Ggra7754.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra7754.t1
Unique NameGgra7754.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length202
Homology
BLAST of Ggra7754.t1 vs. uniprot
Match: A0A2V3IWL9 (Protein SCO1-like n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IWL9_9FLOR)

HSP 1 Score: 285 bits (730), Expect = 3.560e-95
Identity = 137/196 (69.90%), Postives = 159/196 (81.12%), Query Frame = 0
Query:    1 MGTGALMYYSGERERQLRAVTRTRTVGKAAIGGAFELRDARGDVFTQQRLVGKWSVIYFGFTMCPDICPAEMSKIGDALRMLQKGGIRVGEAAQGDVLALFVTVDPQRDDAARADEYAKMFHPAFVGLGGSEQQIAHMAKQYRVYYSRDQGADDDYLVDHSIITYLMDPDGQFVEFYGKNCSAAEMAAKMRTHMLA 196
            +G+G L  YS ERERQ+ AVTR RTVGKAAIGGAFEL+DARG  FT+QRL+GKWS+IYFGF MCPDICPAEM+K+ DAL  L++ G+RVG      V  +F+TVD +RDDA RADEYAK FH  FVGL G+E Q+ H AKQYRVYYSRD G  D+YLVDHSIITYLMDP+G+FVEFYGKN SAAEMAA++   MLA
Sbjct:   36 LGSGGLALYSRERERQIAAVTRPRTVGKAAIGGAFELQDARGARFTEQRLLGKWSLIYFGFCMCPDICPAEMTKVADALSTLERRGLRVGHEEGCRVAPIFITVDAERDDAERADEYAKAFHKGFVGLAGTEAQVRHTAKQYRVYYSRDDGEGDEYLVDHSIITYLMDPNGEFVEFYGKNSSAAEMAARVEGRMLA 231          
BLAST of Ggra7754.t1 vs. uniprot
Match: R7QCB0 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QCB0_CHOCR)

HSP 1 Score: 222 bits (565), Expect = 7.830e-70
Identity = 112/201 (55.72%), Postives = 144/201 (71.64%), Query Frame = 0
Query:    2 GTGALMYYSGERERQL---RAVTRTRTVGKAAIGGAFELRD-ARGDVFTQQRLVGKWSVIYFGFTMCPDICPAEMSKIGDALRMLQKGGIRVGEAAQGD--VLALFVTVDPQRDDAARADEYAKMFHPAFVGLGGSEQQIAHMAKQYRVYYSRDQGADDDYLVDHSIITYLMDPDGQFVEFYGKNCSAAEMAAKMRTHMLA 196
            GT  L YYS +++ ++   R + R +TVGKAAIGGAF L D + G    +  L+G+W+++YFGFTMCPD+CPAE++K+G+AL ML+  G RV    +G   V  +F++VDP RD   RA EYA  FH AFVGL GS++Q+   AK YRVYYSRD G  D+YLVDHSIITYLMDP G+F EFYG N SAAE+AA++   MLA
Sbjct:   51 GTAGLGYYSVKKQARMEGKRDIMRPQTVGKAAIGGAFSLVDGSSGAAVDETFLLGRWTLVYFGFTMCPDVCPAELTKVGEALTMLEGRGRRVRRDGKGGSVVTPVFISVDPARDSPERAAEYAAGFHKAFVGLSGSDEQVRQAAKAYRVYYSRDGGEGDEYLVDHSIITYLMDPGGEFREFYGTNSSAAEIAARVEAQMLA 251          
BLAST of Ggra7754.t1 vs. uniprot
Match: A0A2P6VDU3 (SCO1-like protein mitochondrial n=1 Tax=Micractinium conductrix TaxID=554055 RepID=A0A2P6VDU3_9CHLO)

HSP 1 Score: 191 bits (486), Expect = 1.040e-57
Identity = 95/195 (48.72%), Postives = 132/195 (67.69%), Query Frame = 0
Query:    4 GALMYYSGERERQLRAVTR----TRTVGKAAIGGAFELRDARGDVFTQQRLVGKWSVIYFGFTMCPDICPAEMSKIGDALRMLQKGGIRVGEAAQGDVLALFVTVDPQRDDAARADEYAKMFHPAFVGLGGSEQQIAHMAKQYRVYYSRDQGADDDYLVDHSIITYLMDPDGQFVEFYGKNCSAAEMAAKMRTHM 194
            G L +Y+ E+E++L  ++R    +  VG+AAIGG FEL D RG  FT++ L+G+++++YFGFT CPD+CP E+ KI  A    +K       A    V+ +F++VDPQRD   +  +Y K FHP  +GL G+ +Q    AK YRVYYS+ Q +DDDYLVDHSIITYL++PDG+FV FYGKN +A EMA  +  H+
Sbjct:   69 GLLWWYNHEKEKKLEDISREGKSSVVVGQAAIGGPFELVDHRGKRFTEKDLLGQFALMYFGFTWCPDVCPEELEKIAAATDKTEK-------ATGVQVVPVFLSVDPQRDGVEQVRDYVKEFHPRMIGLTGTYEQTGAAAKTYRVYYSKTQDSDDDYLVDHSIITYLINPDGKFVTFYGKNFTADEMAQNISDHV 256          
BLAST of Ggra7754.t1 vs. uniprot
Match: E1ZGV7 (Thioredoxin domain-containing protein n=1 Tax=Chlorella variabilis TaxID=554065 RepID=E1ZGV7_CHLVA)

HSP 1 Score: 190 bits (482), Expect = 1.750e-57
Identity = 92/198 (46.46%), Postives = 135/198 (68.18%), Query Frame = 0
Query:    2 GTGALMYYSGERERQLRAVTR----TRTVGKAAIGGAFELRDARGDVFTQQRLVGKWSVIYFGFTMCPDICPAEMSKIGDALRMLQK-GGIRVGEAAQGDVLALFVTVDPQRDDAARADEYAKMFHPAFVGLGGSEQQIAHMAKQYRVYYSRDQGADDDYLVDHSIITYLMDPDGQFVEFYGKNCSAAEMAAKMRTHM 194
            G G L +Y+ E+E++L  +TR    +  VG+AAIGG F+L D  G  FT + L+G+++++YFGFT CPDICP E+ KI  A  + +K  G++V        + +F++VDPQRD   +  +Y K FHP  +GL G  +++   AK YRVY+S+ Q ++DDYLVDHSIITYL++P+G+FV FYGKN +A EMA  + +H+
Sbjct:   41 GAGLLWWYNHEKEKKLEEITREGKSSVVVGQAAIGGPFDLIDHTGKRFTDKDLLGRFALLYFGFTWCPDICPEELEKIAAATDLTEKLSGVQV--------VPVFLSVDPQRDGVEQVRDYVKEFHPRMIGLTGPYERVGEAAKAYRVYFSKTQDSEDDYLVDHSIITYLINPEGKFVSFYGKNFTAEEMAKSIASHV 230          
BLAST of Ggra7754.t1 vs. uniprot
Match: A4SAB9 (Uncharacterized protein n=2 Tax=Ostreococcus sp. 'lucimarinus' TaxID=242159 RepID=A4SAB9_OSTLU)

HSP 1 Score: 186 bits (472), Expect = 2.690e-55
Identity = 91/209 (43.54%), Postives = 131/209 (62.68%), Query Frame = 0
Query:    2 GTGALMYYSGERERQLRAVTRTRTV----------GKAAIGGAFELRDAR-GDVFTQQRLVGKWSVIYFGFTMCPDICPAEMSKIGDALRMLQKGGIRVGEAAQGDVLALFVTVDPQRDDAARADEYAKMFHPAFVGLGGSEQQIAHMAKQYRVYYSR--DQGADDDYLVDHSIITYLMDPDGQFVEFYGKNCSAAEMAAKMRTHMLAH 197
            G   L +Y  ER+R++  V   +T           GKA++GGAF L D+R G  FT + L+GKW+++YFGFT CPDICP E+ K+ +    +     +  +     ++ +F+++DP RD A R  EY K FH   +GL GSE+Q    A++YRVYY +  D+ A DDYLVDHSIITYL++P+G+FV FYGKN +  E+ A +R H+ A+
Sbjct:   80 GATCLYFYDRERQRRVDGVRAAKTQSNGFQTNVAGGKASVGGAFRLTDSRTGKAFTDKDLLGKWAMLYFGFTHCPDICPDELEKVAEVTTSINSTLEKKHDGTAARLVPVFISIDPSRDTAKRVKEYVKEFHADMIGLTGSEKQCEDAARKYRVYYRKTGDEAAKDDYLVDHSIITYLLNPEGEFVTFYGKNTTEKEVIASVRGHIEAY 288          
BLAST of Ggra7754.t1 vs. uniprot
Match: M2WYY9 (Inner mitochondrial membrane protein Sco1p n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2WYY9_GALSU)

HSP 1 Score: 181 bits (460), Expect = 7.750e-54
Identity = 88/196 (44.90%), Postives = 136/196 (69.39%), Query Frame = 0
Query:    1 MGTGALMYYSGERERQLRAVT-RTRTVGKAAIGGAFELRDARGDVFTQQRLVGKWSVIYFGFTMCPDICPAEMSKIGDALRMLQKGGIRVGEAAQGDVLALFVTVDPQRDDAARADEYAKMFHPAFVGLGGSEQQIAHMAKQYRVYYSRDQG-ADDDYLVDHSIITYLMDPDGQFVEFYGKNCSAAEMAAKMRTHM 194
            +G+G L  Y+  +++++  +  + + +G+ AIGG FEL D  G V T +   GK+ +IYFGFT CPD+CP E++K+ +A+ +L+K   R+G +A   ++ +F++VDPQRD + +   Y K FHP FVGL G+ +Q+  +AK YRV++S+D+    DDYLVDHSIITYL+ PDG FV F+GK+ SA +MA K+  ++
Sbjct:   72 LGSGLLFLYAQMKDKKVEKLRYQQKDLGQPAIGGPFELLDMNGKVVTDKDFRGKFMLIYFGFTFCPDVCPEELNKMTEAMNILEK---RMGSSAD-KIVPVFISVDPQRDTSHQIKSYLKDFHPRFVGLTGTPEQVEKVAKSYRVFFSKDRDDGSDDYLVDHSIITYLVAPDGNFVTFFGKSTSADDMAKKIAEYL 263          
BLAST of Ggra7754.t1 vs. uniprot
Match: A0A2V0NRL7 (Thioredoxin domain-containing protein n=1 Tax=Raphidocelis subcapitata TaxID=307507 RepID=A0A2V0NRL7_9CHLO)

HSP 1 Score: 184 bits (467), Expect = 1.950e-53
Identity = 87/171 (50.88%), Postives = 116/171 (67.84%), Query Frame = 0
Query:   24 RTVGKAAIGGAFELRDARGDVFTQQRLVGKWSVIYFGFTMCPDICPAEMSKIGDALRMLQKGGIRVGEAAQGDVLALFVTVDPQRDDAARADEYAKMFHPAFVGLGGSEQQIAHMAKQYRVYYSRDQGADDDYLVDHSIITYLMDPDGQFVEFYGKNCSAAEMAAKMRTHM 194
            + VGKAA+GG F L D  G  FT + L+GKWSV+YFGFT CPDICP E+ K+ +A+ ++++    +       VL +F+TVDPQRD  A+   Y K FHP  VGL GSE+ +  ++K YRVY+ +     DDYLVDHSIITYL+DP+G+FV FYGKN  A  +AA +  H+
Sbjct:  183 QVVGKAAVGGPFSLVDQDGKPFTHRDLLGKWSVLYFGFTHCPDICPDELEKLAEAMDLVERNQKEL-------VLPVFITVDPQRDSPAKVKAYVKEFHPRLVGLTGSEEAVKAVSKAYRVYFHKTTDDADDYLVDHSIITYLIDPNGEFVTFYGKNFDAKGLAASIGQHI 346          
BLAST of Ggra7754.t1 vs. uniprot
Match: A0A2P6TSR6 (SCO1-like protein mitochondrial n=1 Tax=Chlorella sorokiniana TaxID=3076 RepID=A0A2P6TSR6_CHLSO)

HSP 1 Score: 180 bits (457), Expect = 2.850e-53
Identity = 89/198 (44.95%), Postives = 131/198 (66.16%), Query Frame = 0
Query:    2 GTGALMYYSGERERQLRAVTR----TRTVGKAAIGGAFELRDARGDVFTQQRLVGKWSVIYFGFTMCPDICPAEMSKIGDALRMLQK-GGIRVGEAAQGDVLALFVTVDPQRDDAARADEYAKMFHPAFVGLGGSEQQIAHMAKQYRVYYSRDQGADDDYLVDHSIITYLMDPDGQFVEFYGKNCSAAEMAAKMRTHM 194
            G G L +Y+ E+E+++    R    +  VG+A IGG F+L D  G  FT + L+G+++++YFGFT CPDICP E+ KI  A  + +K  G++V        + +F++VDPQRD   +  +Y K FHP  +GL GS +++   AK YRVY+S+ Q ++DDYLVDHSIITYL++P+G+FV FYGKN +  EMA  +  H+
Sbjct:   70 GAGLLWWYNHEKEQKMEDFGRDGKSSVVVGQAVIGGPFDLIDHTGKRFTDKDLLGQFALLYFGFTWCPDICPEELEKIAAATDLTEKLTGVQV--------VPVFLSVDPQRDGVEQVRDYVKEFHPRMIGLTGSYERVGEAAKAYRVYFSKTQDSEDDYLVDHSIITYLINPEGKFVTFYGKNFTKEEMARNISDHV 259          
BLAST of Ggra7754.t1 vs. uniprot
Match: A0A096PA16 (Thioredoxin-like fold n=2 Tax=Ostreococcus tauri TaxID=70448 RepID=A0A096PA16_OSTTA)

HSP 1 Score: 179 bits (455), Expect = 3.590e-53
Identity = 97/213 (45.54%), Postives = 130/213 (61.03%), Query Frame = 0
Query:    2 GTGALMYYSGERERQL--------RAVTRTRTV---GKAAIGGAFELRDA-RGDVFTQQRLVGKWSVIYFGFTMCPDICPAEMSKIGDALRMLQKGGIRVGEAAQGD----VLALFVTVDPQRDDAARADEYAKMFHPAFVGLGGSEQQIAHMAKQYRVYYSR--DQGADDDYLVDHSIITYLMDPDGQFVEFYGKNCSAAEMAAKMRTHMLA 196
            G G L YY GER R+L        +A    +TV   GKAA+GGAF L +A  G  FT + L G+++++YFGFT CPD+CP E+ K+   +  +        E   GD    V  +F+T+DP RDD  R  EY K FHP  +GL G+E+Q A  A++YRVY+ +  D+ A  DYLVDHSIITYL+DP+G FV FYGKN +  E+A  +  H+ A
Sbjct:   35 GAGLLYYYDGERHRRLDARKAEANQATNGFQTVVAGGKAAVGGAFTLVNAANGKAFTDENLRGRFAILYFGFTHCPDVCPDELEKVAAVVDDVDARLREAKEHVDGDDTLTVQPVFITIDPYRDDKRRVAEYVKEFHPKMIGLTGTEKQTADAARKYRVYFRKTGDEKAKSDYLVDHSIITYLVDPNGDFVTFYGKNTTEKEVADSILGHVRA 247          
BLAST of Ggra7754.t1 vs. uniprot
Match: A0A7S2JNS5 (Hypothetical protein n=1 Tax=Cyanoptyche gloeocystis TaxID=77922 RepID=A0A7S2JNS5_9EUKA)

HSP 1 Score: 180 bits (457), Expect = 5.920e-53
Identity = 85/201 (42.29%), Postives = 129/201 (64.18%), Query Frame = 0
Query:    1 MGTGALMYYSGERERQLRAVTRTRTVGKAAIGGAFELRDARGDVFTQQRLVGKWSVIYFGFTMCPDICPAEMSKIGDALRMLQKGGIRVGEAAQGDVLALFVTVDPQRDDAARADEYAKMFHPAFVGLGGSEQQIAHMAKQYRVYYSRDQGADDDYLVDHSIITYLMDPDGQFVEFYGKNCSAAEMA----AKMRTHMLAH 197
            +G G L YY   ++++    +R ++VGK  +GG FEL D  G   T +   GKW ++YFGFT CPDICP E+ K+ +A+ ML K    VG   Q     +F+++DP RD  ++   Y + FHP  +GL GSE+Q+A  A  YRVY+SR +G  ++YL+DHSII YL+DP G+FV+++GKN +A ++A     ++R++ + H
Sbjct:   87 VGAGVLGYYDYVQQKRKAEESRIKSVGKTLLGGPFELVDHTGATVTDESYRGKWLLMYFGFTFCPDICPDELEKMAEAINMLDKNR-SVGPVVQ----PVFISIDPARDTVSKVASYVQEFHPRMIGLTGSEEQVAKAAAAYRVYFSRAEGQGEEYLIDHSIIMYLVDPSGKFVDYFGKNYTAQQLADAVAERVRSYDIEH 282          
The following BLAST results are available for this feature:
BLAST of Ggra7754.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IWL93.560e-9569.90Protein SCO1-like n=1 Tax=Gracilariopsis chorda Ta... [more]
R7QCB07.830e-7055.72Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A2P6VDU31.040e-5748.72SCO1-like protein mitochondrial n=1 Tax=Micractini... [more]
E1ZGV71.750e-5746.46Thioredoxin domain-containing protein n=1 Tax=Chlo... [more]
A4SAB92.690e-5543.54Uncharacterized protein n=2 Tax=Ostreococcus sp. '... [more]
M2WYY97.750e-5444.90Inner mitochondrial membrane protein Sco1p n=1 Tax... [more]
A0A2V0NRL71.950e-5350.88Thioredoxin domain-containing protein n=1 Tax=Raph... [more]
A0A2P6TSR62.850e-5344.95SCO1-like protein mitochondrial n=1 Tax=Chlorella ... [more]
A0A096PA163.590e-5345.54Thioredoxin-like fold n=2 Tax=Ostreococcus tauri T... [more]
A0A7S2JNS55.920e-5342.29Hypothetical protein n=1 Tax=Cyanoptyche gloeocyst... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.30.10Glutaredoxincoord: 13..199
e-value: 7.8E-56
score: 190.4
NoneNo IPR availablePIRSRPIRSR037736-1PIRSR037736-1coord: 27..186
e-value: 3.2E-51
score: 170.0
IPR003782Copper chaperone SCO1/SenCPFAMPF02630SCO1-SenCcoord: 32..173
e-value: 1.8E-42
score: 144.5
IPR003782Copper chaperone SCO1/SenCPANTHERPTHR12151ELECTRON TRANSPORT PROTIN SCO1/SENC FAMILY MEMBERcoord: 2..196
IPR003782Copper chaperone SCO1/SenCCDDcd02968SCOcoord: 31..178
e-value: 9.0747E-61
score: 184.344
IPR036249Thioredoxin-like superfamilySUPERFAMILY52833Thioredoxin-likecoord: 31..193

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000088_piloncontigtig00000088_pilon:332608..333306 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra7754.t1Ggra7754.t1Gracilaria gracilis GNS1m malemRNAtig00000088_pilon 332608..333306 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra7754.t1 ID=Ggra7754.t1|Name=Ggra7754.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=202bp
MGTGALMYYSGERERQLRAVTRTRTVGKAAIGGAFELRDARGDVFTQQRL
VGKWSVIYFGFTMCPDICPAEMSKIGDALRMLQKGGIRVGEAAQGDVLAL
FVTVDPQRDDAARADEYAKMFHPAFVGLGGSEQQIAHMAKQYRVYYSRDQ
GADDDYLVDHSIITYLMDPDGQFVEFYGKNCSAAEMAAKMRTHMLAHAPR
R*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003782SCO1/SenC
IPR036249Thioredoxin-like_sf