Ggra7774.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra7774.t1
Unique NameGgra7774.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length1101
Homology
BLAST of Ggra7774.t1 vs. uniprot
Match: A0A2V3IWP4 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IWP4_9FLOR)

HSP 1 Score: 1201 bits (3108), Expect = 0.000e+0
Identity = 639/1100 (58.09%), Postives = 822/1100 (74.73%), Query Frame = 0
Query:    1 MLSQRRSSEQASQSSHSTPSQLRLESALRHVNVLFSTTAFQENGARPESPTPSQPASRTSETSAVRRIFSREPRRCPVHSRLAVAANTKNPHLIRIYHLVDYGVNTRPIIHRSWNISDIRRIDGLGQPVAEGLLFALHFIPAKVFIFRTQSPKTRAIFLWSLLQTCVSKLKRAPPVQHLRLLDLQNMAEKHSLVDDSHPSIKPTASESSRAKSVDAAERQSDVPPTRTSEASTKKNSSR--TIQSKRTSLDESTNELSRQQRNFDHSPRLTDVQTQQGRLGSQAKRLQQFPRAFSEPKLSDS-GQKRSEHTLEDESSQEAPHSEHVQGRDSYVEQLAFEAAAKRFGRKRSSAVTNGSKEVMSNLDSDPKALWFENRRRPNEANTKIFMEHMRLRRQRKQAKLNDDEKANLLYSLQLFAADGDAHLHEFGNWLESHIQQLEVENIGDIVDVESCEPCHETADYGMSKDTVQREDLHDVLIKSITAADPWLRKCESLLEPYACLSQEINSDITLLETQRENNRALQEELDTLLHSISFTDQEQKLVDNLDVSFTAEENDLDYSSLHNVIHMLTSKYNEISKLTKLSGMSAVTDVLRLISEKRNRASRVLLPCLKSYLEDIYTERRRAILVFDETDLGSNTMVSRPSKDGEHVRSFRKGLQCIAACENNAYSQVTDHYVELSSSWTTNFLRFTMQGEPPLSLENGALDGRMERFAENLLYSCFVESHLAFSLFNNDQRDTEKILPAVLRRQLPSPELLHDFLKGHSQNQNEFKACLHQHFWRALEFFSSGLTSFSEQYLNEIVSRVEQRLGVLYNTYKKLFPVHVLKVGTMKPSNEATTGALDSFQTKCRVLCITSQRLVETHANAVIAILSESLDLRRDTQRSEFFSRVKKAVDLAGELSCSTHKDSRDLQTEANTCSRSICEKLVRAVLRRTEVASAAAGDYADDVRLQCYGYVSARLGGPASEDYLVLLTRLADRLREYVMSRWVNKKILRKMFHELFQDTASRTSESHVKLQTWVMGLNASVSASEIRMFVHSTLEGASKTCAIVPFYGDLISLIKDRMDGTLKRNRSNRHFLEIRPKLRSFMADLLFVLRNDLEALRE 1097
            MLSQRRSSEQASQS+HS+PSQLRLESALRHV++LFSTTAF+++ ARPESP PS+ A R SE SAVRRIFSREPRR P HSRLAVAAN KN HLIRIYHLVDYG NTRPII+ SWNISDIRRIDGLGQPV +G+ FALH IP KVF FRT SP+ RA FLWSLLQTCVS LKRAPPVQHLRLLDLQ MAE+ +      PS+K + ++SS ++S D  ER SDVPPTRTSEAST+++SSR  T QS+ TS   S     +Q   +D   + TD Q +QG L       Q FPRA+SEPKLSDS  QK SE   +++S  EAP+SE ++ +D +V+Q+AFE+AA R  +KR S +   +++ +S+  SD  AL FENRRR  +ANT+  ++ MR++RQRKQA+L+ +EK +L+YSL+LF  DG+ HLHEFG WLE+ IQ+LEVENIGDIVDVESCEP HET +   S+D  ++ +LHDVLIKSI  ADPWLRKCES+LEPYA L++E+N DITLLETQREN+RALQ+EL+TLL SISFT  EQ L+D+LDV+F    N++DYS LH VI++LTSK  EI+KL+KLS MSAVT+++R IS+K+NRAS  LLP LK +L+++Y  +RR +   +E    S+T +   S+  E ++ FRKGL+CIA CENN+ S + DHYVEL+SSWTT+ L+F MQGEPPLSL   ALD RMERFAENLLYSC +E  LAF L + +    EKILP++LRRQLPSPELL +FLK H ++   F+AC+HQHFW +L+FF       S + L   VS VE RL  L     + FPV  L+V  ++ ++EAT   L S++ KCR+L +TSQRLVETHAN ++A LSESLDL+R T+R+ FFSRVK+AVDL  ELS   +    D Q+ +N  ++SICE L+ A LRRTE+ASA AG+ ADDV+LQCYGY++A+L   A  DYL  L  L++R+RE+VM RW  + +L KMFH +  +T S+ +E + K++  V  L+AS +  E+R  VH+TLE A+KTC I+PFY D++SLIK+R++  L++ R+N++  +IRP +RSF ++LL   R +LE +R+
Sbjct:    1 MLSQRRSSEQASQSTHSSPSQLRLESALRHVSILFSTTAFEDHDARPESPIPSRTAPRNSEASAVRRIFSREPRRRPAHSRLAVAANLKNSHLIRIYHLVDYGANTRPIIYHSWNISDIRRIDGLGQPVPDGVSFALHVIPNKVFTFRTNSPQARATFLWSLLQTCVSTLKRAPPVQHLRLLDLQTMAEQRAEGSHDRPSVKGSLADSSPSRSADGTERHSDVPPTRTSEASTRRHSSRSRTTQSRNTSAGGSRGGSVKQDHFYDGRSQNTDSQAKQGALAHMPSHAQGFPRAYSEPKLSDSHSQKDSEGFPDEQSLHEAPNSERIRAKDPHVDQVAFESAAYRLQQKRVSGLPTDARDFLSSNGSDANALLFENRRRTGDANTRTLIDRMRIQRQRKQARLSHEEKTDLMYSLKLFEEDGEVHLHEFGKWLENRIQRLEVENIGDIVDVESCEPGHETEEKETSQDETEKGNLHDVLIKSIVDADPWLRKCESILEPYASLAEEVNHDITLLETQRENSRALQQELETLLQSISFTGMEQGLIDDLDVTFAIHRNNVDYSKLHEVINLLTSKSREIAKLSKLSNMSAVTNIVRFISDKQNRASTFLLPALKEFLDNLYIAKRRTLFGTEEGSPSSDTDIRGWSE--ESLKDFRKGLRCIAVCENNSLSYIVDHYVELASSWTTDLLQFLMQGEPPLSLTKDALDVRMERFAENLLYSCLLEGDLAFRLLDRELHGREKILPSLLRRQLPSPELLREFLKRHDRDDKGFEACIHQHFWHSLDFFGKKYEDCSGEDLRSTVSNVEVRLRTLCEVLGRGFPVAELQVRNLQNTDEATKATLASYRVKCRILSLTSQRLVETHANDMVASLSESLDLKRATKRAVFFSRVKEAVDLCIELSSPLYVGVGDPQSASNEKTKSICEMLIGAALRRTEIASAGAGEQADDVKLQCYGYIAAKLREAADVDYLARLAHLSNRVREHVMCRWTQRIVLSKMFHGITIETTSQDAEVYSKVKMAVASLDASTTIMEVRKAVHATLEEAAKTCVILPFYTDMMSLIKERVEDMLRKARNNKYVSDIRPTMRSFTSELLSSFRKELEIMRK 1098          
BLAST of Ggra7774.t1 vs. uniprot
Match: R7QDW7 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QDW7_CHOCR)

HSP 1 Score: 248 bits (633), Expect = 7.740e-66
Identity = 208/787 (26.43%), Postives = 364/787 (46.25%), Query Frame = 0
Query:  378 EANTKIFMEHMRLRRQRKQAKLNDDEKANLLYSLQLFAADGDAH-LHEFGNWLESHIQQLEVENIGDIVDVESCEPCHETADYGMSKDTVQREDL---------HDVLIKSITAADPWLRKCESLLEPYACLSQEINSDITLLETQRENNRALQEELDTLLHSISFTDQEQKLVDNL---DVSFTAEENDLDYSSLHNVIHMLTSKYNEISKLTKLSGMSAVTDVLRLISEKRNRASRVLLPCLKSYLEDIYTERRRAILVFDETDLGSNTMVS----RPSKDGEHVRSFRKGLQCIAACENNAYSQVTDHYVELSSSWTTNFLRFTMQGEPPLSLENGALDGRMERFAENLLYSCFVESHLAFSLFNN--DQRDTEKI--LPAVLRRQLPSPELLHDFLKGHSQNQNEFKACLHQHFWRALEFFSSGL------------------------------TSFSEQYL-------NEIVSRVEQRLGVLYNTYKKLFPVHVLKVGTMKPS---NEATTGALDSFQTKCRVLCITSQRLVETHANAVIAILSESLDLRRDTQRSEFFSRVKKAVDLAGELSCSTHK--DSRDLQTEANTCSRSICEKLVRAVLRRTEVASAAAGD-YADDVRLQCYGYVSARLGGPASEDYLVLLTRLADRLREYVMSRWVNKKILRKMFHELFQDTASRTSESHVKLQTWVMGLNASVSASEIRMFVHSTLEGASKTCAIVPFYGDLISLIKDRMDGTLKRNRSNRHFLEIRPKLRSFMADLLFVLRNDLEALRETYK 1100
            EA+T   +    L +++K  KL+  E+ +L   L++F A+ + + L +   W E+ I QLE +NI D+V VE         D   +K     E L         +D L+ ++  A PWL KC+ +L PYA L ++I+  +TLLE QR N   L   L  L+ ++SF + EQ LVD +   D S    E   D         ++ +K   + +L+ L+ M AV  V  L+S+++  AS +L+P LK +++ IY   R  I        GS  M+     R S   E  + F KG+Q +A      + ++ +H++ LSS+ T   L   M+      ++ G +    + F+ +L Y+  VE   A  LF +       E+I  LP +LRR + +  ++  FL    +  +  +AC++    R L+    G+                              T+   +Y        NE V R +Q    L    K        ++   + +    E  T  + ++    + +    + L     ++ I+ LS S+D+  D  R+EFF  V++++DL   L+ S +       ++T     +RS+CE+LV A +R TE+++ +  +  +  V+LQCYGY++  L      +YL+    L+ R+  +VM++W  +++   +F  L  ++   + E+  K Q+ +  L+ S  AS+++  + + LE ASK+  +       I+L K++++  L R +  R   E R  L +   +LL  LR +L  L E  K
Sbjct:    3 EASTAKVVVERNLLQEKKLFKLSSQEQNHLTSVLKVFRAENNCYSLSDLSCWAEARIGQLENKNIADVVSVEEQSMSTWHRDLKSTKAAENEESLEETNGDQWSYDSLVSAMKHAQPWLGKCKLILAPYASLVKDIHDGVTLLEVQRSNTSRLSHLLTELIETLSFKESEQSLVDGIGTCDASLNLAE--FDGEDFQAATRVIATKVAALRRLSPLADMEAVGRVQGLLSQRQQEASTILMPMLKEHIDQIYDRERNLIAK------GSFEMIRKCRFRDSMSTER-QEFLKGVQSLAIFGKGKFVELLEHFISLSSALTMRILHAGMERMQGRLVDGGTIVRETKIFSNHLFYAAVVEGIQACQLFADVLGAASEEEIISLPGLLRRLISTDAIIDVFLT--EERNDAMRACIYLTVSRYLQLIVRGVKDGDWIRNADILVKTMEASATDGDIDFENDTAIQRKYSTSLQLTENEKVRRDDQDSQPLSRVSKSASFSGSSRLDRSENAFTCTEHVTACMSNYLDIAQNMSNRCKSLAAEQVSSYISALSNSMDMNSDHARAEFFFHVQESMDLCDILTASEYDLFKGPPVKTAEIDPARSLCERLVAAAMRSTEISTHSCIERVSGTVKLQCYGYIATTLDRAEIPEYLIPFAHLSARVWRHVMAKWAEREVFGSLFSSLKMESTKPSGEAQRKFQSVISELDVSQMASQMKNSLLAVLETASKSFVLEASCAAFIALTKEKLEDCLYRAKKQRLSAESRSLLVTVSKELLASLRTELGRLSENRK 778          
BLAST of Ggra7774.t1 vs. uniprot
Match: A0A5J4YLC1 (Uncharacterized protein n=2 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YLC1_PORPP)

HSP 1 Score: 88.6 bits (218), Expect = 6.110e-14
Identity = 46/109 (42.20%), Postives = 66/109 (60.55%), Query Frame = 0
Query:   82 LAVAANTKNPHLIRIYHLVDYGVNTRPI-IHRSWNISDIRRIDGLGQPVAEGLLFALHFIPAKVFIFRTQSPKTRAIFLWSLLQTCVSKLKRAPPVQHLRLLDLQNMAE 189
            LAV    +    +R++ + D    T  + I R+W ++D+ ++DGL  P    L FAL F   K  ++   SP+ RAIFLW LLQTC S+L RAPPV+ LR+L+LQ  A+
Sbjct:  178 LAVCETERGSPQLRLHLMQDAPFATGKLAISRTWLLNDLSKVDGLNAPADVALEFALLFSDTKRLVWVCDSPRDRAIFLWGLLQTCASRLSRAPPVEGLRILELQEFAQ 286          
BLAST of Ggra7774.t1 vs. uniprot
Match: A0A7S1XEF6 (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1XEF6_9RHOD)

HSP 1 Score: 85.9 bits (211), Expect = 3.540e-13
Identity = 43/111 (38.74%), Postives = 69/111 (62.16%), Query Frame = 0
Query:   82 LAVAANTKNPHLIRIYHLVDYGVNTRPIIHRSWNISDIRRIDGLGQPVAEGLLFALHFIPAKVFIFRTQSPKTRAIFLWSLLQTCVSKLKRAPPVQHLRLLDLQNMAEKHS 192
            LA+    K+   +R++ + D+G     I+ R+W ++++ ++DG+G  V   L FAL F  +K F F   + + RA FLW +LQ C ++L RAPPV+ LR+L+LQ +AE  S
Sbjct:  206 LALCEGKKSSSQLRLHKIADHGGGKLSIM-RTWWLTELTKVDGMGGAVETALAFALVFGESKKFTFAAPTARDRAEFLWEILQYCAARLGRAPPVEGLRILELQTLAESVS 315          
BLAST of Ggra7774.t1 vs. uniprot
Match: A0A7S0ZBG5 (Hypothetical protein n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZBG5_9RHOD)

HSP 1 Score: 74.3 bits (181), Expect = 1.290e-9
Identity = 42/112 (37.50%), Postives = 66/112 (58.93%), Query Frame = 0
Query:   82 LAVAANTKNPHLIRIYHLVDYGVNT-RPIIHRSWNISDIRRIDGLGQPVAEGLLFALHFIPAKVFIFRTQSPKTRAIFLWSLLQTCVSKLKRAPPVQHLRLLDLQNMAEKHS 192
            LAV    +  + +R + LV+    + R    RS  +SD+ ++DG G P      FA+ F   K  ++ +++P  RA FLW++L+T  SKL +APPV+ LRLL+LQ +A+  S
Sbjct:  121 LAVCEGDRISNNLRFHKLVENSPGSLRFQSRRSVPLSDVSKLDGFGLPAGSSAEFAVFFSDGKRDVWFSRNPIERATFLWAVLKTSASKLGKAPPVEGLRLLELQTLADTSS 232          
The following BLAST results are available for this feature:
BLAST of Ggra7774.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A2V3IWP40.000e+058.09Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QDW77.740e-6626.43Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A5J4YLC16.110e-1442.20Uncharacterized protein n=2 Tax=Porphyridium purpu... [more]
A0A7S1XEF63.540e-1338.74Hypothetical protein n=1 Tax=Compsopogon caeruleus... [more]
A0A7S0ZBG51.290e-937.50Hypothetical protein n=1 Tax=Timspurckia oligopyre... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 510..530
NoneNo IPR availableCOILSCoilCoilcoord: 241..261
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 265..282
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 193..329
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 39..64
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 297..326
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 39..66
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..25
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 222..255

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000088_piloncontigtig00000088_pilon:508102..511404 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra7774.t1Ggra7774.t1Gracilaria gracilis GNS1m malemRNAtig00000088_pilon 508102..511404 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra7774.t1 ID=Ggra7774.t1|Name=Ggra7774.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=1101bp
MLSQRRSSEQASQSSHSTPSQLRLESALRHVNVLFSTTAFQENGARPESP
TPSQPASRTSETSAVRRIFSREPRRCPVHSRLAVAANTKNPHLIRIYHLV
DYGVNTRPIIHRSWNISDIRRIDGLGQPVAEGLLFALHFIPAKVFIFRTQ
SPKTRAIFLWSLLQTCVSKLKRAPPVQHLRLLDLQNMAEKHSLVDDSHPS
IKPTASESSRAKSVDAAERQSDVPPTRTSEASTKKNSSRTIQSKRTSLDE
STNELSRQQRNFDHSPRLTDVQTQQGRLGSQAKRLQQFPRAFSEPKLSDS
GQKRSEHTLEDESSQEAPHSEHVQGRDSYVEQLAFEAAAKRFGRKRSSAV
TNGSKEVMSNLDSDPKALWFENRRRPNEANTKIFMEHMRLRRQRKQAKLN
DDEKANLLYSLQLFAADGDAHLHEFGNWLESHIQQLEVENIGDIVDVESC
EPCHETADYGMSKDTVQREDLHDVLIKSITAADPWLRKCESLLEPYACLS
QEINSDITLLETQRENNRALQEELDTLLHSISFTDQEQKLVDNLDVSFTA
EENDLDYSSLHNVIHMLTSKYNEISKLTKLSGMSAVTDVLRLISEKRNRA
SRVLLPCLKSYLEDIYTERRRAILVFDETDLGSNTMVSRPSKDGEHVRSF
RKGLQCIAACENNAYSQVTDHYVELSSSWTTNFLRFTMQGEPPLSLENGA
LDGRMERFAENLLYSCFVESHLAFSLFNNDQRDTEKILPAVLRRQLPSPE
LLHDFLKGHSQNQNEFKACLHQHFWRALEFFSSGLTSFSEQYLNEIVSRV
EQRLGVLYNTYKKLFPVHVLKVGTMKPSNEATTGALDSFQTKCRVLCITS
QRLVETHANAVIAILSESLDLRRDTQRSEFFSRVKKAVDLAGELSCSTHK
DSRDLQTEANTCSRSICEKLVRAVLRRTEVASAAAGDYADDVRLQCYGYV
SARLGGPASEDYLVLLTRLADRLREYVMSRWVNKKILRKMFHELFQDTAS
RTSESHVKLQTWVMGLNASVSASEIRMFVHSTLEGASKTCAIVPFYGDLI
SLIKDRMDGTLKRNRSNRHFLEIRPKLRSFMADLLFVLRNDLEALRETYK
*
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