Ggra7768.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra7768.t1
Unique NameGgra7768.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length496
Homology
BLAST of Ggra7768.t1 vs. uniprot
Match: A0A2V3IWX5 (RNA polymerase sigma factor SigA n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IWX5_9FLOR)

HSP 1 Score: 581 bits (1498), Expect = 2.130e-201
Identity = 317/453 (69.98%), Postives = 360/453 (79.47%), Query Frame = 0
Query:   49 RAAVHVPISPPLPXXXXXXXXPAVAFSETEPLPADPQRGFLKRNGDECNLQVLEAAREGDLVREDYLATSKEVPVIRPKQTRTSRRKKGAASRKRSAVDDQLA----SGYTATTAGAVRATNNAVF--AASKDNSGNDSVRSYLKEIGEVKLLDADKEITLARQIARLLTLERVSARFKATYDRHPTIDEWAKAASTDPVTLRNALRSGLRAREHMVAANLRLVVSIAKRYLNRGLTFQDLIQEGSIGLIRGAEKFDGNKGFKFSTYATWWIRQAITRAIADHSRPIRLPVHVNDTIAAIRKTSKQLVIELSRPPTEFEIAERMQMSLEKLRFLTKSSRTTLSLETPIGREIRDSSATLGSFIEWSGDSPEDAIMKSLLREDLENVLNTLSPRERDVVRMRYGFDDGKMKTLEEIGSIFAVTRERIRQIEAKALRKLRHPTRNAVLREYVYEK 495
            R AV  P+S P          P  A     PLP    R   +   D  N +VLEAA   D  RE Y  T+ + P  +   TRTSRRKKG+A +K S +D   A    S  +  T+ +  ++N   F  A  K  S ND++RSYL+EIGEVKLLDADKEITLARQI++LL LER+SARFK+   RHP+I+EWA AAS D  T R  LR GLRA+EHMVAANLRLVVSIAK+YLNRGLTFQDLIQEGSIGLIRGAEKFDGNKGFKFSTYATWWIRQAITRAIADHSRPIRLPVHVNDTI+AIRKT+KQL  EL+RPP+E EIAERM++S+EKLRFLT+SSR+TLSLETPIGR+ RDS+ATLGSFIEW+GD+PE+A +KSLLRED+ENVLNTLSPRERDVVRMRYGFDDGKMKTLEEIG+IFAVTRERIRQIEAKALRKLRHPTRNAVLREYVYE+
Sbjct:  155 RTAVDAPVSAPPSVPHLTPRQPGSASESNRPLPTTSTR---RNREDYLNFKVLEAASREDRTREVYF-TAPQAPSRKKSTTRTSRRKKGSALQKHSVIDTNFAPDPSSPRSFRTSTSASSSNEDTFNTAQPKTTSANDTIRSYLREIGEVKLLDADKEITLARQISKLLALERISARFKSINGRHPSIEEWADAASMDHPTFRQVLRDGLRAKEHMVAANLRLVVSIAKKYLNRGLTFQDLIQEGSIGLIRGAEKFDGNKGFKFSTYATWWIRQAITRAIADHSRPIRLPVHVNDTISAIRKTTKQLFSELNRPPSESEIAERMRLSVEKLRFLTRSSRSTLSLETPIGRDSRDSAATLGSFIEWNGDTPEEATVKSLLREDIENVLNTLSPRERDVVRMRYGFDDGKMKTLEEIGTIFAVTRERIRQIEAKALRKLRHPTRNAVLREYVYEE 603          
BLAST of Ggra7768.t1 vs. uniprot
Match: R7QDV9 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QDV9_CHOCR)

HSP 1 Score: 483 bits (1244), Expect = 9.530e-166
Identity = 247/317 (77.92%), Postives = 278/317 (87.70%), Query Frame = 0
Query:  179 NDSVRSYLKEIGEVKLLDADKEITLARQIARLLTLERVSARFKATYDRHPTIDEWAKAASTDPVTLRNALRSGLRAREHMVAANLRLVVSIAKRYLNRGLTFQDLIQEGSIGLIRGAEKFDGNKGFKFSTYATWWIRQAITRAIADHSRPIRLPVHVNDTIAAIRKTSKQLVIELSRPPTEFEIAERMQMSLEKLRFLTKSSRTTLSLETPIGREIRDSSATLGSFIEWSGDSPEDAIMKSLLREDLENVLNTLSPRERDVVRMRYGFDDGKMKTLEEIGSIFAVTRERIRQIEAKALRKLRHPTRNAVLREYVYEK 495
            +DS+R YL EIGEVKLLDA+ EI LAR+IA+LL LER+SA  K      P I EWA AA  +    R  LR GLRA+EHMVAANLRLVVSIAK+YLNRGL+FQDLIQEGSIGLIRGAEKFDGNKGFKFSTYATWWIRQAITRAIADHSRPIRLPVHVNDTIAAI+K +K L  E++R PTE EIAER+Q+S+EKLRFL+ S+R T+SLETPIGR+ ++S+ATLGSFI W GD+PE++ MKSLLREDLENVLNTLSPRERDVVRMRYGFDDGKMKTLEEIG +FAVTRERIRQIEAKALRKLRHP RNAVLR+YVY++
Sbjct:   97 DDSIRRYLHEIGEVKLLDAESEINLAREIAKLLELERISATLKDANGFEPAIPEWAAAADMNIEVFRETLRRGLRAKEHMVAANLRLVVSIAKKYLNRGLSFQDLIQEGSIGLIRGAEKFDGNKGFKFSTYATWWIRQAITRAIADHSRPIRLPVHVNDTIAAIKKATKLLSTEMNRSPTETEIAERLQISIEKLRFLSTSARATISLETPIGRDGKESNATLGSFIVWEGDTPEESTMKSLLREDLENVLNTLSPRERDVVRMRYGFDDGKMKTLEEIGCLFAVTRERIRQIEAKALRKLRHPNRNAVLRDYVYDE 413          
BLAST of Ggra7768.t1 vs. uniprot
Match: A0A7S1TGP2 (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1TGP2_9RHOD)

HSP 1 Score: 409 bits (1052), Expect = 6.850e-137
Identity = 210/317 (66.25%), Postives = 254/317 (80.13%), Query Frame = 0
Query:  178 GNDSVRSYLKEIGEVKLLDADKEITLARQIARLLTLERVSARFKATYDRHPTIDEWAKAASTDPVTLRNALRSGLRAREHMVAANLRLVVSIAKRYLNRGLTFQDLIQEGSIGLIRGAEKFDGNKGFKFSTYATWWIRQAITRAIADHSRPIRLPVHVNDTIAAIRKTSKQLVIELSRPPTEFEIAERMQMSLEKLRFLTKSSRTTLSLETPIGREIRDSSATLGSFIEWSGDSPEDAIMKSLLREDLENVLNTLSPRERDVVRMRYGFDDGKMKTLEEIGSIFAVTRERIRQIEAKALRKLRHPTRNAVLREYVYE 494
            G DSV SYLKEIG  KLL ++ E+ LA+ I  LL  ER    F+    R P+  EWA   +      R  ++ G RA+E MVAANLRLVVSIAK+YLNRGL+FQDLIQEGSIGLIRG EKFD  KG+KFSTYATWWIRQAITRAIAD SRPIRLPVHVNDT++AI+K +K L  EL R P + EIAER++M ++K+RF+ +S+R+T+SLETPIG+E   S  TLG FIEW G++PE+ + K+LLREDLE+VL TLSPRER+V+RMRYGFDDG+MKTLEEIG +F+VTRERIRQIEAKALRKLRHPTRN +LREY+++
Sbjct:   87 GEDSVESYLKEIGTYKLLSSESEVELAKDIKMLLKYERRYTNFREGIGRIPSELEWAMECAVPLRDFRIRIQRGRRAKERMVAANLRLVVSIAKKYLNRGLSFQDLIQEGSIGLIRGTEKFDAEKGYKFSTYATWWIRQAITRAIADQSRPIRLPVHVNDTLSAIKKATKVLQHELGRAPDDEEIAERLKMPVDKVRFVARSARSTVSLETPIGKE---SENTLGCFIEWEGETPEEEVSKNLLREDLESVLRTLSPREREVIRMRYGFDDGRMKTLEEIGHLFSVTRERIRQIEAKALRKLRHPTRNGLLREYIFD 400          
BLAST of Ggra7768.t1 vs. uniprot
Match: A0A1X6NNE0 (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NNE0_PORUM)

HSP 1 Score: 414 bits (1065), Expect = 3.380e-136
Identity = 215/323 (66.56%), Postives = 257/323 (79.57%), Query Frame = 0
Query:  174 KDNSGNDSVRSYLKEIGEVKLLDADKEITLARQIARLLTLERVSARFKATYDRHPTIDEWAKAASTDPVTLRNALRSGLRAREHMVAANLRLVVSIAKRYLNRGLTFQDLIQEGSIGLIRGAEKFDGNKGFKFSTYATWWIRQAITRAIADHSRPIRLPVHVNDTIAAIRKTSKQLVIELSRPPTEFEIAERMQMSLEKLRFLTKSSRTTLSLETPIGREIRDS--SATLGSFIEWSGDSPEDAIMKSLLREDLENVLNTLSPRERDVVRMRYGFDDGKMKTLEEIGSIFAVTRERIRQIEAKALRKLRHPTRNAVLREYVYE 494
            +  +  D +R+YL+EIG   LL A  E+ LA +IA L  LER  A FK  Y R P+ +E A++ S D   LR  LR GLRA+E MV+ANLRLVVSIAK+YLNRGL  QDLIQEGSIGLIRGAEK+D +KGF+FSTYATWWIRQAITRAIADHSRPIRLPVHVNDT+AA+RK +K L  EL R PTE EI+ R  + L K+RFL  +S++T+SL+ PIG++  +   +ATLGSFI WSGD PE A  KSLLREDL+NVL+TLSPRERDV+R R+G DDG++KTLEEIG +F+VTRERIRQIEAKALRKLRHP +NAVLREYVY+
Sbjct:  266 RSQTSEDGMRAYLQEIGSESLLGAAMEVQLATEIAGLCELERAQASFKNDYSRFPSEEELAESMSLDVFALRRQLRCGLRAKERMVSANLRLVVSIAKKYLNRGLLLQDLIQEGSIGLIRGAEKYDASKGFRFSTYATWWIRQAITRAIADHSRPIRLPVHVNDTLAALRKCTKVLTTELGRTPTEEEISVRANLPLAKMRFLAHASQSTVSLDVPIGKKSGEDPGNATLGSFIVWSGDDPEAAATKSLLREDLDNVLDTLSPRERDVIRYRFGLDDGRVKTLEEIGCVFSVTRERIRQIEAKALRKLRHPGKNAVLREYVYD 588          
BLAST of Ggra7768.t1 vs. uniprot
Match: U5DMM6 (RNA polymerase sigma factor SigA n=1 Tax=Rubidibacter lacunae KORDI 51-2 TaxID=582515 RepID=U5DMM6_9CHRO)

HSP 1 Score: 404 bits (1039), Expect = 2.700e-135
Identity = 216/338 (63.91%), Postives = 264/338 (78.11%), Query Frame = 0
Query:  155 TATTAGAVRATNNAVFAASKDNSGNDSVRSYLKEIGEVKLLDADKEITLARQIARLLTLERVSARFKATYDRHPTIDEWAKAASTDPVTLRNALRSGLRAREHMVAANLRLVVSIAKRYLNRGLTFQDLIQEGSIGLIRGAEKFDGNKGFKFSTYATWWIRQAITRAIADHSRPIRLPVHVNDTIAAIRKTSKQLVIELSRPPTEFEIAERMQMSLEKLRFLTKSSRTTLSLETPIGREIRDSSATLGSFIEWSGDSPEDAIMKSLLREDLENVLNTLSPRERDVVRMRYGFDDGKMKTLEEIGSIFAVTRERIRQIEAKALRKLRHPTRNAVLREYV 492
            +AT A A RA       A K +   DS+R YL+EIG ++LL AD+EI LAR+IA LL LERV A    T +R P+  EWA+AA       R+ L  G RA+E MV +NLRLVVSIAK+Y+NRGL+FQDLIQEGS+GLIR AEKFD  KG+KFSTYATWWIRQAITRAIAD SR IRLPVH+ +TI+ I+KT+K L  E+ R PTE EIAERM+M++EKLRF+ KS++  +SLETPIG+E     + LG FIE  G++PED + K+LLREDLE+VL+TLSPRERDV+R+RYG +DG+MKTLEEIG IF VTRERIRQIEAKALRKLRHP RN++L+EY+
Sbjct:   40 SATRAKATRAATGRRDQAKKKSYTEDSIRLYLQEIGRIRLLRADEEIELARKIAELLELERVRADMMETLEREPSDREWAEAALMPLREFRSKLLVGRRAKEKMVQSNLRLVVSIAKKYMNRGLSFQDLIQEGSLGLIRAAEKFDHEKGYKFSTYATWWIRQAITRAIADQSRTIRLPVHLYETISRIKKTTKILSQEMGRKPTEEEIAERMEMTIEKLRFIAKSAQLPISLETPIGKE---EDSRLGDFIEADGETPEDEVSKNLLREDLEDVLDTLSPRERDVLRLRYGLEDGRMKTLEEIGQIFNVTRERIRQIEAKALRKLRHPNRNSILKEYI 374          
BLAST of Ggra7768.t1 vs. uniprot
Match: A0A5J4YYF1 (RNA polymerase sigma factor SigA n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YYF1_PORPP)

HSP 1 Score: 405 bits (1042), Expect = 7.190e-135
Identity = 210/314 (66.88%), Postives = 251/314 (79.94%), Query Frame = 0
Query:  180 DSVRSYLKEIGEVKLLDADKEITLARQIARLLTLERVSARFKATYDRHPTIDEWAKAASTDPVTLRNALRSGLRAREHMVAANLRLVVSIAKRYLNRGLTFQDLIQEGSIGLIRGAEKFDGNKGFKFSTYATWWIRQAITRAIADHSRPIRLPVHVNDTIAAIRKTSKQLVIELSRPPTEFEIAERMQMSLEKLRFLTKSSRTTLSLETPIGREIRDSSATLGSFIEWSGDSPEDAIMKSLLREDLENVLNTLSPRERDVVRMRYGFDDGKMKTLEEIGSIFAVTRERIRQIEAKALRKLRHPTRNAVLREYVY 493
            DSV++YL+EIGE  LL+++ E  L  +I +LL  ER    F+  +DR PT  EWA   + +    R AL  G RA+E MVAANLRLVVSIAKRYLNRGLTFQDLIQEGS+GLIRG EKFD +KGFKFSTYATWWIRQA+TRAI+DHSRPIRLPVHVNDT+A +R+ SK+L   L R PTE E+AERM + LEKL+F+ + +R+T+SLETPIG    D  +TL +FIE   D+PE  + KSLLREDLE VL TL+PRERDVVRMR+GFDDG+MKTLE+IG++F+VTRERIRQIE+KALRKLRHP RNA LREYVY
Sbjct:  124 DSVKAYLQEIGEYTLLNSESESALCSKIKQLLKFEREFEEFRELFDREPTEPEWAARCNVELSEFRVALHQGRRAKEQMVAANLRLVVSIAKRYLNRGLTFQDLIQEGSVGLIRGTEKFDADKGFKFSTYATWWIRQAMTRAISDHSRPIRLPVHVNDTLAHVRRYSKELQQGLGRAPTEEELAERMCLPLEKLQFMMRVARSTVSLETPIGD---DGDSTLANFIECDRDTPEQDVTKSLLREDLEAVLETLTPRERDVVRMRFGFDDGRMKTLEQIGNMFSVTRERIRQIESKALRKLRHPNRNAALREYVY 434          
BLAST of Ggra7768.t1 vs. uniprot
Match: A0A7S3EI06 (Hypothetical protein n=11 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3EI06_9RHOD)

HSP 1 Score: 405 bits (1040), Expect = 4.870e-134
Identity = 209/318 (65.72%), Postives = 251/318 (78.93%), Query Frame = 0
Query:  176 NSGNDSVRSYLKEIGEVKLLDADKEITLARQIARLLTLERVSARFKATYDRHPTIDEWAKAASTDPVTLRNALRSGLRAREHMVAANLRLVVSIAKRYLNRGLTFQDLIQEGSIGLIRGAEKFDGNKGFKFSTYATWWIRQAITRAIADHSRPIRLPVHVNDTIAAIRKTSKQLVIELSRPPTEFEIAERMQMSLEKLRFLTKSSRTTLSLETPIGREIRDSSATLGSFIEWSGDSPEDAIMKSLLREDLENVLNTLSPRERDVVRMRYGFDDGKMKTLEEIGSIFAVTRERIRQIEAKALRKLRHPTRNAVLREYVY 493
            N   DSV+SYL+EIG+ KLL A+ EI LAR I  LL LER  + F     R PT  EWA+    D    +  L  G  A+E MV+ANLRLVVSIAK+YLNRGL+FQDLIQEGSIGLI+G EKFD +KGFKFSTYATWWIRQ+ITRAIAD SRPIRLPVHVNDTI ++RK SK L +EL RPP+E E A+RM++ ++KLRF+ + +R+TLSLETP+G      S TL SFIEW+G+SPE+   KSLLREDL++VL TL+ RERDV+RMRYG DDGK KTLEEIG+ FAVTRERIRQIE+KAL+KLR+P+RN+ L+EYVY
Sbjct:  153 NQARDSVKSYLQEIGKTKLLKAEMEIELARSIQMLLGLERTRSEFIEKVGRSPTDAEWAQECDLDYSQFKKNLYCGRLAKEKMVSANLRLVVSIAKKYLNRGLSFQDLIQEGSIGLIKGTEKFDADKGFKFSTYATWWIRQSITRAIADFSRPIRLPVHVNDTITSVRKVSKALEVELGRPPSEKETADRMEIPVDKLRFVLRCARSTLSLETPVGGPDDKESTTLASFIEWNGESPEEKAEKSLLREDLDSVLGTLNARERDVIRMRYGLDDGKAKTLEEIGTHFAVTRERIRQIESKALKKLRNPSRNSPLKEYVY 470          
BLAST of Ggra7768.t1 vs. uniprot
Match: A0A5B8NHW9 (RNA polymerase sigma factor SigA n=2 Tax=Cyanobacteria TaxID=1117 RepID=A0A5B8NHW9_9CHRO)

HSP 1 Score: 400 bits (1029), Expect = 1.980e-133
Identity = 208/319 (65.20%), Postives = 253/319 (79.31%), Query Frame = 0
Query:  174 KDNSGNDSVRSYLKEIGEVKLLDADKEITLARQIARLLTLERVSARFKATYDRHPTIDEWAKAASTDPVTLRNALRSGLRAREHMVAANLRLVVSIAKRYLNRGLTFQDLIQEGSIGLIRGAEKFDGNKGFKFSTYATWWIRQAITRAIADHSRPIRLPVHVNDTIAAIRKTSKQLVIELSRPPTEFEIAERMQMSLEKLRFLTKSSRTTLSLETPIGREIRDSSATLGSFIEWSGDSPEDAIMKSLLREDLENVLNTLSPRERDVVRMRYGFDDGKMKTLEEIGSIFAVTRERIRQIEAKALRKLRHPTRNAVLREYV 492
            K +   DS+R YL+EIG ++LL AD+EI LAR+IA LL LER     +AT    PT++EWA+         R  L  G RA+E MV +NLRLVVSIAK+Y+NRGL+FQDLIQEGS+GLIR AEKFD  KG+KFSTYATWWIRQAITRAIAD SR IRLPVH+ +TI+ I+KT+K L  EL R PTE EIAERM+M++EKLRF+ KS++  +SLETPIG+E     + LG FIE  G++PED + KSLLREDLE+VL+TLSPRERDV+R+RYG +DG+MKTLEEIG IF VTRERIRQIEAKALRKLRHP RN++L+EY+
Sbjct:   82 KKSYTEDSIRLYLQEIGRIRLLRADEEIELARKIADLLELERKRTELEATIGSEPTLEEWAQEVDMPLPKFRRRLMLGRRAKEKMVQSNLRLVVSIAKKYMNRGLSFQDLIQEGSLGLIRAAEKFDHEKGYKFSTYATWWIRQAITRAIADQSRTIRLPVHLYETISRIKKTTKVLSQELGRKPTEEEIAERMEMTIEKLRFIAKSAQLPISLETPIGKE---EDSRLGDFIEADGETPEDEVSKSLLREDLEDVLDTLSPRERDVLRLRYGLEDGRMKTLEEIGQIFNVTRERIRQIEAKALRKLRHPNRNSILKEYI 397          
BLAST of Ggra7768.t1 vs. uniprot
Match: K9W354 (RNA polymerase sigma factor SigA n=1 Tax=Crinalium epipsammum PCC 9333 TaxID=1173022 RepID=K9W354_9CYAN)

HSP 1 Score: 399 bits (1026), Expect = 3.270e-133
Identity = 208/319 (65.20%), Postives = 253/319 (79.31%), Query Frame = 0
Query:  174 KDNSGNDSVRSYLKEIGEVKLLDADKEITLARQIARLLTLERVSARFKATYDRHPTIDEWAKAASTDPVTLRNALRSGLRAREHMVAANLRLVVSIAKRYLNRGLTFQDLIQEGSIGLIRGAEKFDGNKGFKFSTYATWWIRQAITRAIADHSRPIRLPVHVNDTIAAIRKTSKQLVIELSRPPTEFEIAERMQMSLEKLRFLTKSSRTTLSLETPIGREIRDSSATLGSFIEWSGDSPEDAIMKSLLREDLENVLNTLSPRERDVVRMRYGFDDGKMKTLEEIGSIFAVTRERIRQIEAKALRKLRHPTRNAVLREYV 492
            K +   DS+R YL+EIG ++LL AD+EI LAR+IA LL LERV  + KA  DR P   EWA A        R+ L  G RA++ MV +NLRLVVSIAK+Y+NRGL+FQDLIQEGS+GLIR AEKFD  KG+KFSTYATWWIRQAITRAIAD SR IRLPVH+ +TI+ I+KT+K L  E+ R PTE EIA RM+M++EKLRF+ KS++  +SLETPIG+E     + LG FIE  G++PED + K+LLREDLE+VL+TLSPRERDV+R+RYG DDG+MKTLEEIG IF VTRERIRQIEAKALRKLRHP RN++L+EY+
Sbjct:   67 KKHYTEDSIRLYLQEIGRIRLLRADEEIELARKIAELLQLERVYEQLKAQLDREPKDSEWALAVEMPLPQFRHRLYLGRRAKDKMVQSNLRLVVSIAKKYMNRGLSFQDLIQEGSLGLIRAAEKFDHEKGYKFSTYATWWIRQAITRAIADQSRTIRLPVHLYETISRIKKTTKLLSQEMGRKPTEEEIATRMEMTIEKLRFIAKSAQLPISLETPIGKE---EDSRLGDFIEADGETPEDEVSKNLLREDLESVLDTLSPRERDVLRLRYGLDDGRMKTLEEIGQIFNVTRERIRQIEAKALRKLRHPNRNSILKEYI 382          
BLAST of Ggra7768.t1 vs. uniprot
Match: A0A1E5QG44 (RNA polymerase sigma factor SigA n=2 Tax=unclassified Desertifilum TaxID=2621682 RepID=A0A1E5QG44_9CYAN)

HSP 1 Score: 399 bits (1025), Expect = 3.650e-133
Identity = 208/319 (65.20%), Postives = 253/319 (79.31%), Query Frame = 0
Query:  174 KDNSGNDSVRSYLKEIGEVKLLDADKEITLARQIARLLTLERVSARFKATYDRHPTIDEWAKAASTDPVTLRNALRSGLRAREHMVAANLRLVVSIAKRYLNRGLTFQDLIQEGSIGLIRGAEKFDGNKGFKFSTYATWWIRQAITRAIADHSRPIRLPVHVNDTIAAIRKTSKQLVIELSRPPTEFEIAERMQMSLEKLRFLTKSSRTTLSLETPIGREIRDSSATLGSFIEWSGDSPEDAIMKSLLREDLENVLNTLSPRERDVVRMRYGFDDGKMKTLEEIGSIFAVTRERIRQIEAKALRKLRHPTRNAVLREYV 492
            K +   DS+R YL+EIG ++LL AD+EI LAR+IA LL LER+  +     DR P   EWA+A S    + R+ L  G RA++ MV +NLRLVVSIAK+Y+NRGL+FQDLIQEGS+GLIR AEKFD  KG+KFSTYATWWIRQAITRAIAD SR IRLPVH+ +TI+ I+KT+K L  E+ R PTE EIAERM+M++EKLRF+ KS++  +SLETPIG+E     + LG FIE  G++PED + K+LLREDLE VL TLSPRERDV+R+RYG DDG+MKTLEEIG IF VTRERIRQIEAKALRKLRHP RN+VL+EY+
Sbjct:   60 KKHYTEDSIRLYLQEIGRIRLLRADEEIELARKIADLLELERIREQLMDRLDREPHDAEWAEAVSMPLQSFRHRLHVGRRAKDKMVQSNLRLVVSIAKKYMNRGLSFQDLIQEGSLGLIRAAEKFDHEKGYKFSTYATWWIRQAITRAIADQSRTIRLPVHLYETISRIKKTTKLLSQEMGRKPTEEEIAERMEMTIEKLRFIAKSAQLPISLETPIGKE---EDSRLGDFIESDGETPEDQVSKNLLREDLEGVLGTLSPRERDVLRLRYGLDDGRMKTLEEIGQIFNVTRERIRQIEAKALRKLRHPNRNSVLKEYI 375          
The following BLAST results are available for this feature:
BLAST of Ggra7768.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IWX52.130e-20169.98RNA polymerase sigma factor SigA n=1 Tax=Gracilari... [more]
R7QDV99.530e-16677.92Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A7S1TGP26.850e-13766.25Hypothetical protein n=1 Tax=Compsopogon caeruleus... [more]
A0A1X6NNE03.380e-13666.56Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
U5DMM62.700e-13563.91RNA polymerase sigma factor SigA n=1 Tax=Rubidibac... [more]
A0A5J4YYF17.190e-13566.88RNA polymerase sigma factor SigA n=1 Tax=Porphyrid... [more]
A0A7S3EI064.870e-13465.72Hypothetical protein n=11 Tax=Rhodosorus marinus T... [more]
A0A5B8NHW91.980e-13365.20RNA polymerase sigma factor SigA n=2 Tax=Cyanobact... [more]
K9W3543.270e-13365.20RNA polymerase sigma factor SigA n=1 Tax=Crinalium... [more]
A0A1E5QG443.650e-13365.20RNA polymerase sigma factor SigA n=2 Tax=unclassif... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000943RNA polymerase sigma-70PRINTSPR00046SIGMA70FCTcoord: 468..479
score: 69.78
coord: 453..468
score: 60.32
coord: 432..444
score: 49.28
coord: 282..295
score: 62.81
coord: 306..314
score: 89.82
IPR000943RNA polymerase sigma-70PROSITEPS00716SIGMA70_2coord: 453..479
IPR000943RNA polymerase sigma-70PROSITEPS00715SIGMA70_1coord: 282..295
IPR036388Winged helix-like DNA-binding domain superfamilyGENE3D1.10.10.10coord: 331..408
e-value: 3.1E-19
score: 71.2
IPR036388Winged helix-like DNA-binding domain superfamilyGENE3D1.10.10.10coord: 415..495
e-value: 4.2E-33
score: 114.9
IPR014284RNA polymerase sigma-70 like domainTIGRFAMTIGR02937TIGR02937coord: 254..481
e-value: 1.0E-39
score: 133.8
IPR007624RNA polymerase sigma-70 region 3PFAMPF04539Sigma70_r3coord: 338..415
e-value: 1.1E-13
score: 51.1
IPR009042RNA polymerase sigma-70 region 1.2PFAMPF00140Sigma70_r1_2coord: 180..210
e-value: 2.5E-10
score: 40.2
IPR007627RNA polymerase sigma-70 region 2PFAMPF04542Sigma70_r2coord: 258..327
e-value: 4.4E-21
score: 74.4
NoneNo IPR availableGENE3D1.20.120.1810coord: 179..327
e-value: 1.1E-48
score: 167.6
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..29
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 124..144
NoneNo IPR availablePANTHERPTHR30603RNA POLYMERASE SIGMA FACTOR RPOcoord: 128..492
NoneNo IPR availablePANTHERPTHR30603:SF45RNA POLYMERASE SIGMA FACTOR SIGF, CHLOROPLASTICcoord: 128..492
NoneNo IPR availableCDDcd06171Sigma70_r4coord: 422..480
e-value: 3.00975E-14
score: 65.2034
IPR007630RNA polymerase sigma-70 region 4PFAMPF04545Sigma70_r4coord: 428..481
e-value: 7.9E-20
score: 70.1
IPR013324RNA polymerase sigma factor, region 3/4-likeSUPERFAMILY88659Sigma3 and sigma4 domains of RNA polymerase sigma factorscoord: 331..393
IPR013324RNA polymerase sigma factor, region 3/4-likeSUPERFAMILY88659Sigma3 and sigma4 domains of RNA polymerase sigma factorscoord: 396..491
IPR013325RNA polymerase sigma factor, region 2SUPERFAMILY88946Sigma2 domain of RNA polymerase sigma factorscoord: 178..327

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000088_piloncontigtig00000088_pilon:418303..419790 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra7768.t1Ggra7768.t1Gracilaria gracilis GNS1m malemRNAtig00000088_pilon 418303..419790 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra7768.t1 ID=Ggra7768.t1|Name=Ggra7768.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=496bp
MHMIRAPPTAPPSRVSTAPPLVSPDAVPRTTRSTVSTVAAVAAAAAAKRA
AVHVPISPPLPAAPPVAPAPAVAFSETEPLPADPQRGFLKRNGDECNLQV
LEAAREGDLVREDYLATSKEVPVIRPKQTRTSRRKKGAASRKRSAVDDQL
ASGYTATTAGAVRATNNAVFAASKDNSGNDSVRSYLKEIGEVKLLDADKE
ITLARQIARLLTLERVSARFKATYDRHPTIDEWAKAASTDPVTLRNALRS
GLRAREHMVAANLRLVVSIAKRYLNRGLTFQDLIQEGSIGLIRGAEKFDG
NKGFKFSTYATWWIRQAITRAIADHSRPIRLPVHVNDTIAAIRKTSKQLV
IELSRPPTEFEIAERMQMSLEKLRFLTKSSRTTLSLETPIGREIRDSSAT
LGSFIEWSGDSPEDAIMKSLLREDLENVLNTLSPRERDVVRMRYGFDDGK
MKTLEEIGSIFAVTRERIRQIEAKALRKLRHPTRNAVLREYVYEK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000943RNA_pol_sigma70
IPR036388WH-like_DNA-bd_sf
IPR014284RNA_pol_sigma-70_dom
IPR007624RNA_pol_sigma70_r3
IPR009042RNA_pol_sigma70_r1_2
IPR007627RNA_pol_sigma70_r2
IPR007630RNA_pol_sigma70_r4
IPR013324RNA_pol_sigma_r3/r4-like
IPR013325RNA_pol_sigma_r2