Ggra7691.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra7691.t1
Unique NameGgra7691.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length160
Homology
BLAST of Ggra7691.t1 vs. uniprot
Match: A0A2V3IWW7 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IWW7_9FLOR)

HSP 1 Score: 272 bits (696), Expect = 7.790e-92
Identity = 137/159 (86.16%), Postives = 148/159 (93.08%), Query Frame = 0
Query:    1 MIVSVVIISYVTGGVIFSRFYGHELRSEQQQAKWLKKLRDATATDWVLLKEDYPEQVATVGEVQIVYKLMGDAVLMLAGVEEHDALLLLELARSMDGSIRGACKIPENKQQQTTVSAERRILQNYANLCLLVDEQIDDGDIDHLDPKVVLKLIRMKPTR 159
            MIVSVVI+ Y +GGVIFSRFYGHELR+EQQQAKWLKKLRDATA DW LLKED PEQ+ATVGEVQI YKL+GD VLM+AGVEEHDALLLLEL RS+D SIRGACKIPENKQQQTTVSAERRILQN+ANLCL++DEQIDDGDIDHLD KVVLKLIRM+P R
Sbjct:    1 MIVSVVIVCYTSGGVIFSRFYGHELRTEQQQAKWLKKLRDATAPDWALLKEDNPEQIATVGEVQITYKLLGDVVLMVAGVEEHDALLLLELVRSLDLSIRGACKIPENKQQQTTVSAERRILQNHANLCLVIDEQIDDGDIDHLDSKVVLKLIRMRPGR 159          
BLAST of Ggra7691.t1 vs. uniprot
Match: R7Q8G7 (Coatomer subunit zeta n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q8G7_CHOCR)

HSP 1 Score: 248 bits (634), Expect = 2.190e-82
Identity = 118/159 (74.21%), Postives = 142/159 (89.31%), Query Frame = 0
Query:    1 MIVSVVIISYVTGGVIFSRFYGHELRSEQQQAKWLKKLRDATATDWVLLKEDYPEQVATVGEVQIVYKLMGDAVLMLAGVEEHDALLLLELARSMDGSIRGACKIPENKQQQTTVSAERRILQNYANLCLLVDEQIDDGDIDHLDPKVVLKLIRMKPTR 159
            M+VS+ I+SY  GGVIFSR+YGHEL +E+QQA+WLKKLRDATA  W LLKED PEQVAT+GEVQ++YKL+GD VL+LAGVEEHDALL+LELAR+M  +IR AC +PENKQ +T  SAERRILQNYA+LCL+VDE +DDGDIDHLDPKV+LKLI+M+P+R
Sbjct:    1 MLVSITIVSYAAGGVIFSRYYGHELHTERQQAEWLKKLRDATALHWPLLKEDNPEQVATIGEVQVMYKLLGDVVLLLAGVEEHDALLMLELARAMTAAIRAACHVPENKQGETRASAERRILQNYASLCLIVDEMVDDGDIDHLDPKVILKLIKMRPSR 159          
BLAST of Ggra7691.t1 vs. uniprot
Match: A0A1X6P678 (Coatomer subunit zeta n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6P678_PORUM)

HSP 1 Score: 184 bits (467), Expect = 6.560e-57
Identity = 97/163 (59.51%), Postives = 122/163 (74.85%), Query Frame = 0
Query:    1 MIVSVVIISYVTGGVIFSRFYGHELRSEQQQAKWLKKLRDATATDWVLLKEDYPEQVATVG----EVQIVYKLMGDAVLMLAGVEEHDALLLLELARSMDGSIRGACKIPENKQQQTTVSAERRILQNYANLCLLVDEQIDDGDIDHLDPKVVLKLIRMKPTR 159
            MI+S VIISY +GGV+F+R YG  L +E  QA W+++L  ATA DW LL+ +  EQVAT+G     VQ++YKL+GD VL+LAG EEHDALLLLE+AR++DG +RGAC+IP  +   T VSAE R+L  Y  LCL+VDE I DG++DHLD K VLKLI MKP R
Sbjct:    1 MILSFVIISYESGGVLFARHYGASLATESAQATWMRRLHAATAADWGLLRSEGEEQVATLGGAEAAVQVLYKLLGDVVLLLAGDEEHDALLLLEVARALDGCLRGACRIPRARDGTTRVSAEGRLLATYHRLCLVVDEVIVDGEVDHLDRKRVLKLIDMKPRR 163          
BLAST of Ggra7691.t1 vs. uniprot
Match: A0A5J4YSU0 (Coatomer subunit zeta n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YSU0_PORPP)

HSP 1 Score: 169 bits (429), Expect = 3.030e-51
Identity = 86/159 (54.09%), Postives = 114/159 (71.70%), Query Frame = 0
Query:    1 MIVSVVIISYVTGGVIFSRFYGHELRSEQQQAKWLKKLRDATATDWVLLKEDYPEQVATVGEVQIVYKLMGDAVLMLAGVEEHDALLLLELARSMDGSIRGACKIPENKQQQTTVSAERRILQNYANLCLLVDEQIDDGDIDHLDPKVVLKLIRMKPTR 159
            MI++ ++ SY  GGV+FSRF+G  L +E QQA WL+++R ATA++W LL  DYPEQVA V E  IV KL+GD V+++AG  EHDALL+LE  R+ +   R  CK+P  K     VSAERR+L++Y NLCL+VDE ID+G IDHLD  ++ K I MKP +
Sbjct:    1 MILTFLVASYTKGGVLFSRFFGPNLATEAQQATWLERIRHATASEWALLASDYPEQVALVDECTIVTKLVGDVVVLVAGNREHDALLILEFLRAFETVFRKVCKVPATKP----VSAERRVLESYWNLCLIVDEMIDEGAIDHLDCALIEKQIAMKPNK 155          
BLAST of Ggra7691.t1 vs. uniprot
Match: A0A061QRI4 (Coatomer subunit zeta n=2 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061QRI4_9CHLO)

HSP 1 Score: 57.4 bits (137), Expect = 1.950e-7
Identity = 37/151 (24.50%), Postives = 79/151 (52.32%), Query Frame = 0
Query:    6 VIISYVTGGVIFSRFYGHELRSEQQQAKWLKKLRDATATDWVLLKEDYPEQVATVGEVQIVYKLMGDAVLMLAGVEEHDALLLLELARSMDGSIRGACKIPENKQQQTTVSAERRILQNYANLCLLVDEQIDDGDIDHLDPKVVLKLIRMK 156
            +++S  +G ++  RF  H+  + + +++    +  A+ +    L ED  E V   G+  IVY  + D +L L G  E+D L+L  + R +  +++   K            +E  + + YA +C+ +DE +++G +D +DP+++ K +++K
Sbjct:    9 ILLSTRSGQILVERF--HDTLTNEAKSEIRAAMYSASTSVVQNLPED-SEHVFGYGDACIVYSPVADIILFLMGSGEYDELMLSSIIRVIKDALKATLK---------KSPSEAAVCEKYAKVCVTLDEVVNEGVLDMVDPELIRKAVKLK 147          
The following BLAST results are available for this feature:
BLAST of Ggra7691.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A2V3IWW77.790e-9286.16Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7Q8G72.190e-8274.21Coatomer subunit zeta n=1 Tax=Chondrus crispus Tax... [more]
A0A1X6P6786.560e-5759.51Coatomer subunit zeta n=1 Tax=Porphyra umbilicalis... [more]
A0A5J4YSU03.030e-5154.09Coatomer subunit zeta n=1 Tax=Porphyridium purpure... [more]
A0A061QRI41.950e-724.50Coatomer subunit zeta n=2 Tax=Tetraselmis sp. GSL0... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.30.450.60coord: 1..157
e-value: 4.5E-14
score: 54.6
NoneNo IPR availablePANTHERPTHR11043:SF1TSET COMPLEX MEMBER TSTDcoord: 5..157
IPR039652Coatomer subunit zetaPANTHERPTHR11043ZETA-COAT PROTEINcoord: 5..157
IPR011012Longin-like domain superfamilySUPERFAMILY64356SNARE-likecoord: 3..157

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000088_piloncontigtig00000088_pilon:74118..74597 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra7691.t1Ggra7691.t1Gracilaria gracilis GNS1m malemRNAtig00000088_pilon 74118..74597 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra7691.t1 ID=Ggra7691.t1|Name=Ggra7691.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=160bp
MIVSVVIISYVTGGVIFSRFYGHELRSEQQQAKWLKKLRDATATDWVLLK
EDYPEQVATVGEVQIVYKLMGDAVLMLAGVEEHDALLLLELARSMDGSIR
GACKIPENKQQQTTVSAERRILQNYANLCLLVDEQIDDGDIDHLDPKVVL
KLIRMKPTR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR039652Coatomer_zeta
IPR011012Longin-like_dom_sf