHDHD---VMSRSEGGVRKHRRTRAPAWTAREEEIFMKAYHKYGCQWKLYQDSLPGRSRRQIQSHGSYLIRQGKL 482
            Q  D++R +  +   V  R   G RK+       W+A ++E F +AY+K+G  WK     LPG++R Q+QSHG YLIR GKL
Sbjct:  402 QDSDLKRKNTEEKDGVKRRRTSGSRKN-----TLWSAEDDETFARAYNKFGKSWKTIHSHLPGKTREQVQSHGQYLIRIGKL 478          
BLAST of Ggra7781.t1 vs. uniprot
Match: A0A8J4PV47 (Uncharacterized protein n=1 Tax=Polysphondylium violaceum TaxID=133409 RepID=A0A8J4PV47_9MYCE)

HSP 1 Score: 62.0 bits (149), Expect = 1.870e-6
Identity = 29/58 (50.00%), Postives = 37/58 (63.79%), Query Frame = 0
Query:  425 RKHRRTRAPAWTAREEEIFMKAYHKYGCQWKLYQDSLPGRSRRQIQSHGSYLIRQGKL 482
            RK    R   W+A ++E F +AY+KYG  WK     LP ++R Q+QSHG YLIR GKL
Sbjct:  527 RKRTSRRNTLWSAEDDEKFAEAYNKYGKSWKTIHSHLPDKTREQVQSHGQYLIRIGKL 584          
The following BLAST results are available for this feature:
BLAST of Ggra7781.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 12
Match NameE-valueIdentityDescription
A0A2V3IZB83.370e-20769.23Myb-like protein D n=1 Tax=Gracilariopsis chorda T... [more]
M1UPK25.220e-1044.29Uncharacterized protein n=2 Tax=cellular organisms... [more]
hypothetical protein n=1 Tax=Acytostelium subglobosum LB1 TaxID=1410327 RepID=UPI000644AF752.150e-929.15hypothetical protein n=1 Tax=Acytostelium subglobo... [more]
D3AZX52.060e-832.00Myb domain-containing protein n=1 Tax=Polysphondyl... [more]
M2Y6B43.360e-855.56Myb domain-containing protein isoform 1 n=1 Tax=Ga... [more]
A0A151ZDC21.090e-745.12Myb domain-containing protein n=1 Tax=Tieghemostel... [more]
F0ZWN51.930e-739.00Uncharacterized protein n=1 Tax=Dictyostelium purp... [more]
hypothetical protein n=1 Tax=Acytostelium subglobosum LB1 TaxID=1410327 RepID=UPI000644B4722.510e-756.25hypothetical protein n=1 Tax=Acytostelium subglobo... [more]
F4Q1K93.470e-741.46Myb domain-containing protein n=1 Tax=Cavenderia f... [more]
A0A8J4PV471.870e-650.00Uncharacterized protein n=1 Tax=Polysphondylium vi... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 299..333
NoneNo IPR availableGENE3D1.10.10.60coord: 435..498
e-value: 9.6E-8
score: 34.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 95..109
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 208..243
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 120..140
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 379..396
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 70..85
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 468..512
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 365..396
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 156..177
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 62..299
IPR001005SANT/Myb domainSMARTSM00717santcoord: 431..479
e-value: 5.4E-5
score: 32.6
IPR001005SANT/Myb domainPROSITEPS50090MYB_LIKEcoord: 427..477
score: 6.144367
IPR001005SANT/Myb domainCDDcd00167SANTcoord: 434..472
e-value: 1.60767E-6
score: 42.9478
IPR017930Myb domainPFAMPF00249Myb_DNA-bindingcoord: 434..472
e-value: 5.7E-7
score: 29.6
IPR017930Myb domainPROSITEPS51294HTH_MYBcoord: 427..481
score: 10.182661
IPR009057Homeobox-like domain superfamilySUPERFAMILY46689Homeodomain-likecoord: 431..472

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000088_piloncontigtig00000088_pilon:532223..533791 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra7781.t1Ggra7781.t1Gracilaria gracilis GNS1m malemRNAtig00000088_pilon 532223..533791 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra7781.t1 ID=Ggra7781.t1|Name=Ggra7781.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=523bp
MLARPRAAVCLPHSSSLRSSPRRTWPVSPSRPSRVACDVVSVRSPPPLLT
IPYSTHSTVVRAHHHRPLSPVSTTKPSTLPQSPQSARHARVPLALTLQQH
STVTHASAIQHAPRRQPPMTDANYSRSPAPRNSSLADLVHRNQSAAPLHP
QLRPSAANSDDGSQQERNHQRPSRPVSNMQLLPPPGEVSRNAHIPPPAID
TSPKHMQRKRNISQLVSPMLARDISSLTQKPDDHASSVAQPQLRISPLRV
DDRRPDKFQRTNAPVEGSTDMLPAAGPLVNADSQSPSKSKRRALGKESRT
ELLEENRSLRIELELLKNKLRSAESRIKKMHKSMIRNESLLHKYRSKLVD
VFESGGDARLSLRAVEEREHKRGDPSKLEGESVSNSQEEAWSAYSPSASF
DPEQSVDIRRMHDHDVMSRSEGGVRKHRRTRAPAWTAREEEIFMKAYHKY
GCQWKLYQDSLPGRSRRQIQSHGSYLIRQGKLAKKNSRPWQRRKPRHDGA
PSSTVKDVEVETQEVVQRFDEE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001005SANT/Myb
IPR017930Myb_dom
IPR009057Homeobox-like_sf