Ggra7752.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra7752.t1
Unique NameGgra7752.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length376
Homology
BLAST of Ggra7752.t1 vs. uniprot
Match: DEAD/DEAH box helicase family protein n=6 Tax=unclassified Coleofasciculus TaxID=2692782 RepID=UPI001F55A29E (DEAD/DEAH box helicase family protein n=6 Tax=unclassified Coleofasciculus TaxID=2692782 RepID=UPI001F55A29E)

HSP 1 Score: 95.9 bits (237), Expect = 9.900e-18
Identity = 91/298 (30.54%), Postives = 129/298 (43.29%), Query Frame = 0
Query:   62 RRKPYGYWNDLSNVQRELQQVAAQAALPARTMPRIAQLQRLGRGDLLAALAKHGGVRRVAALLRWSRPAAAGTAAAPPRGAVRSALRGRAPRPRSAWRDDDALAQEFRRVATQAGCAGCMPTRRVLLQMRRSDLVNAAAKRGGLGAFALTA-RLSARAPVRRSGYWRDFEHVASHLRAFSEQW-CGGRMPTAAELVERGMSSLSNAVAFHGGFDSVAARLRLAKRSGGRGAPKRWTRRKLVAEIELFVNTCMPRLAKER---VLPTEAQLRRFGRNDLSYAIAKFGGFEKVAALCGMK 354
            +RKP  YW++L+N++REL     +       MPR  +  + GR DL  A+ KHGG + VA  L                      L     RP   W +   + Q       + G  G MPT++ L      DL NA    G  G +A  A RL      R+ GY  D  +V   + AF E+    G MPT  EL + G  +L  AV  HGG   VA  L LA  +  RG+         + + E F    +  + K+    V+PT+ +L +  +  L+ AIA+ GGF  VA    +K
Sbjct:    4 QRKPNSYWDELTNLERELMAFINEHGTLG-LMPRAIEFVKAGRSDLANAMRKHGGFQSVAEKL---------------------GLTYARKRP-GYWDEFTNVKQNLFAFIEKNGVFGVMPTKQELQTAGYGDLANAI--EGEYGGYAAVAKRLGLTCAKRQRGYSDDINNVKHEILAFVEKHGTPGVMPTEGELKKAGQGALLGAVKKHGGTHKVAELLGLACVNRQRGS---------LNDFECFAGELLAFIEKQGTAGVMPTQKELAKAKKTSLASAIARHGGFPTVAERLKLK 267          
BLAST of Ggra7752.t1 vs. uniprot
Match: A0A2V3IQP9 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IQP9_9FLOR)

HSP 1 Score: 93.6 bits (231), Expect = 1.940e-17
Identity = 90/283 (31.80%), Postives = 124/283 (43.82%), Query Frame = 0
Query:   93 MPRIAQLQRLGRGDLLAALAKHGGVRRVAALLRWSRPAAAGTAAAPPRGAVRSALRGRAPRPRSAWRDDDALAQEFRRVA--TQAGCAG-CMPTRRVLLQMRRSDLVNAAAKRGGLGAFALTARLSARAPVRRSGYWRDFEHVASHLRAFSEQWCG------------GRMPTAAELVERGMSSLSNAVA-FHGGFDSVAARLRLAKRSGGRGAPKRWTRRKLVA--EIELFVNTCMPRLAKERVLPTEAQLRRFGRNDLSYAIAKFGGFEKVAALCGMKQRV 357
            MP    L+  GR D+  A+   GG R+VA++L WS           PR         ++ RP   W D   +  E  R    ++ G A   MPT + L   RRSDLV A  K GG+ A A    L      +   YW D+  V S +RAF E   G             RMP+  EL   G   L+  +  +HGGF +VA++L LA        PK+      V    +   V T    +  + V+P    LR   R+DL+ AI KFGG  KV+   G++ R+
Sbjct:    1 MPSAKYLRDSGRKDIDNAVTNLGGYRKVASMLGWS-----------PR---------KSKRPPGFWEDFSNVESELLRFIENSKLGLAPRFMPTLKQLRDCRRSDLVGAIEKNGGVAAVAEKLNLRRVVEHKPKKYWSDWMIVESEIRAFVENQEGERNGDSTRKGQVSRMPSLRELRAAGRGDLAEGIVKYHGGFRAVASKLNLA--------PKKKNDFFYVQFYNVAREVYTLTKDIGTDGVMPYSIVLRAAKRSDLAAAIVKFGGMSKVSQRLGLQYRM 255          
BLAST of Ggra7752.t1 vs. uniprot
Match: A0A8J6V391 (Uncharacterized protein n=1 Tax=Trichocoleus sp. FACHB-90 TaxID=2692876 RepID=A0A8J6V391_9CYAN)

HSP 1 Score: 88.6 bits (218), Expect = 2.450e-15
Identity = 76/231 (32.90%), Postives = 105/231 (45.45%), Query Frame = 0
Query:   63 RKPYGYWNDLSNVQRELQQVAAQAALPARTMPRIAQLQRLGRGDLLAALAKHGGVRRVAALLRWSRPAAAGTAAAPPRGAVRSALRGRAPRPRSAWRDDDALAQEFRRVATQAGCAGCMPTRRVLLQMRRSDLVNAAAKRGGLGAFALTARLSARAPVRRSGYWRDFEHVASHLRAFSEQW-CGGRMPTAAELVERGMSSLSNAVAFHGGFDSVAARLRLAKRSGGRGAPK 292
            RK  GYW D SNV+RE+     ++      MP   +L + GR  L + + KHGG + VA  L        G   A  R                 W D  ++ +E      + G  G MPT   L +  RSDL NA  K GG    A   RL      ++ GYW+DF +V   + AF +++   G MPT  EL++ G S+L+ A+  HGG  +VA  L L   S  R  P+
Sbjct:  209 RKLIGYWEDFSNVKREILAFIQESGTLG-VMPTHEELMKAGRTGLASVVQKHGGWQSVAERL--------GLTYAKKRSGY--------------WEDFLSVEREVFAFIEKFGTFGVMPTGDELREAGRSDLENAMRKHGGFSIVA--ERLGLTYAKKQHGYWKDFSNVEREVFAFIQEFGTVGVMPTNRELLQSGQSALAGAIQQHGGCLAVAHCLNLIYSSLERITPR 414          
BLAST of Ggra7752.t1 vs. uniprot
Match: Q64DH7 (Uncharacterized protein n=1 Tax=uncultured archaeon GZfos18C8 TaxID=285411 RepID=Q64DH7_9ARCH)

HSP 1 Score: 80.1 bits (196), Expect = 1.010e-12
Identity = 74/281 (26.33%), Postives = 123/281 (43.77%), Query Frame = 0
Query:   64 KPYGYWNDLSNVQRELQQVAAQAALPARTMPRIAQLQRLGRGDLLAALAK-HGGVRRVAALLRWSRPAAAGTAAAPPRGAVRSALRGRAPRPRSAWRDDDALAQEFRRVATQAGCAGCMPTRRVLLQMRRSDLVNAAAKRGGLGAFALTARLSARAPVRRSGYWRDFEHVASHLRAFSEQWCGGRMPTAAELVERGMSSLSNAVAFHGGFDSVAARLRLAKRSGGRGAPKRWTRRKLVAEIELFVNTCMPRLAKERVLPTEAQLRRFGRNDLSYAIAKFGG 343
            KP GYW +  N+++ELQ V  +        P   +L+ +GR DL +A+ K HGG+ ++   L  +                         +P + W+  + L  E +    +    G  PT+  L ++ R D+VNA  +  G G   +  ++      +  GY++ +E+    L+    +   G  PT  ELVE   SSLS+A+A+HGG+  V  ++            K W  + L  E+ L  +           LPT+  LR+ GR+D+  AI +  G
Sbjct:    3 KPAGYWRNWENLEKELQVVINELG----HFPTSGKLREIGRSDLDSAIYKYHGGINKIRKKLNLNLER----------------------KPPNYWKSWNNLENELK---VEINRLGYFPTQDDLRKISREDIVNAIHRHHG-GVSFVKEKMGYELSKKPMGYYKSWENTKKELQQLIVKL--GHFPTHLELVELKYSSLSSAIAYHGGYYEVRGKMGYEPIQKPLNYWKDW--KNLQEELHLICDELGE-------LPTQDDLRKVGRDDIVNAIHRHHG 242          
BLAST of Ggra7752.t1 vs. uniprot
Match: M2XJR4 (Uncharacterized protein n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2XJR4_GALSU)

HSP 1 Score: 62.4 bits (150), Expect = 5.370e-7
Identity = 67/232 (28.88%), Postives = 93/232 (40.09%), Query Frame = 0
Query:   63 RKPYGYWNDLSNVQRELQQVAAQAALPARTMPRIAQLQRLGRGDLLAALAKHGGVRRVAALLRWSRPAAAGTAAAPPRGAVRSALRGRAPRPRSAWRDDDA---LAQEFRRVATQAGCAGCMPTRRVLLQMRRSDLVNAAAKRGG---LGAFALTARLSARAPVRRSGYWRDFE-HVASHLRAFSEQWCGG-----RMPTAAELVERGMSSLSNAVAFHGGFDSVAARLRLA 282
            ++ YGYW D++N+ +EL+    Q     R +P   QL   GR D+  A+A+ GG R VA+ L                G   S            WR  +    L +E  +   Q  C G MP+ RV     R DL     + GG   LGA  L  +L       R   W  F    A     F++Q C       R+P+   ++  G   L + V  +GG   VA RL LA
Sbjct:  237 KRIYGYWTDMNNIAKELENFCKQNDFNQRIVPASQQLLAKGRSDIWYAIARKGGERLVASHL----------------GLHCS----------QDWRYFEEFLYLVKEIHQFCLQYNCIGMMPSYRVFRLAGRPDLATLILRHGGNIALGA-RLGLKLHQNTGKNRLLNWGPFSIEFAIECLEFTKQHCSVVEGMIRIPSKQCMLLNGREDLVDTVESYGGIVQVARRLGLA 441          
BLAST of Ggra7752.t1 vs. uniprot
Match: M2WYZ8 (Uncharacterized protein n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2WYZ8_GALSU)

HSP 1 Score: 61.6 bits (148), Expect = 1.070e-6
Identity = 79/303 (26.07%), Postives = 118/303 (38.94%), Query Frame = 0
Query:   63 RKPYGYWNDLSNVQRELQQVAAQAALPARTMPRIAQLQRLGRGDLLAALAKHGG---VRRVAALLRWSRPAAAGTAAAPPRGAVRSALRGRAPRPRSAWRDDDALAQEFRRVATQAGCAGC----------MPTRRVLLQMRRSDLVNAAAKRGGLGAFALTARLSARAPVRRSGYWRDFEHVASHLRAFSEQWC--GGRMPTAAELVERGMSSLSNAVAFHGGFDSVAARL--RLAKRSGGRGAPKRWTRRKLVAEIELFVNTCMPRLAKERVLPTEAQLRRFGRNDLSYAIAKFGGFEKVA 348
            RKPYGYW ++ N+ +E+Q+           MP    +    R DL AA+ K GG   + R+A L   S     G                          D D   +E      +  C             +PT   L + +RSDL  A    GG    +    +   +  +  G+W D  HV   L   + +       MPT ++L   G   L   +A HGG  +VA +L  ++  +            R+LV  +E   N+ +P     RV+PT+  LR  GR D+ +AI   GG  +VA
Sbjct:  118 RKPYGYWRNIENLLKEIQEFRKSRGEDISEMPCRNDILDSARLDLDAAILKRGGYEMISRIAKLKLSSYKERLG--------------------------DWDTFREEILSFIKEYVCKDREEMGVQEHMRLPTPIELRKYKRSDLFAAIEYHGGFWECSKRLGIPCVSLKKPCGFWSDTHHVEKELEIAARELNLPDKVMPTQSQLRSLGRLYLWRGIAQHGGAAAVAKQLGWKVILKPHKFWKNFEHLERELVEFVE---NSHLP-----RVMPTQKTLRAAGRYDIIHAIYIHGGSGEVA 386          
The following BLAST results are available for this feature:
BLAST of Ggra7752.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
DEAD/DEAH box helicase family protein n=6 Tax=unclassified Coleofasciculus TaxID=2692782 RepID=UPI001F55A29E9.900e-1830.54DEAD/DEAH box helicase family protein n=6 Tax=uncl... [more]
A0A2V3IQP91.940e-1731.80Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A8J6V3912.450e-1532.90Uncharacterized protein n=1 Tax=Trichocoleus sp. F... [more]
Q64DH71.010e-1226.33Uncharacterized protein n=1 Tax=uncultured archaeo... [more]
M2XJR45.370e-728.88Uncharacterized protein n=1 Tax=Galdieria sulphura... [more]
M2WYZ81.070e-626.07Uncharacterized protein n=1 Tax=Galdieria sulphura... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 34..65
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..67
NoneNo IPR availablePANTHERPTHR34060:SF2OS03G0837900 PROTEINcoord: 158..288
coord: 313..351
NoneNo IPR availablePANTHERPTHR34060:SF2OS03G0837900 PROTEINcoord: 62..125
NoneNo IPR availablePANTHERPTHR34060POLYKETIDE CYCLASE / DEHYDRASE AND LIPID TRANSPORT PROTEINcoord: 158..288
coord: 313..351
NoneNo IPR availablePANTHERPTHR34060POLYKETIDE CYCLASE / DEHYDRASE AND LIPID TRANSPORT PROTEINcoord: 62..125
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 12..23
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 24..375
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..23
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..11
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availableSUPERFAMILY101447Formin homology 2 domain (FH2 domain)coord: 51..61

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000088_piloncontigtig00000088_pilon:330147..331274 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra7752.t1Ggra7752.t1Gracilaria gracilis GNS1m malemRNAtig00000088_pilon 330147..331274 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra7752.t1 ID=Ggra7752.t1|Name=Ggra7752.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=376bp
MAFVTSLVAALPRPSARPRAAAAKRRRPAVASPHPVFSPLPAPTPAPAPQ
PPPPPPPPPPPRRKPYGYWNDLSNVQRELQQVAAQAALPARTMPRIAQLQ
RLGRGDLLAALAKHGGVRRVAALLRWSRPAAAGTAAAPPRGAVRSALRGR
APRPRSAWRDDDALAQEFRRVATQAGCAGCMPTRRVLLQMRRSDLVNAAA
KRGGLGAFALTARLSARAPVRRSGYWRDFEHVASHLRAFSEQWCGGRMPT
AAELVERGMSSLSNAVAFHGGFDSVAARLRLAKRSGGRGAPKRWTRRKLV
AEIELFVNTCMPRLAKERVLPTEAQLRRFGRNDLSYAIAKFGGFEKVAAL
CGMKQRVCGPFQRVHGQLVAMKSDS*
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