Ggra7694.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra7694.t1
Unique NameGgra7694.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length205
Homology
BLAST of Ggra7694.t1 vs. uniprot
Match: A0A2V3IX40 (Ran-specific GTPase-activating protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IX40_9FLOR)

HSP 1 Score: 286 bits (733), Expect = 6.400e-96
Identity = 154/202 (76.24%), Postives = 169/202 (83.66%), Query Frame = 0
Query:    1 MTNPVIEIAPPSNAAAEPETTPAADEDCSKEYEPVVKLEQVETKTGEEDEDVLFKMRAKLFRFSKELKEWKERGTGDVRILEHKQTKKIRLLMRREKTLKICMNQYVNPNTELRENVGSERSWVWHAIDYADDERDQALLAIRFRDSKDANAFKDAYDTAREHMATLHTQHTTANQKAEGNGSATAEATTETKSEDATATKE 202
            MTNPV+E AP +NAA E E    ADEDCSK YEPVVKLE+VETKTGEEDE+VLFKMR+KLFRFSKELKEWKERGTGDVRILEHK++KK+RLLMRREKTLKICMNQYVNP TELRENVGS+RSWVWHA+DYAD+ERD+ALLAIRFRDSKDAN FKDAYD ARE M+ L TQ     QKAE +  A   A TE K  +A   KE
Sbjct:    1 MTNPVVENAPAANAAVEGENGLVADEDCSKHYEPVVKLEKVETKTGEEDEEVLFKMRSKLFRFSKELKEWKERGTGDVRILEHKESKKVRLLMRREKTLKICMNQYVNPETELRENVGSDRSWVWHAVDYADEERDEALLAIRFRDSKDANEFKDAYDKARERMSGLRTQLEGGEQKAEPDAEA---AVTEKKEAEAEXKKE 199          
BLAST of Ggra7694.t1 vs. uniprot
Match: R7QK89 (RanBD1 domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QK89_CHOCR)

HSP 1 Score: 235 bits (599), Expect = 1.680e-75
Identity = 116/167 (69.46%), Postives = 141/167 (84.43%), Query Frame = 0
Query:    1 MTNPVIEIAPPSNAAAEPETTPAADEDCSKEYEPVVKLEQVETKTGEEDEDVLFKMRAKLFRFSKELKEWKERGTGDVRILEHKQTKKIRLLMRREKTLKICMNQYVNPNTELRENVGSERSWVWHAIDYADDERDQALLAIRFRDSKDANAFKDAYDTAREHMATL 167
            M++PV   A P+    + E     DEDCSKEYEPVV+L +VETKTGEEDE+V+FKMR+KLFRF+KE KEWKERGTGDVRIL+HK+ +KIRLLMRREKTLKIC+N Y+NP+ ELRENVGS+RSWVWH +DYAD ERD+A LAIRFRDS +A AFK+AYD+AR+++  L
Sbjct:    1 MSDPVATPAAPAAPTKDAEAI-VKDEDCSKEYEPVVRLAEVETKTGEEDEEVVFKMRSKLFRFNKEQKEWKERGTGDVRILKHKENRKIRLLMRREKTLKICLNHYINPSVELRENVGSDRSWVWHGVDYADGERDEATLAIRFRDSTNATAFKEAYDSARDYLRKL 166          
BLAST of Ggra7694.t1 vs. uniprot
Match: A0A7S0ZC19 (Hypothetical protein n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZC19_9RHOD)

HSP 1 Score: 194 bits (494), Expect = 8.050e-60
Identity = 92/143 (64.34%), Postives = 120/143 (83.92%), Query Frame = 0
Query:   25 DEDCSKEYEPVVKLEQVETKTGEEDEDVLFKMRAKLFRFSKELKEWKERGTGDVRILEHKQTKKIRLLMRREKTLKICMNQYVNPNTELRENVGSERSWVWHAIDYADDERDQALLAIRFRDSKDANAFKDAYDTAREHMATL 167
            +E+C+ E++PVV+L++ E  TGEE E+VLFKMR+KLFRF  + ++WKERGTGDVR+L+H +T KIRLLMRREKTLKICMN YVN + EL+ENVGS+RSWVW+A+DYA+ ERD+ +LAIRF ++++A AFK  YD AR HM  L
Sbjct:   35 EEECAVEFKPVVQLDEQEVVTGEESEEVLFKMRSKLFRFDADGQQWKERGTGDVRLLKHNETNKIRLLMRREKTLKICMNHYVNADVELQENVGSDRSWVWNAVDYAEGERDECVLAIRFANTENAQAFKKEYDAARAHMKEL 177          
BLAST of Ggra7694.t1 vs. uniprot
Match: A0A7S1TKA7 (Hypothetical protein n=1 Tax=Erythrolobus australicus TaxID=1077150 RepID=A0A7S1TKA7_9RHOD)

HSP 1 Score: 195 bits (495), Expect = 8.310e-60
Identity = 93/143 (65.03%), Postives = 121/143 (84.62%), Query Frame = 0
Query:   25 DEDCSKEYEPVVKLEQVETKTGEEDEDVLFKMRAKLFRFSKELKEWKERGTGDVRILEHKQTKKIRLLMRREKTLKICMNQYVNPNTELRENVGSERSWVWHAIDYADDERDQALLAIRFRDSKDANAFKDAYDTAREHMATL 167
            +E+C+ ++ PVV+L++ E  TGEEDE+VLFKMRAKLFRF +E ++WKERGTGDVR+L+HK+T KIRLLMRREKTLKICMN YVN   EL+ENVGS+RSWVW+A+DYA+ ERD+ +LAIRF ++++A AFK  Y +A  HM +L
Sbjct:   33 EEECAADFAPVVQLDEQEVVTGEEDEEVLFKMRAKLFRFDREGQQWKERGTGDVRLLKHKETSKIRLLMRREKTLKICMNHYVNAEVELQENVGSDRSWVWNAVDYAEGERDECVLAIRFSNTENAQAFKKEYVSACAHMKSL 175          
BLAST of Ggra7694.t1 vs. uniprot
Match: M2XB10 (E3 SUMO-protein ligase RanBP2 n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2XB10_GALSU)

HSP 1 Score: 186 bits (473), Expect = 1.120e-56
Identity = 89/143 (62.24%), Postives = 116/143 (81.12%), Query Frame = 0
Query:   25 DEDCSKEYEPVVKLEQVETKTGEEDEDVLFKMRAKLFRFSKELKEWKERGTGDVRILEHKQTKKIRLLMRREKTLKICMNQYVNPNTELRENVGSERSWVWHAIDYADDERDQALLAIRFRDSKDANAFKDAYDTAREHMATL 167
            +ED S  ++P+V L++V+  TGEE+EDVL+K RAKLFRF K+  +WKERGTGD++IL+HK TKKIRLLMRREKTLKIC+N YVNP+ +L ENVGS+RSWVW+AIDYAD+  D+ +LA+RF +S+ A  FK AYD AR  +  +
Sbjct:   29 EEDYSVPFKPLVTLDEVQVTTGEEEEDVLYKNRAKLFRFDKQGSQWKERGTGDLKILQHKDTKKIRLLMRREKTLKICLNHYVNPSIQLEENVGSDRSWVWNAIDYADEVADECVLAVRFPNSEQAKKFKQAYDDARSALEKI 171          
BLAST of Ggra7694.t1 vs. uniprot
Match: A0A7S3E904 (Hypothetical protein n=2 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3E904_9RHOD)

HSP 1 Score: 186 bits (473), Expect = 5.880e-56
Identity = 92/153 (60.13%), Postives = 119/153 (77.78%), Query Frame = 0
Query:   15 AAEPETTPAADEDCSKEYEPVVKLEQVETKTGEEDEDVLFKMRAKLFRFSKELKEWKERGTGDVRILEHKQTKKIRLLMRREKTLKICMNQYVNPNTELRENVGSERSWVWHAIDYADDERDQALLAIRFRDSKDANAFKDAYDTAREHMATL 167
            A + E  P  +E+C  ++EPVVKL +V+TKTGEEDE+VL+K RAKLFR + E   WKERG GD++IL+H + K+IRLLMRREKTLKIC+N YVN + EL+EN+GSERSWVW A+DYAD ERD+ +LAIRF + + A  F+  YD AR++M  L
Sbjct:   61 AEDEEDKPVEEEECQADFEPVVKLSEVDTKTGEEDEEVLYKQRAKLFRHAGE-GGWKERGLGDIKILKHNENKRIRLLMRREKTLKICLNHYVNTDIELQENIGSERSWVWSAVDYADGERDECVLAIRFPNVEIAQEFRKEYDKARDYMKAL 212          
BLAST of Ggra7694.t1 vs. uniprot
Match: A0A5J4YZE7 (Ran-specific GTPase-activating protein n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YZE7_PORPP)

HSP 1 Score: 182 bits (463), Expect = 4.540e-55
Identity = 90/145 (62.07%), Postives = 117/145 (80.69%), Query Frame = 0
Query:   23 AADEDCSKEYEPVVKLEQVETKTGEEDEDVLFKMRAKLFRFSKELKEWKERGTGDVRILEHKQTKKIRLLMRREKTLKICMNQYVNPNTELRENVGSERSWVWHAIDYADDERDQALLAIRFRDSKDANAFKDAYDTAREHMATL 167
            A +E+C+ +++PVV+LE+ ET TGEEDE V +KMRAKLFRF+ E +EWKERGTGDVR L+HK+T KIRLLMRREKTLKIC+N YVN   EL+EN GS+RSW+W+AIDYA+ ERD+ +LAIRF +S++A  FK  ++  +  M  L
Sbjct:   51 ADEEECAADFKPVVQLEEQETVTGEEDETVEWKMRAKLFRFNTESQEWKERGTGDVRFLKHKETGKIRLLMRREKTLKICLNHYVNTTAELQENFGSDRSWMWNAIDYAEGERDECVLAIRFANSENAAEFKKQFEFYQAEMKKL 195          
BLAST of Ggra7694.t1 vs. uniprot
Match: A0A5C5FZR3 (RanBP1 domain-containing protein n=1 Tax=Rhodotorula diobovata TaxID=5288 RepID=A0A5C5FZR3_9BASI)

HSP 1 Score: 172 bits (437), Expect = 7.610e-51
Identity = 98/181 (54.14%), Postives = 127/181 (70.17%), Query Frame = 0
Query:   14 AAAEPETTPAADEDCSKEYEPVVKLEQ-VETKTGEEDEDVLFKMRAKLFRFSKELKEWKERGTGDVRILEHKQTKKIRLLMRREKTLKICMNQYVNPNTELRENVGSERSWVWH-AIDYADDERDQALLAIRFRDSKDANAFKDAYDTAREHMATLHTQHTTANQKAEGNGSATAEATTET 192
            +A EP T  A  E+ S  +EPV+KL+Q VE KT EEDE+VLFKMRAKLFRF  +  EWKERGTGDVR+L+HKQ+KK+RL+MRR+KTLK+C N Y+ P   L  N+GS+RSWV++ A D +D E     LAIRF +S++AN FKDA+  A+E   TL    + A + A  +    A+ATT T
Sbjct:    2 SAEEPTTAAAQVEESSAHFEPVIKLDQTVEVKTHEEDEEVLFKMRAKLFRFIADSSEWKERGTGDVRLLQHKQSKKVRLVMRRDKTLKVCANHYITPEMALSPNIGSDRSWVYNVAADVSDGEPTAETLAIRFANSENANLFKDAFTQAQETNKTLLGSASAAPEVAASDAPVAADATTTT 182          
BLAST of Ggra7694.t1 vs. uniprot
Match: A0A7R9UQ13 (Hypothetical protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A7R9UQ13_DIALT)

HSP 1 Score: 172 bits (436), Expect = 1.140e-50
Identity = 86/145 (59.31%), Postives = 110/145 (75.86%), Query Frame = 0
Query:   23 AADEDCSKEYEPVVKLEQVETKTGEEDEDVLFKMRAKLFRFSKELKEWKERGTGDVRILEHKQTKKIRLLMRREKTLKICMNQYVNPNTELRENVGSERSWVWHAIDYADDERDQALLAIRFRDSKDANAFKDAYDTAREHMATL 167
            A +E+   E+ P+V+LE+V+ KT EE+EDV+FKMRAKLFRF K   +WKERGTGDVR L+HK+TKK+RLLMRREKTLKIC N  ++P   LREN GS+RSWVW A DYA+ E    +LAIRF +S++A  FKD ++  + H  TL
Sbjct:   37 APEEETGGEWAPLVQLEEVKVKTHEEEEDVVFKMRAKLFRFDKPNNQWKERGTGDVRFLQHKETKKVRLLMRREKTLKICANHALSPAMALRENAGSDRSWVWFAQDYAEGELSNDMLAIRFANSENALKFKDEFEKYKTHNGTL 181          
BLAST of Ggra7694.t1 vs. uniprot
Match: A0A8H7BR39 (Single stranded nucleic acid binding protein n=1 Tax=Apophysomyces ossiformis TaxID=679940 RepID=A0A8H7BR39_9FUNG)

HSP 1 Score: 171 bits (432), Expect = 1.200e-50
Identity = 87/139 (62.59%), Postives = 107/139 (76.98%), Query Frame = 0
Query:   32 YEPVVKLEQVETKTGEEDEDVLFKMRAKLFRFSKELKEWKERGTGDVRILEHKQTKKIRLLMRREKTLKICMNQYVNPNTELRENVGSERSWVWH-AIDYADDERDQALLAIRFRDSKDANAFKDAYDTAREHMATLHT 169
            +EPVVKLE+VE KT EEDEDVLFKMRAKLFR+ K+LKEWKERGTGDV+ L+HK+TKK+RLLMRR+KT K+C N YV+    L  NVGS+RSWVW+ A D +D E     LAIRF +S +AN FK+ ++  R+H   L T
Sbjct:   26 FEPVVKLEEVEVKTYEEDEDVLFKMRAKLFRYDKQLKEWKERGTGDVKFLKHKETKKVRLLMRRDKTHKVCANHYVSKEMALSPNVGSDRSWVWNVASDISDGEAKPETLAIRFANSDNANLFKEKFEEVRKHNEELMT 164          
The following BLAST results are available for this feature:
BLAST of Ggra7694.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IX406.400e-9676.24Ran-specific GTPase-activating protein n=1 Tax=Gra... [more]
R7QK891.680e-7569.46RanBD1 domain-containing protein n=1 Tax=Chondrus ... [more]
A0A7S0ZC198.050e-6064.34Hypothetical protein n=1 Tax=Timspurckia oligopyre... [more]
A0A7S1TKA78.310e-6065.03Hypothetical protein n=1 Tax=Erythrolobus australi... [more]
M2XB101.120e-5662.24E3 SUMO-protein ligase RanBP2 n=1 Tax=Galdieria su... [more]
A0A7S3E9045.880e-5660.13Hypothetical protein n=2 Tax=Rhodosorus marinus Ta... [more]
A0A5J4YZE74.540e-5562.07Ran-specific GTPase-activating protein n=1 Tax=Por... [more]
A0A5C5FZR37.610e-5154.14RanBP1 domain-containing protein n=1 Tax=Rhodotoru... [more]
A0A7R9UQ131.140e-5059.31Hypothetical protein n=1 Tax=Diacronema lutheri Ta... [more]
A0A8H7BR391.200e-5062.59Single stranded nucleic acid binding protein n=1 T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000156Ran binding domainSMARTSM00160ranbd_3coord: 32..160
e-value: 4.1E-48
score: 175.9
IPR000156Ran binding domainPFAMPF00638Ran_BP1coord: 42..162
e-value: 5.5E-46
score: 155.8
IPR000156Ran binding domainPROSITEPS50196RANBD1coord: 31..166
score: 38.440365
IPR011993PH-like domain superfamilyGENE3D2.30.29.30coord: 16..180
e-value: 6.5E-53
score: 180.6
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..32
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 167..193
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 167..204
NoneNo IPR availablePANTHERPTHR23138:SF87E3 SUMO-PROTEIN LIGASE RANBP2-RELATEDcoord: 13..196
NoneNo IPR availableSUPERFAMILY50729PH domain-likecoord: 30..164
IPR045255Ran binding protein RanBP1-likePANTHERPTHR23138RAN BINDING PROTEINcoord: 13..196
IPR045256Ran-specific GTPase-activating protein 1, Ran-binding domainCDDcd13179RanBD_RanBP1coord: 31..162
e-value: 4.44912E-70
score: 207.806

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000088_piloncontigtig00000088_pilon:79225..79839 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra7694.t1Ggra7694.t1Gracilaria gracilis GNS1m malemRNAtig00000088_pilon 79225..79839 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra7694.t1 ID=Ggra7694.t1|Name=Ggra7694.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=205bp
MTNPVIEIAPPSNAAAEPETTPAADEDCSKEYEPVVKLEQVETKTGEEDE
DVLFKMRAKLFRFSKELKEWKERGTGDVRILEHKQTKKIRLLMRREKTLK
ICMNQYVNPNTELRENVGSERSWVWHAIDYADDERDQALLAIRFRDSKDA
NAFKDAYDTAREHMATLHTQHTTANQKAEGNGSATAEATTETKSEDATAT
KETA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000156Ran_bind_dom
IPR011993PH-like_dom_sf
IPR045255RanBP1-like
IPR045256RanBP1_RanBD