Ggra7732.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra7732.t1
Unique NameGgra7732.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length866
Homology
BLAST of Ggra7732.t1 vs. uniprot
Match: R7Q4X8 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q4X8_CHOCR)

HSP 1 Score: 162 bits (409), Expect = 2.330e-37
Identity = 200/561 (35.65%), Postives = 280/561 (49.91%), Query Frame = 0
Query:  316 HPSQQHASATESPFNFQTPANDPTLSQHAYVTDAQRSYLN--DLPHREQHQYSRYHS--SRIRQPPEQ--------TDASTAINAITQSIPPTANGAHTS--LPISSTAST---LPTAT-ARMPSPLNRENSANRYAHTQPSTQTLTPPLQSHGTSVARDGTHDNSQVHNPSETAEERKRRLAREXXXXXXXXLKLDPQVHPNKPHVDTSSRGEES---LREGAAASQNAPMDINMHVRPAADNPIQMPSSALQPALHTTFEPPNLSTNNHTTS-LQPLQVAPVTATQEDIQVPATTGRNAYNSHSLTVGTSPNASNGLSSSHRAAADLARMSGASDERLIMRAGDPDEDPEARKRRLAREXXXXXXXXLKE--KRIVEADKAQGQQSQALKY--EPTQARMVDNVESTRTHSELDRRTIPTDPITDPVRIPLTTPPANVFGPRSDVAGNMPFEQQNRLVRNAGSSGVPESTVPPMTLSFN-GNNGINLGAMPVSNV---MGSQNLVHWTHGFESESAARFAVEAAVGAFRSHLGGNNPSAKMYILQQGIIMLSA-EEGGR 845
            H  QQ  S +   F+ +T   +P  S   +V DAQR Y    ++P R     + Y    S+I+Q  EQ         DA+ A   +T ++P   N  HT+   P+ ST +    LP A  AR P+ +    +AN   HTQP         Q H           +S   NP+E+AE+RKRRLAR+XXXXXXXXLK + +    K   D+S R  +    L  G      + + +  H   A     Q+  S +  A H  FEP +L  N    S LQ L V  V   QED+   A+  R  +++H+L VG      +G   S     ++ R+ G   E  +     P E  E RKRRLAR+        LKE  K+ +E D      SQ LK   + T  R+V+N E  R   ELDRR +  D   D  RIPL  P + VFG R DV  ++ F  Q R +R  G+S + + T     L+F  GN+ +NL  MPV N+   + S  L+ W+ GF+SE++ARFAV++AV AFRSHL   +P+ + Y+LQQG+++LS+ EE GR
Sbjct:  320 HGEQQAFSFSSQGFSTRTANVNPVASPTRFVADAQRQYFQQQNVPLRS----TAYQGLGSQIQQRSEQRASVLDDPADAAAAAAGLT-ALPDAVNRMHTAEASPVKSTPAGVLGLPNAQGARYPAAIGANTTAN-LQHTQPGQLPAQSQQQQHQGQAPHASVAGDSLSRNPNESAEDRKRRLARDXXXXXXXXLKGERE---GKTEADSSPRSSDPNSRLLAGGGTIPASSVGMGGHAMQAHGQG-QIQGSGV--AAH--FEPGSLGPNAGMQSGLQQLHVPGVAGGQEDLVNGAS--RGGFSAHTLGVG----GVSGSLGSGAVVGNVDRIGGNDGE--VKEVPVPFETAEDRKRRLARDRQRKRRSRLKEQKKKTIEPDGKSPTSSQTLKNARDNTGGRLVENAEQ-RLPPELDRRAMGQDGTGDAARIPLGAPGSAVFGGRPDVGQSLGFGDQGRGLR--GNSSMADGT----GLNFGTGNHALNL-QMPVGNIGSGVHSHPLMDWSQGFDSENSARFAVDSAVLAFRSHLSNLSPNGRTYVLQQGLMILSSSEEAGR 850          
The following BLAST results are available for this feature:
BLAST of Ggra7732.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
R7Q4X82.330e-3735.65Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 25..45
NoneNo IPR availableCOILSCoilCoilcoord: 469..489
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 266..291
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 634..650
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 137..158
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 480..494
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 601..616
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 369..466
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..525
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 354..368
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 41..110
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 495..512
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 180..209
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 318..349
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 601..679

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000088_piloncontigtig00000088_pilon:177965..180562 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra7732.t1Ggra7732.t1Gracilaria gracilis GNS1m malemRNAtig00000088_pilon 177965..180562 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra7732.t1 ID=Ggra7732.t1|Name=Ggra7732.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=866bp
MKESGPAALPVPAESPEERKRRLARERQRRHREKLRANKQRASDSTNAAA
SSTPPSNSDHIHHPYRSNSISRPSPHSSSVQNHRSSDPPTTSAQHAPASL
HSTPPRHASTPLPRHNSLHAHTPVADPPKPLVDTTNAAVSRIDTSVLPSN
QSSPPSAYAAKHAHSLSTHDHRTASHIPHHKLQLQYTPTQPLHQSLQPPH
QTRHQPSHVASSAPRPAGNHLLHQPSHHHLTQQQPNPHARRMHHIPHHQT
VPSHPHTPKPTPAAPTSLSQPTQQQSSLKHPHHSQLQRPYSANVHLHPPQ
FTHVSHAFPAHALHPHPSQQHASATESPFNFQTPANDPTLSQHAYVTDAQ
RSYLNDLPHREQHQYSRYHSSRIRQPPEQTDASTAINAITQSIPPTANGA
HTSLPISSTASTLPTATARMPSPLNRENSANRYAHTQPSTQTLTPPLQSH
GTSVARDGTHDNSQVHNPSETAEERKRRLARERQRRRRKRLKLDPQVHPN
KPHVDTSSRGEESLREGAAASQNAPMDINMHVRPAADNPIQMPSSALQPA
LHTTFEPPNLSTNNHTTSLQPLQVAPVTATQEDIQVPATTGRNAYNSHSL
TVGTSPNASNGLSSSHRAAADLARMSGASDERLIMRAGDPDEDPEARKRR
LARERQRRRRQRLKEKRIVEADKAQGQQSQALKYEPTQARMVDNVESTRT
HSELDRRTIPTDPITDPVRIPLTTPPANVFGPRSDVAGNMPFEQQNRLVR
NAGSSGVPESTVPPMTLSFNGNNGINLGAMPVSNVMGSQNLVHWTHGFES
ESAARFAVEAAVGAFRSHLGGNNPSAKMYILQQGIIMLSAEEGGREVING
QILASLRTDGVMRIG*
back to top