Ggra7748.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra7748.t1
Unique NameGgra7748.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length310
Homology
BLAST of Ggra7748.t1 vs. uniprot
Match: A0A2V3IWL8 (ER membrane protein complex subunit 2 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IWL8_9FLOR)

HSP 1 Score: 335 bits (859), Expect = 6.130e-112
Identity = 175/305 (57.38%), Postives = 223/305 (73.11%), Query Frame = 0
Query:    1 MASASVVALLPRASHSVA-AATQLLSVIADRSLYLPHLVLQHGELALTAHRQKSRPYWDVIEQLFIAACQLRENASASSLLARILERFPHSARSRILKALHLEAKHDWVGAGEEYIHVIAEHPREQNAYKRQIALFKSQRKLPEAAALLHHYLDLFTTDFDGWAELCSIALQLGRFAHAIFAANELLVIDPDNHAAHVLVADVYVTLGGVQHLCLARKHYAASLALRPAPNLRALYGLWLVCAMLIDGELLDDDAERNTTLRLLNIARKGITAVYANSSTLSGGVYVATTLGSSVYTAKKRITRD 304
            MA+A++ A L  A+ S    A   LS+I+D  LY P  VL+  + AL AHR  +RP+WD  EQ+ +AA  + ++ +A+  + RIL+RFP+S+R+R+L+A+  E++  WV A   YI +    P  + AYKRQ+AL KSQ KL EAA LLH YL+ F TDFD WAELC++ LQLGRFAHAIFAANELL++DP NHAAH +VADVY TLGGV +LCLARKHYAASL++R A NLRALYGLWLVCA L+DG LL DD +   TLRL  +ARKGITAVY N +  SG V+VA TLG SVYT +KR+ ++
Sbjct:    1 MAAAALDAQLAAANSSAPPVAATALSLISDARLYRPRTVLRLADTALRAHRPSTRPFWDAAEQVALAAYHVFDSRTAAQFVRRILDRFPNSSRARLLQAISHESQLKWVDAARAYIRITDADPLFKPAYKRQVALLKSQFKLSEAATLLHDYLNKFATDFDAWAELCALDLQLGRFAHAIFAANELLLLDPHNHAAHTVVADVYATLGGVHNLCLARKHYAASLSMRAASNLRALYGLWLVCATLLDGRLLKDDRDLQVTLRLFRVARKGITAVYRNPTAQSGAVFVANTLGMSVYTGEKRVLKE 305          
BLAST of Ggra7748.t1 vs. uniprot
Match: A0A0N7L4P2 (ER membrane protein complex subunit 2 n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0N7L4P2_PLAHL)

HSP 1 Score: 134 bits (336), Expect = 1.590e-33
Identity = 83/233 (35.62%), Postives = 125/233 (53.65%), Query Frame = 0
Query:   14 SHSVAAATQLLSVIADRSLYLPHLVLQHGELALTAH-RQKSRPYWDVIEQLFIAACQLRENASASSLLARILERFPHSARSRILKALHLEAKHDWVGAGEEYIHVIAEHPREQNAYKRQIALFKSQRKLPEAAALLHHYLDLFTTDFDGWAELCSIALQLGRFAHAIFAANELLVIDPDNHAAHVLVADVYVTLGGVQHLCLARKHYAASLALRPAPNLRALYGLWLVCAMLI 245
            S+S A    LL  I    L  P +V   G+L +  H R      W+V EQ FIAA  L ++  A++ L  +  +FP S+R   L+ + LE + ++  A   Y  ++  +P      KR+IA++K+Q+K  +    L+ +L  F TD   W EL    L LG + +A F   EL++++P +  AH  +AD+Y T+GG+++L  ARKHYA S+ L    NLRA   L LVC   I
Sbjct:   14 SNSRAEYLDLLYYIRKEKLRKPQVVASIGKLLVAEHHRGLGDELWNVYEQTFIAALDLHDDELATTCLQALQTKFPGSSRVARLEGMQLEQRGEFAKALALYAELLEANPANALVLKRKIAIYKAQKKTTDVIMALNEFLRSFGTDLAAWTELGETYLSLGAYRYAAFCYEELVLLNPMDAIAHSRLADIYSTIGGLEYLLTARKHYAHSIELNKKQNLRAFLAL-LVCTKAI 245          
BLAST of Ggra7748.t1 vs. uniprot
Match: A0A3M6V6N0 (ER membrane protein complex subunit 2 n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6V6N0_9STRA)

HSP 1 Score: 131 bits (330), Expect = 1.570e-32
Identity = 87/258 (33.72%), Postives = 130/258 (50.39%), Query Frame = 0
Query:   22 QLLSVIADRSLYLPHLVLQHGELALTAHRQK-SRPYWDVIEQLFIAACQLRENASASSLLARILERFPHSARSRILKALHLEAKHDWVGAGEEYIHVIAEHPREQNAYKRQIALFKSQRKLPEAAALLHHYLDLFTTDFDGWAELCSIALQLGRFAHAIFAANELLVIDPDNHAAHVLVADVYVTLGGVQHLCLARKHYAASLALRPAPNLRALYGLWLVCAMLID---GELLDDDAERNTTLRLLNIARKGITAVYA 275
            +LL  +    L  PH V   G+L +T H        W V EQ FIAA  L ++  + + L  +  +FP S+R   L+ + LE + ++  A   Y  ++  +P     +KR+IA+ K+QRK  +    L+ +L  F TD   W EL    L +G + +A F   EL++++P +  +H  +AD+Y T+GG+ +L  ARKHYA SL L    NLRA + L + C   I    G   D D +     RL N A   I   YA
Sbjct:   24 ELLHYVRKEKLREPHAVASIGKLLVTKHSWGLGDELWTVYEQTFIAALDLHDDELSETCLKALQTKFPGSSRVARLEGMQLEQRREFTKALALYDELLEANPANALVFKRKIAVLKAQRKTADVVTALNEFLRSFGTDQTAWTELGETYLSIGTYRYAAFCYEELVLLNPMDAISHSRLADIYATIGGLDNLLKARKHYAHSLELNKKQNLRACFAL-VACTKAIATQRGYRADQDDD-GINGRLQNFALDHIQDFYA 279          
BLAST of Ggra7748.t1 vs. uniprot
Match: M4BV78 (ER membrane protein complex subunit 2 n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BV78_HYAAE)

HSP 1 Score: 130 bits (327), Expect = 3.590e-32
Identity = 83/258 (32.17%), Postives = 134/258 (51.94%), Query Frame = 0
Query:   21 TQLLSVIADRSLYLPHLVLQHGELALTAHRQK-SRPYWDVIEQLFIAACQLRENASASSLLARILERFPHSARSRILKALHLEAKHDWVGAGEEYIHVIAEHPREQNAYKRQIALFKSQRKLPEAAALLHHYLDLFTTDFDGWAELCSIALQLGRFAHAIFAANELLVIDPDNHAAHVLVADVYVTLGGVQHLCLARKHYAASLALRPAPNLRALYGLWLVC--AMLIDGELLDDDAERNTTLRLLNIARKGITAVYA 275
            T+LL  +    L     V + G+L +T HR+      W V EQ FIAA  + ++  + + L  +  +FP S+R   L+ + LE ++++  A   Y  ++  +P     +KR+IA+ K+Q+K  +  A L+ +L  F TD   W EL    L +G + +A F   EL++++P +   H  +AD+Y T+GG+ +L  ARKHYA SL L    NLRA + L ++C  A+ +      D  +     RL   A   I  +YA
Sbjct:   23 TELLRYVRKEKLRESRAVSRTGKLLVTKHRRGLGDEVWTVYEQTFIAALDVHDDELSETCLKALQGQFPGSSRVARLEGMQLEQRNEFTKALTLYDQLLGANPANALVFKRKIAVLKAQKKTMDVIAALNEFLRCFGTDQTAWTELGETYLSIGTYRYAAFCYEELVLLNPMDAIYHSRLADIYSTIGGLDNLLKARKHYAHSLELNKKQNLRAYFAL-VICTKAIAMQRGFRADQDDDGINERLQTFALNSIQDIYA 279          
BLAST of Ggra7748.t1 vs. uniprot
Match: H3HDU6 (ER membrane protein complex subunit 2 n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3HDU6_PHYRM)

HSP 1 Score: 129 bits (325), Expect = 6.730e-32
Identity = 83/257 (32.30%), Postives = 130/257 (50.58%), Query Frame = 0
Query:   22 QLLSVIADRSLYLPHLVLQHGELALTAHRQK-SRPYWDVIEQLFIAACQLRENASASSLLARILERFPHSARSRILKALHLEAKHDWVGAGEEYIHVIAEHPREQNAYKRQIALFKSQRKLPEAAALLHHYLDLFTTDFDGWAELCSIALQLGRFAHAIFAANELLVIDPDNHAAHVLVADVYVTLGGVQHLCLARKHYAASLALRPAPNLRALYGLWLVC--AMLIDGELLDDDAERNTTLRLLNIARKGITAVYA 275
            +LL  +    L  P  V + G+L +T H        W V EQ  +AA  L ++  A + L  +  +FP S+R   L+ + LE + ++V A   Y  ++  +P      KR+IA+ K+Q+K  +  A L+  L  F +D   W EL    L +G + +A F   E+++++P +  +H  +AD+Y T+GG+ +L  ARKHYA S+ L    NLRA +GL L C  A+ +      D  +     RL   A   I  VYA
Sbjct:   24 ELLQYVRREKLREPRAVARVGQLLVTKHSWGLGDELWSVYEQTLVAALDLHDDELADTCLTALQRKFPGSSRVARLEGMRLEQRGEFVKALALYDELLESNPANMLVLKRKIAVLKAQKKTADVVAALNELLRSFGSDLAAWTELGETYLSMGAYRYAAFCYEEMVLLNPMDAISHSRLADIYSTVGGLDNLLTARKHYAHSIELNKKQNLRAYFGL-LTCTKAITVQRGYRADQDDDGINERLQKFALDNILDVYA 279          
BLAST of Ggra7748.t1 vs. uniprot
Match: W2QL82 (ER membrane protein complex subunit 2 n=9 Tax=Phytophthora TaxID=4783 RepID=W2QL82_PHYPN)

HSP 1 Score: 125 bits (315), Expect = 1.920e-30
Identity = 75/228 (32.89%), Postives = 118/228 (51.75%), Query Frame = 0
Query:   22 QLLSVIADRSLYLPHLVLQHGELALTAHRQK-SRPYWDVIEQLFIAACQLRENASASSLLARILERFPHSARSRILKALHLEAKHDWVGAGEEYIHVIAEHPREQNAYKRQIALFKSQRKLPEAAALLHHYLDLFTTDFDGWAELCSIALQLGRFAHAIFAANELLVIDPDNHAAHVLVADVYVTLGGVQHLCLARKHYAASLALRPAPNLRALYGLWLVCAMLIDGE 248
            +LL  +    L  P  V   G+L +T H        W V EQ F+AA  L ++  A + L  +  +FP S+R   L+ + LE + ++  A   Y  ++  +P      KR+IA+ K+Q+K  E    L+ +L  F TD   W EL    L +G + +A F   EL++++P +  +H  +AD+Y T+GG+ +L  ARKHYA S+ L    NLRA + L + C   I  +
Sbjct:   24 ELLHYVRKEKLREPRAVASIGKLLVTKHSWGLGDELWGVYEQTFVAALDLHDDELAETCLKALQTKFPGSSRVARLEGMQLEQRGEFAKALVLYAELLEANPANALVLKRKIAVLKAQKKTAEVVTALNEFLKSFGTDQAAWTELGETYLSMGAYRYAAFCYEELVLLNPMDAISHSRLADIYSTIGGLDNLLTARKHYAHSIELNKKQNLRAYFSL-VTCTKAIAAQ 250          
BLAST of Ggra7748.t1 vs. uniprot
Match: K3WPG1 (ER membrane protein complex subunit 2 n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WPG1_GLOUD)

HSP 1 Score: 125 bits (313), Expect = 3.440e-30
Identity = 76/233 (32.62%), Postives = 122/233 (52.36%), Query Frame = 0
Query:   14 SHSVAAATQLLSVIADRSLYLPHLVLQHGELALTAHRQK-SRPYWDVIEQLFIAACQLRENASASSLLARILERFPHSARSRILKALHLEAKHDWVGAGEEYIHVIAEHPREQNAYKRQIALFKSQRKLPEAAALLHHYLDLFTTDFDGWAELCSIALQLGRFAHAIFAANELLVIDPDNHAAHVLVADVYVTLGGVQHLCLARKHYAASLALRPAPNLRALYGLWLVCAMLI 245
            + S  A  +LL  +    L +P +V + G L +  +  +     W V EQ+F+AA  L ++  A  L A+    FP S+R   L+ + LE + ++  A E Y  V+  +P      KR+IA+ K+Q+K  +    L+ YL  F TD   W EL    L +G + +  F   EL++++P +   H  +AD+Y ++GG+ +LC+ARKHY+ SL +    N+R   GL L C   I
Sbjct:   16 TRSYDACAELLQYVRKEKLRVPRVVAKFGSLLIQNYSWRLGSDIWAVYEQVFVAALDLHDDELAGPLKAQ----FPKSSRVARLEGMQLEQRGEYAKAEEIYDEVLKGNPANALMSKRKIAILKAQKKTQDMIVALNDYLRNFQTDQAAWLELAETYLSIGAYRYGAFCYEELILLNPMDAIFHSRLADIYSSIGGLDNLCVARKHYSHSLEINKHKNVRGYIGL-LACTKAI 243          
BLAST of Ggra7748.t1 vs. uniprot
Match: A0A484E9D9 (ER membrane protein complex subunit 2 n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484E9D9_BRELC)

HSP 1 Score: 124 bits (312), Expect = 8.150e-30
Identity = 72/216 (33.33%), Postives = 114/216 (52.78%), Query Frame = 0
Query:   23 LLSVIADRSLYLPHLVLQHGELALTAHRQK-SRPYWDVIEQLFIAACQLRENASASSLLARILERFPHSARSRILKALHLEAKHDWVGAGEEYIHVIAEHPREQNAYKRQIALFKSQRKLPEAAALLHHYLDLFTTDFDGWAELCSIALQLGRFAHAIFAANELLVIDPDNHAAHVLVADVYVTLGGVQHLCLARKHYAASLALRPAPNLRALYGL 237
            LL  I    L +PH+V   G+  +T H        W + E  F+AA  L +N  A + L  +  +FP S+R   L+ + LE + ++  A   Y  ++  +P      KR+IA+ K+Q+K  +    L+ +L  F TD   W EL    L LG + +A +   EL++++P +   H  +AD+Y T+GG+ +L +ARKHYA S+ L    NLRA + L
Sbjct:   23 LLHYIRKEKLRVPHVVASMGKKLVTEHSWGLGDELWSLYEHTFVAALDLHDNDLAETCLQALKNKFPGSSRVSRLEGMRLEQRGEFSQALMLYDELLEANPANALVLKRKIAILKAQKKSTDVVVALNDFLRSFGTDQAAWTELGETYLSLGTYRYAAYCYEELVLLNPMDAITHSRLADIYSTIGGLDNLLIARKHYAHSIELNKKKNLRAYFAL 238          
BLAST of Ggra7748.t1 vs. uniprot
Match: A0A0D2X4G1 (ER membrane protein complex subunit 2 n=1 Tax=Capsaspora owczarzaki (strain ATCC 30864) TaxID=595528 RepID=A0A0D2X4G1_CAPO3)

HSP 1 Score: 123 bits (309), Expect = 1.590e-29
Identity = 72/234 (30.77%), Postives = 121/234 (51.71%), Query Frame = 0
Query:   42 GELALTAHRQKSRPYWDVIEQLFIAACQL--------RENASASSLLARILERFPHSARSRILKALHLEAKHDWVGAGEEYIHVIAEHPREQNAYKRQIALFKSQRKLPEAAALLHHYLDLFTTDFDGWAELCSIALQLGRFAHAIFAANELLVIDPDNHAAHVLVADVYVTLGGVQHLCLARKHYAASLALRPAPNLRALYGLWLVCAMLIDGELLDDDAERNTTLRLLNIAR 267
            G  +L A        WDV+EQ+  AA            E + A++L+ ++  RFP S R ++L+    EA+ DW GA + Y  ++ E P    A KR+  +FKS+  +P+A ++L  Y+     D++ W EL  + L  G F  A F   EL++ +P +   H+  A+   T+G +++L LARKHYA +  ++P  + R+L GL++ C+ L   + +      N  L    ++R
Sbjct:   40 GARSLAAAFSDEAERWDVLEQVARAAMDCGRARPTRGEEESLAATLVKQLAARFPESNRVKLLQGELFEAQGDWAGATQLYDELLTETPNHAAATKRKAVIFKSRGDIPKAISVLAAYVQQAMADYEAWVELSELYLSRGDFQRAAFCFEELILSNPLSPVYHIRYAETLYTMGSLENLQLARKHYANACKIQP-DDARSLLGLYMTCSALNSEKFIKQRTPINEELEAFAVSR 272          
BLAST of Ggra7748.t1 vs. uniprot
Match: A0A6P8IIZ3 (ER membrane protein complex subunit 2 n=1 Tax=Actinia tenebrosa TaxID=6105 RepID=A0A6P8IIZ3_ACTTE)

HSP 1 Score: 121 bits (304), Expect = 7.600e-29
Identity = 74/212 (34.91%), Postives = 112/212 (52.83%), Query Frame = 0
Query:   29 DRSLYLPHLVLQHGELALTAHRQK-SRPYWDVIEQLFIAACQLRENASASSLLARILERFPHSARSRILKALHLEAKHDWVGAGEEYIHVIAEHPREQNAYKRQIALFKSQRKLPEAAALLHHYLDLFTTDFDGWAELCSIALQLGRFAHAIFAANELLVIDPDNHAAHVLVADVYVTLGGVQHLCLARKHYAASLALRPAPNLRALYGLWL 239
            D  L     V++ GE  L  H  K     W + EQ+F+A+    +   A+  L  +  +FP S R + LK + LEA   +  A + Y  ++   P    AYKR+IA+ KSQ K+PEA   L+ YL  F +D + W EL  + + L     A F   EL++ +P NH  H   A++  T+G ++++  +RK++A SL L    NLRALYG +L
Sbjct:   20 DEPLRNSEEVVEFGECLLLEHGNKLGDELWTIYEQVFLASLDCGKLDLATMCLKELNTQFPGSMRVKKLKGMRLEALERYEDAEKIYDKILEAEPANSVAYKRKIAILKSQNKIPEAIKELNEYLKKFMSDQEAWMELIDLYISLQDLRKAKFCMEELILANPHNHLYHQRFAEILYTIGDLENMEKSRKYFAQSLKL-DNDNLRALYGFFL 230          
The following BLAST results are available for this feature:
BLAST of Ggra7748.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IWL86.130e-11257.38ER membrane protein complex subunit 2 n=1 Tax=Grac... [more]
A0A0N7L4P21.590e-3335.62ER membrane protein complex subunit 2 n=1 Tax=Plas... [more]
A0A3M6V6N01.570e-3233.72ER membrane protein complex subunit 2 n=1 Tax=Pero... [more]
M4BV783.590e-3232.17ER membrane protein complex subunit 2 n=1 Tax=Hyal... [more]
H3HDU66.730e-3232.30ER membrane protein complex subunit 2 n=1 Tax=Phyt... [more]
W2QL821.920e-3032.89ER membrane protein complex subunit 2 n=9 Tax=Phyt... [more]
K3WPG13.440e-3032.62ER membrane protein complex subunit 2 n=1 Tax=Glob... [more]
A0A484E9D98.150e-3033.33ER membrane protein complex subunit 2 n=1 Tax=Brem... [more]
A0A0D2X4G11.590e-2930.77ER membrane protein complex subunit 2 n=1 Tax=Caps... [more]
A0A6P8IIZ37.600e-2934.91ER membrane protein complex subunit 2 n=1 Tax=Acti... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 18..261
e-value: 2.8E-16
score: 61.4
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 83..227
IPR039856ER membrane protein complex subunit 2-likePANTHERPTHR12760TETRATRICOPEPTIDE REPEAT PROTEINcoord: 19..275
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 11..19
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 2..10
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 20..309
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..1
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..19

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000088_piloncontigtig00000088_pilon:325107..326036 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra7748.t1Ggra7748.t1Gracilaria gracilis GNS1m malemRNAtig00000088_pilon 325107..326036 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra7748.t1 ID=Ggra7748.t1|Name=Ggra7748.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=310bp
MASASVVALLPRASHSVAAATQLLSVIADRSLYLPHLVLQHGELALTAHR
QKSRPYWDVIEQLFIAACQLRENASASSLLARILERFPHSARSRILKALH
LEAKHDWVGAGEEYIHVIAEHPREQNAYKRQIALFKSQRKLPEAAALLHH
YLDLFTTDFDGWAELCSIALQLGRFAHAIFAANELLVIDPDNHAAHVLVA
DVYVTLGGVQHLCLARKHYAASLALRPAPNLRALYGLWLVCAMLIDGELL
DDDAERNTTLRLLNIARKGITAVYANSSTLSGGVYVATTLGSSVYTAKKR
ITRDWPRSR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf
IPR039856EMC2-like