Ggra7701.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra7701.t1
Unique NameGgra7701.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length142
Homology
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BLAST of Ggra7701.t1 vs. uniprot
Match: A0A2V3IVJ5 (Clathrin heavy chain n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IVJ5_9FLOR)

HSP 1 Score: 151 bits (382), Expect = 8.490e-40
Identity = 83/106 (78.30%), Postives = 94/106 (88.68%), Query Frame = 0 
Query:    1 MPFMIQTLAEAGSRLTGLEEERKTKREVEEMRRTEEKEDLVDESVLLYGLQDYQQQPLLSYYQADGGLVDGSALGGG-GGNGVGLIGWHGGNTAMKQGASNALTVV 105
            MPF+IQTLAEAGSRLTGLEEERKTKRE+E+M+R EE+ED VDESVLLYGLQ+YQQQPLL+Y+QADGG+V GSALGGG GG G+GLIGWHGGN      A+NALT V
Sbjct: 1697 MPFLIQTLAEAGSRLTGLEEERKTKREIEQMKRDEEEEDFVDESVLLYGLQEYQQQPLLTYHQADGGVVGGSALGGGAGGQGIGLIGWHGGN---HTPAANALTTV 1799
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BLAST of Ggra7701.t1 vs. uniprot
Match: R7QJX3 (Clathrin heavy chain n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QJX3_CHOCR)

HSP 1 Score: 119 bits (298), Expect = 1.740e-28
Identity = 76/121 (62.81%), Postives = 86/121 (71.07%), Query Frame = 0 
Query:    1 MPFMIQTLAEAGSRLTGLEEERKTKREVEEMRRTEEKEDLVDESVLLYGLQDYQQQPLLSYYQADGGLVDGSALGG-GGGNGVGLIGWHGGNTAMKQGASNALTVVGPMTSVHTANAFNPM 120
            MPF+IQTLAEAGSRLTGLEEERKTKRE+EE++R EE+EDL D S+LLYGLQ  QQQ +L+Y QADGG+V GSAL G GGG  V LIGW G       GA      V PM +  T    NPM
Sbjct: 1638 MPFLIQTLAEAGSRLTGLEEERKTKREIEEIKRAEEEEDLDDPSILLYGLQPEQQQLMLTYQQADGGVVGGSALAGYGGGGNVPLIGWGG------PGAGQ----VDPMAAYTTYGIGNPM 1748
The following BLAST results are available for this feature:
BLAST of Ggra7701.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3IVJ58.490e-4078.30Clathrin heavy chain n=1 Tax=Gracilariopsis chorda... [more]
R7QJX31.740e-2862.81Clathrin heavy chain n=1 Tax=Chondrus crispus TaxI... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 18..38

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000088_piloncontigtig00000088_pilon:96848..97273 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra7701.t1Ggra7701.t1Gracilaria gracilis GNS1m malemRNAtig00000088_pilon 96848..97273 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra7701.t1 ID=Ggra7701.t1|Name=Ggra7701.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=142bp
MPFMIQTLAEAGSRLTGLEEERKTKREVEEMRRTEEKEDLVDESVLLYGL
QDYQQQPLLSYYQADGGLVDGSALGGGGGNGVGLIGWHGGNTAMKQGASN
ALTVVGPMTSVHTANAFNPMNAYSTYASPTGRAAYATGQAM*
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