Ggra7771.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Ggra7771.t1
Unique Name	Ggra7771.t1
Type	polypeptide
Organism	Gracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length	153

Homology

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BLAST of Ggra7771.t1 vs. uniprot
Match: A0A2V3IWP0 (Nucleoside diphosphate kinase n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IWP0_9FLOR)

HSP 1 Score: 275 bits (702), Expect = 5.620e-93
Identity = 132/152 (86.84%), Postives = 142/152 (93.42%), Query Frame = 0

Query:    1 MDRTERTFIAVKPDGMNRGILGGIISRFENKGYKLVGIKTLVPTKQLAMEHYAALSAKPFFKDLVEFITSGPVCAMVWEGEQVVATARQMIGETNPLSSAPGTIRGDYAVDVGRNVIHGSDAVETAQREIALWFEKSELASWQPTSSAWIYE 152
            M RTERTFIAVKPDGMNRGILG IISRFE KGYKLVGIKTLVP+KQLA EHY+AL  KPFFKDLV+FITSGPVCAMVWEGEQVV TAR+MIGETNPLSSAPGTIRGD+AVDVGRNVIHGSDAVETAQREI+LWFE+ EL +W+PTS+ WIYE
Sbjct:    1 MARTERTFIAVKPDGMNRGILGNIISRFEAKGYKLVGIKTLVPSKQLAEEHYSALKEKPFFKDLVDFITSGPVCAMVWEGEQVVVTARKMIGETNPLSSAPGTIRGDFAVDVGRNVIHGSDAVETAQREISLWFEQGELTAWEPTSAVWIYE 152

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BLAST of Ggra7771.t1 vs. uniprot
Match: R7QBR9 (Nucleoside-diphosphate kinase n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QBR9_CHOCR)

HSP 1 Score: 238 bits (608), Expect = 1.080e-78
Identity = 116/152 (76.32%), Postives = 130/152 (85.53%), Query Frame = 0

Query:    1 MDRTERTFIAVKPDGMNRGILGGIISRFENKGYKLVGIKTLVPTKQLAMEHYAALSAKPFFKDLVEFITSGPVCAMVWEGEQVVATARQMIGETNPLSSAPGTIRGDYAVDVGRNVIHGSDAVETAQREIALWFEKSELASWQPTSSAWIYE 152
            M + ERTFIA+KPDGMNRG+LG IISRFE KGYKLVGIKTLVP++QLA  HYA+LS+KPFF  LV+FITSGPVCAMVWEG  VV TAR+MIGETNPLSS PGTIRGD+ VDVGRN   GSDAV+TA REI +WFE SEL +W PT+S WIYE
Sbjct:    1 MSQDERTFIALKPDGMNRGLLGNIISRFEAKGYKLVGIKTLVPSRQLAETHYASLSSKPFFAGLVDFITSGPVCAMVWEGAGVVTTARKMIGETNPLSSNPGTIRGDFGVDVGRN---GSDAVDTATREIGIWFEPSELCTWSPTASVWIYE 149

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BLAST of Ggra7771.t1 vs. uniprot
Match: A0A5J4YUP0 (Nucleoside diphosphate kinase n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YUP0_PORPP)

HSP 1 Score: 226 bits (577), Expect = 6.540e-74
Identity = 105/148 (70.95%), Postives = 120/148 (81.08%), Query Frame = 0

Query:    5 ERTFIAVKPDGMNRGILGGIISRFENKGYKLVGIKTLVPTKQLAMEHYAALSAKPFFKDLVEFITSGPVCAMVWEGEQVVATARQMIGETNPLSSAPGTIRGDYAVDVGRNVIHGSDAVETAQREIALWFEKSELASWQPTSSAWIYE 152
            ERTFIA+KPDG+NR ++G IISRFE +GYKLV +K L P+K+LA  HYAALS+KPFF  LVEFI SGPVCAMVWEG  VV T R MIG T P  SAPGTIRGDY +DVGRNVIHGSDAV+TA+REI +WF+  EL  W+PT S WIYE
Sbjct:    6 ERTFIAIKPDGVNRALIGDIISRFEKRGYKLVAMKLLKPSKELAETHYAALSSKPFFAGLVEFICSGPVCAMVWEGTDVVKTGRTMIGATKPTESAPGTIRGDYGIDVGRNVIHGSDAVDTAEREIGIWFKPEELVEWEPTMSTWIYE 153

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BLAST of Ggra7771.t1 vs. uniprot
Match: A0A7C3ZIH8 (Nucleoside diphosphate kinase n=2 Tax=Oscillatoriales TaxID=1150 RepID=A0A7C3ZIH8_9CYAN)

HSP 1 Score: 219 bits (558), Expect = 4.960e-71
Identity = 104/152 (68.42%), Postives = 124/152 (81.58%), Query Frame = 0

Query:    1 MDRTERTFIAVKPDGMNRGILGGIISRFENKGYKLVGIKTLVPTKQLAMEHYAALSAKPFFKDLVEFITSGPVCAMVWEGEQVVATARQMIGETNPLSSAPGTIRGDYAVDVGRNVIHGSDAVETAQREIALWFEKSELASWQPTSSAWIYE 152
            M+R ERTFIA+KPDG+ RG++G I+SRFE KGY LVG+K L  +++LA  HYA    KPFF  LV+FITSGPV AMVWEG+ VVA AR++IG TNPL+S PGTIRGD+ VDVGRN+IHGSDAV TA+REI LWF  +ELASWQPT + WIYE
Sbjct:    1 MEREERTFIAIKPDGVQRGLVGQIVSRFEAKGYTLVGMKLLQVSRELAEAHYAEHKEKPFFPGLVQFITSGPVVAMVWEGKGVVAAARKLIGATNPLNSEPGTIRGDFGVDVGRNIIHGSDAVATAEREIKLWFTDAELASWQPTVTPWIYE 152

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BLAST of Ggra7771.t1 vs. uniprot
Match: A0A1S4NYF9 (Nucleoside diphosphate kinase n=3 Tax=Naegleria TaxID=5761 RepID=A0A1S4NYF9_NAEFO)

HSP 1 Score: 219 bits (557), Expect = 6.810e-71
Identity = 102/148 (68.92%), Postives = 120/148 (81.08%), Query Frame = 0

Query:    5 ERTFIAVKPDGMNRGILGGIISRFENKGYKLVGIKTLVPTKQLAMEHYAALSAKPFFKDLVEFITSGPVCAMVWEGEQVVATARQMIGETNPLSSAPGTIRGDYAVDVGRNVIHGSDAVETAQREIALWFEKSELASWQPTSSAWIYE 152
            ERTFIA+KPD + RG++G II+RFE KG+KLV +K + P+  LA +HYA    KPFF  LVEF+TSGPV AMVWEG+ VVA AR+MIG T PL SAPGTIRGD+A+DVGRN+IHGSDAVETAQREIALWF+ SEL  W PT + WIYE
Sbjct:    4 ERTFIALKPDAVQRGLVGTIIARFEQKGFKLVALKLITPSADLAKKHYAEHDGKPFFNGLVEFLTSGPVAAMVWEGKGVVAAARKMIGATKPLESAPGTIRGDFAIDVGRNIIHGSDAVETAQREIALWFQDSELNEWTPTQNKWIYE 151

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BLAST of Ggra7771.t1 vs. uniprot
Match: A0A7S1TKR2 (Nucleoside diphosphate kinase n=1 Tax=Erythrolobus australicus TaxID=1077150 RepID=A0A7S1TKR2_9RHOD)

HSP 1 Score: 221 bits (562), Expect = 9.050e-71
Identity = 101/148 (68.24%), Postives = 121/148 (81.76%), Query Frame = 0

Query:    5 ERTFIAVKPDGMNRGILGGIISRFENKGYKLVGIKTLVPTKQLAMEHYAALSAKPFFKDLVEFITSGPVCAMVWEGEQVVATARQMIGETNPLSSAPGTIRGDYAVDVGRNVIHGSDAVETAQREIALWFEKSELASWQPTSSAWIYE 152
            ERTFIA+KPDG+NRG++G II+RFE KGY+LV +K L P+K LA  HY ALS+KPFF DLV+FI SGPV AMVW+G  VV T R+MIG T P  SAPGTIRGD+ ++VGRNVIHGSDAV+TAQREI +WFE  EL SW+PT + W+YE
Sbjct:   66 ERTFIAIKPDGVNRGLVGQIIARFEQKGYQLVALKMLTPSKSLAQTHYEALSSKPFFNDLVDFICSGPVVAMVWQGTDVVLTGRRMIGATKPSESAPGTIRGDFGLEVGRNVIHGSDAVDTAQREIGIWFEPQELNSWEPTINCWVYE 213

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BLAST of Ggra7771.t1 vs. uniprot
Match: NDK (Nucleoside diphosphate kinase n=1 Tax=Cyanothece sp. (strain PCC 7425 / ATCC 29141) TaxID=395961 RepID=NDK_CYAP4)

HSP 1 Score: 216 bits (551), Expect = 5.230e-70
Identity = 101/148 (68.24%), Postives = 123/148 (83.11%), Query Frame = 0

Query:    5 ERTFIAVKPDGMNRGILGGIISRFENKGYKLVGIKTLVPTKQLAMEHYAALSAKPFFKDLVEFITSGPVCAMVWEGEQVVATARQMIGETNPLSSAPGTIRGDYAVDVGRNVIHGSDAVETAQREIALWFEKSELASWQPTSSAWIYE 152
            ERTF+AVKPDG+ R ++G II RFE KG+KLVG+K +  +K LA +HY     KPFF  LV+FITSGPV AMVWEG+ VVA+AR++IG TNPL+S PGTIRGDY VD+GRN+IHGSDAVETAQREIALWF+ +EL SW+PT ++WIYE
Sbjct:    2 ERTFLAVKPDGVQRALVGEIIRRFEAKGFKLVGLKLMNVSKDLAEQHYGEHKEKPFFPGLVQFITSGPVVAMVWEGKGVVASARKIIGATNPLNSEPGTIRGDYGVDIGRNIIHGSDAVETAQREIALWFQPAELVSWEPTLTSWIYE 149

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BLAST of Ggra7771.t1 vs. uniprot
Match: NDK (Nucleoside diphosphate kinase n=6 Tax=Cyanobacteria TaxID=1117 RepID=NDK_ACAM1)

HSP 1 Score: 215 bits (547), Expect = 2.120e-69
Identity = 98/148 (66.22%), Postives = 122/148 (82.43%), Query Frame = 0

Query:    5 ERTFIAVKPDGMNRGILGGIISRFENKGYKLVGIKTLVPTKQLAMEHYAALSAKPFFKDLVEFITSGPVCAMVWEGEQVVATARQMIGETNPLSSAPGTIRGDYAVDVGRNVIHGSDAVETAQREIALWFEKSELASWQPTSSAWIYE 152
            ERTF+AVKPDG+ RG++G IISR+E KG+ LVG+K +V +++LA +HY     KPFF  LV+FITSGPV AMVWEG+ VVA AR++IG TNPL S PGTIRGD+ +D+GRN+IHGSDAVETAQREI+LWF+  ELA W PT ++WIYE
Sbjct:    2 ERTFLAVKPDGVQRGLVGEIISRYEAKGFTLVGLKLMVVSRELAEQHYGEHKEKPFFSGLVDFITSGPVVAMVWEGKGVVAAARKIIGATNPLGSEPGTIRGDFGIDIGRNIIHGSDAVETAQREISLWFKSEELADWSPTLTSWIYE 149

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BLAST of Ggra7771.t1 vs. uniprot
Match: A0A1J1LIA2 (Nucleoside diphosphate kinase n=6 Tax=Planktothrix TaxID=54304 RepID=A0A1J1LIA2_9CYAN)

HSP 1 Score: 215 bits (547), Expect = 2.680e-69
Identity = 94/148 (63.51%), Postives = 124/148 (83.78%), Query Frame = 0

Query:    5 ERTFIAVKPDGMNRGILGGIISRFENKGYKLVGIKTLVPTKQLAMEHYAALSAKPFFKDLVEFITSGPVCAMVWEGEQVVATARQMIGETNPLSSAPGTIRGDYAVDVGRNVIHGSDAVETAQREIALWFEKSELASWQPTSSAWIYE 152
            ERTF+A+KPDG+ RG++G II RFE KG+ LVG+K L+P+++LA +HYA    +PFFKDLV FITSGP+ AMVWEG+ VVA+AR+MIG TNPL++ PGTIRGD+ +++GRN+IHGSDA+ETAQ EI+LWF  +ELA+W+PT   W+ E
Sbjct:    9 ERTFLAIKPDGVQRGLVGEIIRRFETKGFTLVGLKLLIPSQELAEKHYAVHKERPFFKDLVSFITSGPIVAMVWEGDGVVASARKMIGATNPLNAEPGTIRGDFGINIGRNIIHGSDAIETAQNEISLWFSDAELANWEPTIKPWLVE 156

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BLAST of Ggra7771.t1 vs. uniprot
Match: A0A1C0VFB6 (Nucleoside diphosphate kinase n=3 Tax=Limnothrix TaxID=132605 RepID=A0A1C0VFB6_9CYAN)

HSP 1 Score: 214 bits (544), Expect = 6.080e-69
Identity = 100/148 (67.57%), Postives = 123/148 (83.11%), Query Frame = 0

Query:    5 ERTFIAVKPDGMNRGILGGIISRFENKGYKLVGIKTLVPTKQLAMEHYAALSAKPFFKDLVEFITSGPVCAMVWEGEQVVATARQMIGETNPLSSAPGTIRGDYAVDVGRNVIHGSDAVETAQREIALWFEKSELASWQPTSSAWIYE 152
            ERTFIA+KPDG+ RG++G II RFE KG+ LVG+K L  +++LA EHY+    +PFF  LVEFITSGPV AMVWEG+ VVA+ARQ+IG TNPL++ PGTIRGD+ V++GRN+IHGSDAVETAQREIALWF+  ELA+W PT S W+YE
Sbjct:    2 ERTFIAIKPDGVQRGLIGEIIKRFEVKGFTLVGLKLLNVSRELAEEHYSVHRERPFFAGLVEFITSGPVVAMVWEGDGVVASARQIIGATNPLTANPGTIRGDFGVNIGRNLIHGSDAVETAQREIALWFKDEELANWSPTISKWLYE 149

The following BLAST results are available for this feature:

BLAST of Ggra7771.t1 vs. uniprot

BLAST of Ggra7771.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A2V3IWP0	5.620e-93	86.84	Nucleoside diphosphate kinase n=1 Tax=Gracilariops...	[more]
R7QBR9	1.080e-78	76.32	Nucleoside-diphosphate kinase n=1 Tax=Chondrus cri...	[more]
A0A5J4YUP0	6.540e-74	70.95	Nucleoside diphosphate kinase n=1 Tax=Porphyridium...	[more]
A0A7C3ZIH8	4.960e-71	68.42	Nucleoside diphosphate kinase n=2 Tax=Oscillatoria...	[more]
A0A1S4NYF9	6.810e-71	68.92	Nucleoside diphosphate kinase n=3 Tax=Naegleria Ta...	[more]
A0A7S1TKR2	9.050e-71	68.24	Nucleoside diphosphate kinase n=1 Tax=Erythrolobus...	[more]
NDK	5.230e-70	68.24	Nucleoside diphosphate kinase n=1 Tax=Cyanothece s...	[more]
NDK	2.120e-69	66.22	Nucleoside diphosphate kinase n=6 Tax=Cyanobacteri...	[more]
A0A1J1LIA2	2.680e-69	63.51	Nucleoside diphosphate kinase n=6 Tax=Planktothrix...	[more]
A0A1C0VFB6	6.080e-69	67.57	Nucleoside diphosphate kinase n=3 Tax=Limnothrix T...	[more]

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InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001564	Nucleoside diphosphate kinase	PRINTS	PR01243	NUCDPKINASE	coord: 71..88 score: 61.56 coord: 92..108 score: 67.36 coord: 7..29 score: 60.03 coord: 51..70 score: 54.19 coord: 115..134 score: 68.71
IPR001564	Nucleoside diphosphate kinase	HAMAP	MF_00451	NDP_kinase	coord: 4..139 score: 33.356174
IPR034907	Nucleoside diphosphate kinase-like domain	SMART	SM00562	ndk_5	coord: 4..141 e-value: 2.5E-82 score: 289.5
IPR034907	Nucleoside diphosphate kinase-like domain	PFAM	PF00334	NDK	coord: 5..138 e-value: 6.6E-54 score: 181.5
IPR036850	Nucleoside diphosphate kinase-like domain superfamily	GENE3D	3.30.70.141		coord: 1..152 e-value: 3.2E-62 score: 210.9
IPR036850	Nucleoside diphosphate kinase-like domain superfamily	SUPERFAMILY	54919	Nucleoside diphosphate kinase, NDK	coord: 4..152
None	No IPR available	PANTHER	PTHR11349:SF44	NUCLEOSIDE DIPHOSPHATE KINASE II, CHLOROPLASTIC	coord: 2..151
None	No IPR available	PANTHER	PTHR11349	NUCLEOSIDE DIPHOSPHATE KINASE	coord: 2..151
None	No IPR available	CDD	cd04413	NDPk_I	coord: 5..134 e-value: 2.86104E-85 score: 243.915
IPR023005	Nucleoside diphosphate kinase, active site	PROSITE	PS00469	NDP_KINASES	coord: 115..123

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
tig00000088_pilon	contig	tig00000088_pilon:426895..427547 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria gracilis GNS1m male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Ggra7771.t1	Ggra7771.t1	Gracilaria gracilis GNS1m male	mRNA	tig00000088_pilon 426895..427547 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Ggra7771.t1 ID=Ggra7771.t1|Name=Ggra7771.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=153bp
MDRTERTFIAVKPDGMNRGILGGIISRFENKGYKLVGIKTLVPTKQLAME
HYAALSAKPFFKDLVEFITSGPVCAMVWEGEQVVATARQMIGETNPLSSA
PGTIRGDYAVDVGRNVIHGSDAVETAQREIALWFEKSELASWQPTSSAWI
YE*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR001564	Nucleoside_diP_kinase
IPR034907	NDK-like_dom
IPR036850	NDK-like_dom_sf
IPR023005	Nucleoside_diP_kinase_AS