Ggra7696.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra7696.t1
Unique NameGgra7696.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length504
Homology
BLAST of Ggra7696.t1 vs. uniprot
Match: A0A2V3IY80 (Transcription initiation factor TFIID subunit 6 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IY80_9FLOR)

HSP 1 Score: 647 bits (1670), Expect = 2.390e-228
Identity = 333/501 (66.47%), Postives = 391/501 (78.04%), Query Frame = 0
Query:    4 KRAKPSNANVLPHETLRVDTEVIRVIGQSIPSMPPFADSAAGTLAHDIEYRIREIVQDAMKFMKHSKRNKLNTNDINAALRLRNVAPILGFSDPKGNSHKVKDNGAT--GNEREYLKSPIARVKGYLRPQFTAVDGNEDLFFVPDKEMTVKSVIETNMPLVPLDVNLSTHWLAVSGKQPSIPQNPTRKRKASYGEDEDMEPVTKKRKLPTEVKPLVKHELSRELQLYLEQITTAVQGDDTKHLEQCLYAVAHEKGIAELLPYFTQFVFKCVTKCDNLPLRFSCMRLVNAILDNDVFDLRLYLQQVLPAVLTCMLGKRFSGNPRDNHWALRDYTTTVMKKICDRYGHQYPDIQTRITKTCALALDNTKRPLTTHYGAIVGLAALGQRVLERYLLPRLERKTYLSTLEKIVKNSNTKPVRREEACRVFGALFWAVSLARNPLNVSARP-SEVDVQLKHFLDYLPSAEAIFKAGEVELGER-FYPHRHGKTETQLTAALLEERK 500
            +++ PS A+    E  R+D E IRVI Q+IPSM P  D +A  LA DIEYRIRE VQDA+KFMKHSKRN LNT DINAALR+RN  PI+GF  P+GNSHK      T  G ++ Y ++   RV G  +  F AV+G EDL+FVPDK+ TV S+IETN+PLVPLDV+L+ HWL + GKQP+IPQNP R R  S GE  D EPV KK+K   EVKPLVKHELSRELQLYLEQITTAVQGDDTKHLEQCLYAVA+EKGIAELLPYFTQF++KCVTK  +L L FSC+RLVNA+LDNDVFDLRLYL QVLPAVLTCML KRFSGNPR+NHWA+RDY + V+KKIC RYG+QYPDIQ RITKTCA ALDN KRP+TTHYGAIVGLAALG RV+ER+LLPRLE+K Y+ TLE+++ N  TK +R+EEA RVFGAL WAVSLAR+    S    S V VQ+ H L YLPSA A+F+ G+  LGE+  +PH  G T+ +LT+ LL+  K
Sbjct:   39 EKSPPSRASKSV-EPNRIDMESIRVIAQTIPSMLPLTDPSASLLALDIEYRIREAVQDALKFMKHSKRNILNTVDINAALRMRNAPPIVGFGKPRGNSHKATTGSGTPAGKQKGYAEA--GRVDGSTQAFFKAVEGIEDLYFVPDKQKTVTSIIETNIPLVPLDVSLTRHWLTIDGKQPTIPQNPKRSRPVSMGESADAEPVAKKQKTACEVKPLVKHELSRELQLYLEQITTAVQGDDTKHLEQCLYAVANEKGIAELLPYFTQFLYKCVTKGGSLALMFSCLRLVNAMLDNDVFDLRLYLHQVLPAVLTCMLAKRFSGNPRENHWAIRDYASKVVKKICQRYGNQYPDIQPRITKTCASALDNPKRPMTTHYGAIVGLAALGHRVVERHLLPRLEKKAYMRTLERLITNHATKSIRKEEASRVFGALVWAVSLARDSQAQSPEDLSNVQVQVNHALSYLPSAVAVFQVGQKVLGEKPLFPHSDGMTDAELTSDLLKASK 536          
BLAST of Ggra7696.t1 vs. uniprot
Match: R7QB25 (TAF domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QB25_CHOCR)

HSP 1 Score: 358 bits (920), Expect = 6.720e-115
Identity = 216/521 (41.46%), Postives = 306/521 (58.73%), Query Frame = 0
Query:   15 PHETLRVDTEVIRVIGQSIPSMPPFADSAAGTLAHDIEYRIREIVQDAMKFMKHSKRNKLNTNDINAALRLRNVAPILGFSDPKGNSHKVKDNGA---TGNEREYLKSPIARVKGYLRP-QFTAVDGNEDLFFVPDKEMTVKSVIETNMPLVPLDVNLSTHWLAVSGKQPSIPQNP---TRKRKASYGEDEDMEPVTKKRKLPTEVKPLVKHELSRELQLYLEQITTAVQGDDTKHLEQCLYAVAHEKGIAELLPYFTQFVFKCVTKC-DNLPLRFSCMRLVNAILDNDVF-DLRLYLQQVLPAVLTCMLGKRFSGNPRDNHWALRDYTTTVMKKICDR-YGHQYPDIQTRITKTCALALDNTKRPLTTHYGAIVGLAALGQRVLERYLLPRLERKTYLSTLEKIVKNSNTKPVRREEACRVFGALFWAVSLARNPLNVSARPSEVD----------------------VQLKHFLDYLPSAEAIFKAGEVELGERFYPHRHGKTETQLTAALLEERKAKT 503
            P E  R+  E + VI QS+ ++PP +D AA TLA D EYR+R+IVQ+ +KFMKHSK+N L  + ++ ALR+ NV P+ GF    G   +  ++GA    G     L  P A   G  R  QF  VDG  +LFFV D E++VKS+++   P +PL+V ++ HWLAV GKQP+I QNP   T++ +   G+ E     T       EV+  +KH+L+RELQLY + +  A+ G+D   LE CL +++ + GIA LLPY T+FV   V +   +L + FS MRLV A+L+N+VF +L  YL Q+LPAV++C++GKR   NPR+NHWALRDYT  ++++IC   Y   Y  +Q RI KT   AL + KRPLTTHYGAIVG+  LG+  +E  ++P L  K YL  +  +V++   K VRREE  +VFGAL WAVS   + +    RP +                        V +      +P AE + +    E+  R YP    K+E++L  +L E++KA T
Sbjct:   34 PEEDARLSPEAVHVIAQSVHNLPPLSDPAAATLALDAEYRVRQIVQEGIKFMKHSKQNTLLPSHVSIALRVLNVEPVYGF----GAKRRRGNHGAGAFVGAVAGALGKPDAAGGGTQREGQFGQVDGVPELFFVHDSEVSVKSLLQAPPPELPLEVTVNAHWLAVDGKQPAISQNPMKQTQREELESGKRES--DGTDGEGTQVEVRAPLKHDLTRELQLYFQHVQDAIFGEDVGQLEACLNSISEDAGIAVLLPYLTKFVKDSVQRSIRDLRVLFSVMRLVRAMLENEVFSELERYLHQLLPAVMSCVVGKRLCRNPRENHWALRDYTAGLLREICGTAYAKGYVGVQQRIVKTFVDALKDVKRPLTTHYGAIVGITCLGKHTVEGVVVPLL--KGYLPKIIGLVEDVRQKSVRREEGSKVFGALAWAVS--EDGVGNGVRPGQNGEASLNGMSDGMQWKAAGAAGGKVSISRMSSVVPRAEEVHERLWREMDRRLYPFGESKSESELAVSLAEQKKAAT 544          
BLAST of Ggra7696.t1 vs. uniprot
Match: A0A7S2ZD09 (Hypothetical protein n=2 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZD09_9RHOD)

HSP 1 Score: 293 bits (751), Expect = 1.780e-90
Identity = 178/458 (38.86%), Postives = 247/458 (53.93%), Query Frame = 0
Query:   17 ETLRVDTEVIRVIGQSIPSMPPFADSAAGTLAHDIEYRIREIVQDAMKFMKHSKRNKLNTNDINAALRLRNVAPILGFSDPKGNSHKVKDNGATGNEREYLKSPIARVKGYLRPQFTAVDGNEDLFFVPDKEMTVKSVIETNMPLVPLDVNLSTHWLAVSGKQPSIPQNPTRKRKASYGEDEDMEPVTKKRK----LPTEVKPLVKHELSRELQLYLEQITTAVQGDDTKHLEQCLYAVAHEKGIAELLPYFTQFVF-KCVTKCDNLPLRFSCMRLVNAILDNDVFDLRLYLQQVLPAVLTCMLGKRFSGNP-RDNHWALRDYTTTVMKKICDRYGHQYPDIQTRITKTCALALDNTKRPLTTHYGAIVGLAALGQRVLERYLLPRLERKTYLSTLEKIVKNSNTKPVRREEACRVFGALFWAVSLARNPLNVSARPSEVDVQLKH-----FLDYLPS 463
            E  R+  E ++ I Q IP M    D  A  LA D EYR+REI+QDA KFM+ SKR+ L T D++AALRLRNV P+ G S                      K P+         +F  V GN +LF+V DKE+ +   I+ ++P VP   +L  HWL+V G QP+I QNP         E  +ME   K+++       E KPLVKH LSRELQLY E +T  + G+D   ++ CL +VA   G+ +LLPYF  FV  K      NL +  + MRLV+A+L N  F +  Y  Q+LP VLTC++ K+   N   ++HW+LRD++  ++  I  R+   YP +Q RITKT   AL + ++PLTTHYGAIVGL ALG  V+   L+P +  K Y S LE+ ++     P+R+ E  + + A+  A     N  +        +V L       FL  LP+
Sbjct:   12 EEARISKETVKTISQGIPGMTDLKDEVALALASDAEYRVREIIQDATKFMRQSKRSLLTTEDVSAALRLRNVEPLYGLS---------------------TKEPL---------KFVKVSGNTNLFYVADKEVDLSEFIQKDLPPVPNLPSLMAHWLSVEGVQPAISQNPPP-------ETNEMESGGKRKRDVSSQQPEFKPLVKHVLSRELQLYYEHVTKHIVGNDNAQVDLCLKSVAEAPGLQQLLPYFVHFVVTKGNANLKNLKVLKALMRLVHALLANPYFGIEHYCHQLLPVVLTCVVRKKLGKNQSEEDHWSLRDFSAKIVADISSRFSDTYPTLQPRITKTYLGALLDVQKPLTTHYGAIVGLTALGPNVVNFLLVPHI--KAYTSQLEEELQQEPLTPIRKYELAKTYSAIMLAAGTHMNAGDAKKDGDSDEVMLSSKPDHGFLKALPT 430          
BLAST of Ggra7696.t1 vs. uniprot
Match: A0A7S0WSE8 (Hypothetical protein (Fragment) n=1 Tax=Pyramimonas obovata TaxID=1411642 RepID=A0A7S0WSE8_9CHLO)

HSP 1 Score: 289 bits (740), Expect = 3.990e-89
Identity = 175/468 (37.39%), Postives = 256/468 (54.70%), Query Frame = 0
Query:    8 PSNANVLPHETLRVDTEVIRVIGQSIPSMPPFADSAAGTLAHDIEYRIREIVQDAMKFMKHSKRNKLNTNDINAALRLRNVAPILGFSDPKGNSHKVKDNGATGNEREYLKSPIARVKGYLRPQFTAVDGNEDLFFVPDKEMTVKSVIETNMPLVPLDVNLSTHWLAVSGKQPSIPQNPT---------RKRKASYGEDEDMEPVTKKRKL---------PTEVKPLVKHELSRELQLYLEQITTAVQGDDTKHLEQCLYAVAHEKGIAELLPYFTQFVFKCVT-KCDNLPLRFSCMRLVNAILDNDVFDLRLYLQQVLPAVLTCMLGKRFSGNPRDNHWALRDYTTTVMKKICDRYGHQYPDIQTRITKTCALALDNTKRPLTTHYGAIVGLAALGQRVLERYLLPRLERKTYLSTLE-KIVKNSNTKPVRREEACRVFGALFWAVSLARNP---LNVSARPSEVDV 452
            P+   V   E   V  + I+++  S+  +   +D  A +L+ D+EYR+REI+Q+++KFM+HSKR+ L T D+N  LRLRNV P+ GF              A G E  +   P               +G++D+FF+ DKE+    +I    P  P+DV +  HWLAV G QP+IP+NP          R R+ + G        T               TEV P+  H LS+ELQLY E+IT  V+G D +  +  L ++A + G+ +LLPYFT F+   VT     LPL    MR++  +L N   ++ LYL Q++P+++TCM+ KR S    ++HW LRDY+ + +  +C R+G  YP+IQ R+T+T   A  +  RPL THYGAI+GLA+LG RV +  LLP L   TYL+ L+ ++   S    ++R EA RV+GAL  AVS   +    L+ S  P+  DV
Sbjct:    4 PTKVVVTHSEAPHVRPDTIKIVADSV-GISKLSDEVASSLSPDVEYRMREIIQESLKFMRHSKRSILTTEDVNCGLRLRNVEPLYGF--------------AAGTEPLHFAQP---------------EGHKDVFFLKDKELEFDEIITAPFPKCPVDVTVVPHWLAVEGVQPAIPENPPPPVEKPSLKRTREEAGGARPAANGATPNGSAGKGPGLAGTATEVMPVASHLLSKELQLYFERITELVKGPDERLRDAALLSLASDPGLHQLLPYFTTFISNEVTANLKALPLLSVLMRMLRGLLLNPHHNIELYLHQLMPSIITCMVAKRLSKEATEDHWRLRDYSASTLALVCGRFGAAYPNIQPRVTRTLVRAFLDPARPLATHYGAIMGLASLGPRVSKLLLLPNLP--TYLAWLQPELCAGSQPNELKRMEANRVYGALQVAVSTCMSAELRLDPSPAPTAKDV 439          
BLAST of Ggra7696.t1 vs. uniprot
Match: transcription initiation factor TFIID subunit 6 isoform X2 n=1 Tax=Lactuca sativa TaxID=4236 RepID=UPI000CD92D9C (transcription initiation factor TFIID subunit 6 isoform X2 n=1 Tax=Lactuca sativa TaxID=4236 RepID=UPI000CD92D9C)

HSP 1 Score: 285 bits (730), Expect = 1.950e-87
Identity = 165/415 (39.76%), Postives = 244/415 (58.80%), Query Frame = 0
Query:   21 VDTEVIRVIGQSIPSMPPFADSAAGTLAHDIEYRIREIVQDAMKFMKHSKRNKLNTNDINAALRLRNVAPILGFSDPKGNSHKVKDNGATGNEREYLKSPIARVKGYLRPQFTAVDGNEDLFFVPDKEMTVKSVIETNMPLVPLDVNLSTHWLAVSGKQPSIPQNPTRKRKASYGEDEDMEPVTKKRKLPTEVKPLVKHELSRELQLYLEQITT-AVQGDDTKHLEQCLYAVAHEKGIAELLPYFTQFVFKCVTK-CDNLPLRFSCMRLVNAILDNDVFDLRLYLQQVLPAVLTCMLGKRFSGNPRDNHWALRDYTTTVMKKICDRYGHQYPDIQTRITKTCALALDNTKRPLTTHYGAIVGLAALGQRVLERYLLPRLERKTYLSTLEKIVKNSNTKPVRREEACRVFGALFWA 433
            V  E + VI QSI  +   +  AA  LA D+EYR+REI+Q+A+K M HSKR  L T+D+++AL +RNV PI GF+                        P+         +F    G++DLF++ DK++  K VIE  +P  PLD ++  HWLA+ G QP+IP+N   +   +  + +  +P  K  +LP +++  VKH LSRELQLY  +IT  AV   DT   ++ L ++A + G+  L+PYFT F+   V++  +N  L F+ MRLV ++L N    +  YL Q++P V+TC++ +R      DNHW LRD++  ++  IC R+GH Y D+QTR+T+T   +  + K+ LT HYGAI GL ALG  V+ RY+LP LE  +YL  LE+++  +  K + R EA RV+GAL  A
Sbjct:    4 VPQETVEVIAQSI-GINNLSPDAALALAPDVEYRMREIMQEAIKCMHHSKRTTLTTDDVDSALSMRNVEPIYGFTSG---------------------DPL---------RFKRALGHKDLFYIDDKDVDFKDVIEAPLPKAPLDTSIFCHWLAIEGVQPAIPENAPVEVITTLPDTK--KPEQKIDELPVDIRLPVKHVLSRELQLYFNKITELAVNTPDTDLFKEALMSLATDSGLHPLVPYFTCFIEDEVSRGLNNFHLLFALMRLVWSLLQNPHIHIEPYLHQLMPPVVTCIVARRLGNRIADNHWELRDFSANLVATICKRFGHSYGDLQTRLTRTLHKSFSDRKQTLTQHYGAIQGLTALGPHVVRRYILPDLE--SYLGFLEEMILENKQKEITRHEAWRVYGALLRA 383          
BLAST of Ggra7696.t1 vs. uniprot
Match: A0A067K3Z7 (TAF domain-containing protein n=1 Tax=Jatropha curcas TaxID=180498 RepID=A0A067K3Z7_JATCU)

HSP 1 Score: 287 bits (735), Expect = 2.350e-87
Identity = 169/416 (40.62%), Postives = 244/416 (58.65%), Query Frame = 0
Query:   21 VDTEVIRVIGQSIPSMPPFADSAAGTLAHDIEYRIREIVQDAMKFMKHSKRNKLNTNDINAALRLRNVAPILGFSDPKGNSHKVKDNGATGNEREYLKSPIARVKGYLRPQFTAVDGNEDLFFVPDKEMTVKSVIETNMPLVPLDVNLSTHWLAVSGKQPSIPQNPTRKRKASYGEDEDMEPVTKKRKLPTEVKPLVKHELSRELQLYLEQITT-AVQGDDTKHLEQCLYAVAHEKGIAELLPYFTQFVFKCVTK-CDNLPLRFSCMRLVNAILDNDVFDLRLYLQQVLPAVLTCMLGKRFSGNPRDNHWALRDYTTTVMKKICDRYGHQYPDIQTRITKTCALALDNTKRPLTTHYGAIVGLAALGQRVLERYLLPRLERKTYLSTLE-KIVKNSNTKPVRREEACRVFGALFWA 433
            V  E I+VI QSI  +    D  A  LA D+EYR+REI+Q+A+K M+HSKRN L T+D++ AL LRNV P+ GF+                      + P+         QF    G+ DLF++ DK++  K VIE  +P  PLD ++  HWLA+ G QP+IP+N   +  A   + ++ E   +K +LP ++K  VKH LSRELQLY ++IT   +   D+   ++ L ++A + G+  L+PYFT F+   V++  ++  L F+ MR+V ++L N    +  YL Q++P+V+TC++ KR      DNHW LRD+T  ++  IC R+GH Y  +QTR+TKT   AL + KR LT HYGAI GLAALG  V+   LLP LE   YL  LE +++       ++R EA RV+GAL  A
Sbjct:    4 VPKETIQVIAQSI-GINNLNDDVALALAPDVEYRMREIMQEAIKCMRHSKRNTLTTDDVDGALHLRNVEPMYGFAS---------------------RGPL---------QFKRAIGHRDLFYIDDKDVDFKDVIEAPLPKAPLDTSIVCHWLAIDGVQPAIPENAPLEVIAPPPDSKNNE---QKDRLPVDIKLPVKHVLSRELQLYFDKITELTLSKSDSSLFKEALVSLATDSGLHPLVPYFTCFIADEVSRGLNDYSLLFALMRVVRSLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRFADNHWELRDFTANLVASICKRFGHVYSSLQTRLTKTLLNALLDPKRSLTQHYGAIQGLAALGPNVVRLLLLPNLE--PYLQVLEPEMLLEKQKNEMKRHEAWRVYGALLHA 383          
BLAST of Ggra7696.t1 vs. uniprot
Match: A0A6A6KTL6 (TAF domain-containing protein n=1 Tax=Hevea brasiliensis TaxID=3981 RepID=A0A6A6KTL6_HEVBR)

HSP 1 Score: 283 bits (723), Expect = 5.040e-87
Identity = 170/415 (40.96%), Postives = 245/415 (59.04%), Query Frame = 0
Query:   21 VDTEVIRVIGQSIPSMPPFADSAAGTLAHDIEYRIREIVQDAMKFMKHSKRNKLNTNDINAALRLRNVAPILGFSDPKGNSHKVKDNGATGNEREYLKSPIARVKGYLRPQFTAVDGNEDLFFVPDKEMTVKSVIETNMPLVPLDVNLSTHWLAVSGKQPSIPQNPTRKRKASYGEDEDMEPVTKKRKLPTEVKPLVKHELSRELQLYLEQITT-AVQGDDTKHLEQCLYAVAHEKGIAELLPYFTQFVFKCVT-KCDNLPLRFSCMRLVNAILDNDVFDLRLYLQQVLPAVLTCMLGKRFSGNPRDNHWALRDYTTTVMKKICDRYGHQYPDIQTRITKTCALALDNTKRPLTTHYGAIVGLAALGQRVLERYLLPRLERKTYLSTLEKIVKNSNTKPVRREEACRVFGALFWA 433
            V  E I VI QSI  +   ++ AA +LA D+EYR+RE++Q+A+K M+HSKR  L ++D++AAL LRNV PI GF              A+G        P+         QF    G+ DLF++ DK++  K VIE  +P  PLD ++  HWLA+ G QP+IP+N   +  A   + ++ E   +K KLP ++K  VKH LSRELQLY ++IT   ++  D+   ++ L ++A + G+  L+PYFT F+   V    ++  L F+ MR+V ++L N    +  YL Q++P+V+TC++ KR      DNHW LRD+T +++  IC R+GH Y  +QTR+TKT   AL + KR LT HYGAI GLAALG  V+   +LP LE   YL  LE  +       ++R EA RV+GAL  A
Sbjct:    4 VPKETIEVIAQSI-GINNLSEDAALSLAPDVEYRMREVMQEAIKCMRHSKRTILTSDDVDAALNLRNVEPIYGF--------------ASGG-------PL---------QFKRAIGHRDLFYIDDKDVDFKDVIEAPLPKAPLDTSVVCHWLAIEGVQPAIPENAPLEVIAPPSDGKNSE---QKDKLPVDIKLPVKHVLSRELQLYFDKITELTLRRSDSALFKEALVSLATDSGLHPLVPYFTCFIADEVACGLNDYKLLFALMRVVWSLLQNPHIHIEPYLHQLMPSVVTCLVAKRLGNRFADNHWELRDFTASLVASICKRFGHIYGSLQTRLTKTLLNALLDPKRSLTQHYGAIQGLAALGPNVVRLLVLPNLE--PYLRVLEPEILEKQRNEMKRYEAWRVYGALLRA 382          
BLAST of Ggra7696.t1 vs. uniprot
Match: A0A2J6KLJ6 (TAF domain-containing protein n=2 Tax=Lactuca TaxID=4235 RepID=A0A2J6KLJ6_LACSA)

HSP 1 Score: 285 bits (730), Expect = 7.180e-87
Identity = 165/415 (39.76%), Postives = 244/415 (58.80%), Query Frame = 0
Query:   21 VDTEVIRVIGQSIPSMPPFADSAAGTLAHDIEYRIREIVQDAMKFMKHSKRNKLNTNDINAALRLRNVAPILGFSDPKGNSHKVKDNGATGNEREYLKSPIARVKGYLRPQFTAVDGNEDLFFVPDKEMTVKSVIETNMPLVPLDVNLSTHWLAVSGKQPSIPQNPTRKRKASYGEDEDMEPVTKKRKLPTEVKPLVKHELSRELQLYLEQITT-AVQGDDTKHLEQCLYAVAHEKGIAELLPYFTQFVFKCVTK-CDNLPLRFSCMRLVNAILDNDVFDLRLYLQQVLPAVLTCMLGKRFSGNPRDNHWALRDYTTTVMKKICDRYGHQYPDIQTRITKTCALALDNTKRPLTTHYGAIVGLAALGQRVLERYLLPRLERKTYLSTLEKIVKNSNTKPVRREEACRVFGALFWA 433
            V  E + VI QSI  +   +  AA  LA D+EYR+REI+Q+A+K M HSKR  L T+D+++AL +RNV PI GF+                        P+         +F    G++DLF++ DK++  K VIE  +P  PLD ++  HWLA+ G QP+IP+N   +   +  + +  +P  K  +LP +++  VKH LSRELQLY  +IT  AV   DT   ++ L ++A + G+  L+PYFT F+   V++  +N  L F+ MRLV ++L N    +  YL Q++P V+TC++ +R      DNHW LRD++  ++  IC R+GH Y D+QTR+T+T   +  + K+ LT HYGAI GL ALG  V+ RY+LP LE  +YL  LE+++  +  K + R EA RV+GAL  A
Sbjct:    4 VPQETVEVIAQSI-GINNLSPDAALALAPDVEYRMREIMQEAIKCMHHSKRTTLTTDDVDSALSMRNVEPIYGFTSG---------------------DPL---------RFKRALGHKDLFYIDDKDVDFKDVIEAPLPKAPLDTSIFCHWLAIEGVQPAIPENAPVEVITTLPDTK--KPEQKIDELPVDIRLPVKHVLSRELQLYFNKITELAVNTPDTDLFKEALMSLATDSGLHPLVPYFTCFIEDEVSRGLNNFHLLFALMRLVWSLLQNPHIHIEPYLHQLMPPVVTCIVARRLGNRIADNHWELRDFSANLVATICKRFGHSYGDLQTRLTRTLHKSFSDRKQTLTQHYGAIQGLTALGPHVVRRYILPDLE--SYLGFLEEMILENKQKEITRHEAWRVYGALLRA 383          
BLAST of Ggra7696.t1 vs. uniprot
Match: A0A5J5A457 (TAF domain-containing protein n=2 Tax=Nyssaceae TaxID=4289 RepID=A0A5J5A457_9ASTE)

HSP 1 Score: 286 bits (731), Expect = 9.970e-87
Identity = 171/424 (40.33%), Postives = 245/424 (57.78%), Query Frame = 0
Query:   21 VDTEVIRVIGQSIPSMPPFADSAAGTLAHDIEYRIREIVQDAMKFMKHSKRNKLNTNDINAALRLRNVAPILGFSDPKGNSHKVKDNGATGNEREYLKSPIARVKGYLRPQFTAVDGNEDLFFVPDKEMTVKSVIETNMPLVPLDVNLSTHWLAVSGKQPSIPQN--------PTRKRKASYGEDEDMEPVTKKRKLPTEVKPLVKHELSRELQLYLEQITT-AVQGDDTKHLEQCLYAVAHEKGIAELLPYFTQFVFKCVTK-CDNLPLRFSCMRLVNAILDNDVFDLRLYLQQVLPAVLTCMLGKRFSGNPRDNHWALRDYTTTVMKKICDRYGHQYPDIQTRITKTCALALDNTKRPLTTHYGAIVGLAALGQRVLERYLLPRLERKTYLSTLE-KIVKNSNTKPVRREEACRVFGALFWA 433
            V  E I VI QSI  +   +   A  LA D+EYR+REI+Q+AMK M+HSKR  L T+D+++AL LRNV PI GF              A+G+       P+         +F    G++DLF++ DK++  K VIE  +P  PLD ++  HWLA+ G QP+IP+N        P+  +K    +D           LP ++K  VKH LSRELQLY ++IT   V   D+   ++ L ++A + G+  L+PYFT F+   V++   N PL F+ MR+V+++L N    +  YL Q++P+++TC++ KR      DNHW LRD+T  ++  IC R+GH Y ++QTR+TKT   A  + KR LT HYGAI GLAALG  V+   +LP LE  TYL  LE +++       ++R EA RV+GAL  A
Sbjct:    4 VPKETIEVIAQSI-GINNLSPDVALALAPDVEYRMREIMQEAMKCMRHSKRTVLTTDDVDSALNLRNVEPIYGF--------------ASGD-------PL---------RFRRAVGHKDLFYIDDKDVDFKDVIEAPLPKAPLDTSIVCHWLAIEGVQPAIPENAPIEVITAPSDSKKTEQKDDG----------LPVDIKLPVKHVLSRELQLYFDKITELTVSRSDSVLFKEALVSLATDSGLHPLVPYFTCFIADEVSRGLSNFPLLFALMRVVSSLLQNPHIHIEPYLHQLMPSIVTCLVAKRLGNRFADNHWELRDFTANLVASICKRFGHIYNNLQTRLTKTLLHAFLDPKRALTQHYGAIQGLAALGPNVVHHLILPNLE--TYLQLLEPEMLVEKQKNEMKRHEAWRVYGALLRA 384          
BLAST of Ggra7696.t1 vs. uniprot
Match: A0A067EWU3 (TAF domain-containing protein n=5 Tax=Citrus TaxID=2706 RepID=A0A067EWU3_CITSI)

HSP 1 Score: 285 bits (730), Expect = 1.370e-86
Identity = 178/416 (42.79%), Postives = 242/416 (58.17%), Query Frame = 0
Query:   21 VDTEVIRVIGQSIPSMPPFADSAAGTLAHDIEYRIREIVQDAMKFMKHSKRNKLNTNDINAALRLRNVAPILGFSDPKGNSHKVKDNGATGNEREYLKSPIARVKGYLRPQFTAVDGNEDLFFVPDKEMTVKSVIETNMPLVPLDVNLSTHWLAVSGKQPSIPQNPTRKRKASYGEDEDMEPVTKKRKLPTEVKPLVKHELSRELQLYLEQITT-AVQGDDTKHLEQCLYAVAHEKGIAELLPYFTQFVFKCVTK-CDNLPLRFSCMRLVNAILDNDVFDLRLYLQQVLPAVLTCMLGKRFSGNPRDNHWALRDYTTTVMKKICDRYGHQYPDIQTRITKTCALALDNTKRPLTTHYGAIVGLAALGQRVLERYLLPRLERKTYLSTLE-KIVKNSNTKPVRREEACRVFGALFWA 433
            V  E + VI QSI  +  F+  AA  LA D+EYRIREI+Q+A+K M+HS+R  L T+D++ AL+LRNV P+ GF              A+G              G LR  F    G  DLF++ DK++  K VIE  +P  PLD ++  HWLA+ G QP IP+N   +  A+     + E   +K  LP E+K  VKH LSRELQLY ++IT  AV   D+   +Q L ++A + G+  L+PYFT FV   V++  +N  L F+ MR+V  +L N    +  YL Q++P+V+TC++ KR      DNHW LRD+T  ++  IC RYGH Y  +QTR+TKT   AL + KR LT HYGA+ GLAALG  V+   LLP L    YLS LE +++       V+R EA RV+GAL  A
Sbjct:    4 VPKETVEVIAQSI-GISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDVDEALKLRNVEPVYGF--------------ASG--------------GPLR--FRRAIGYRDLFYLDDKDVEFKDVIEAPLPRAPLDTSIVCHWLAIEGVQPVIPENAPVQAIAAPSNGTNNE---QKDGLPVEIKLPVKHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGLNNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRLADNHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLLLPNLG--PYLSLLEPEMLLEKQKNEVKRHEAWRVYGALLQA 383          
The following BLAST results are available for this feature:
BLAST of Ggra7696.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IY802.390e-22866.47Transcription initiation factor TFIID subunit 6 n=... [more]
R7QB256.720e-11541.46TAF domain-containing protein n=1 Tax=Chondrus cri... [more]
A0A7S2ZD091.780e-9038.86Hypothetical protein n=2 Tax=Rhodosorus marinus Ta... [more]
A0A7S0WSE83.990e-8937.39Hypothetical protein (Fragment) n=1 Tax=Pyramimona... [more]
transcription initiation factor TFIID subunit 6 isoform X2 n=1 Tax=Lactuca sativa TaxID=4236 RepID=UPI000CD92D9C1.950e-8739.76transcription initiation factor TFIID subunit 6 is... [more]
A0A067K3Z72.350e-8740.63TAF domain-containing protein n=1 Tax=Jatropha cur... [more]
A0A6A6KTL65.040e-8740.96TAF domain-containing protein n=1 Tax=Hevea brasil... [more]
A0A2J6KLJ67.180e-8739.76TAF domain-containing protein n=2 Tax=Lactuca TaxI... [more]
A0A5J5A4579.970e-8740.33TAF domain-containing protein n=2 Tax=Nyssaceae Ta... [more]
A0A067EWU31.370e-8642.79TAF domain-containing protein n=5 Tax=Citrus TaxID... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 486..503
NoneNo IPR availableGENE3D1.25.40.770coord: 217..419
e-value: 1.9E-55
score: 189.5
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 178..199
NoneNo IPR availableCDDcd08050TAF6Ccoord: 218..433
e-value: 5.2116E-76
score: 236.385
IPR004823TATA box binding protein associated factor (TAF)SMARTSM00803TAF_clscoord: 19..86
e-value: 1.8E-21
score: 87.3
IPR004823TATA box binding protein associated factor (TAF)PFAMPF02969TAFcoord: 22..84
e-value: 1.8E-18
score: 66.4
IPR009072Histone-foldGENE3D1.10.20.10Histone, subunit Acoord: 19..85
e-value: 1.4E-20
score: 75.1
IPR009072Histone-foldSUPERFAMILY47113Histone-foldcoord: 20..84
IPR011442TAF6, C-terminal HEAT repeat domainPFAMPF07571TAF6_Ccoord: 310..397
e-value: 1.2E-25
score: 89.6
IPR037796Transcription initiation factor TFIID subunit 6PANTHERPTHR10221TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 6coord: 21..441
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 227..441

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000088_piloncontigtig00000088_pilon:83037..84548 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra7696.t1Ggra7696.t1Gracilaria gracilis GNS1m malemRNAtig00000088_pilon 83037..84548 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra7696.t1 ID=Ggra7696.t1|Name=Ggra7696.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=504bp
MAAKRAKPSNANVLPHETLRVDTEVIRVIGQSIPSMPPFADSAAGTLAHD
IEYRIREIVQDAMKFMKHSKRNKLNTNDINAALRLRNVAPILGFSDPKGN
SHKVKDNGATGNEREYLKSPIARVKGYLRPQFTAVDGNEDLFFVPDKEMT
VKSVIETNMPLVPLDVNLSTHWLAVSGKQPSIPQNPTRKRKASYGEDEDM
EPVTKKRKLPTEVKPLVKHELSRELQLYLEQITTAVQGDDTKHLEQCLYA
VAHEKGIAELLPYFTQFVFKCVTKCDNLPLRFSCMRLVNAILDNDVFDLR
LYLQQVLPAVLTCMLGKRFSGNPRDNHWALRDYTTTVMKKICDRYGHQYP
DIQTRITKTCALALDNTKRPLTTHYGAIVGLAALGQRVLERYLLPRLERK
TYLSTLEKIVKNSNTKPVRREEACRVFGALFWAVSLARNPLNVSARPSEV
DVQLKHFLDYLPSAEAIFKAGEVELGERFYPHRHGKTETQLTAALLEERK
AKT*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004823TAF_TATA-bd
IPR009072Histone-fold
IPR011442TAF6_C
IPR037796TAF6
IPR016024ARM-type_fold