Ggra7680.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra7680.t1
Unique NameGgra7680.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length305
Homology
BLAST of Ggra7680.t1 vs. uniprot
Match: A0A2V3IY60 (Cyclin-L1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IY60_9FLOR)

HSP 1 Score: 370 bits (950), Expect = 9.870e-126
Identity = 194/313 (61.98%), Postives = 231/313 (73.80%), Query Frame = 0
Query:    1 MLLHRFYTQVSIIAHNTVWAAGACINLSAKLADESRSLRHITNVIYDRLVDRQNVCVETVTIEERVCRRPLNFYGAEGYHWKHAVIETERHVLKELGFRLAVELPHNFVLIFVNTLRDKAGAPGWSEGHGPFNTLLQAAWDYANDLLIDQVCVREAPEALACACISLATSHYGSTLPEGWEDVLGSSADECERLVMYLKDLYKRPVETSCYRNFASSTVLEKFSMKPVETASDQNTR------DTKKRPLEEEEANEDSSL-RKSSHKAHSSDDVAPGSQSK---EKETVQHSNGLSKSGRLRRKRRRFEDAV 303
            MLLHRFYTQVSI+AH+T+WAAGACI LS KLADE+RSLRH+ NV+YDR++ RQN+ VETV +  R CRRP+ +YGAEGYHWK A I TERH+LKELGFRLA+ELPHNF+LIFVNTLRDKAGAPGWSE  G F  LLQ AWDYANDLLIDQ+CVREAPEALAC+CISLAT H   +LP+GWE VLGSS +ECERL +Y++ LYKR    SCY+N++ + VLEKFS++  E   DQ  R      DT KR    EE++E   + +K     +S+ D A     K   E +     NG  K  R +RKRRRFEDA 
Sbjct:    1 MLLHRFYTQVSIVAHSTIWAAGACILLSTKLADETRSLRHVVNVVYDRVIHRQNMPVETVAVGGRNCRRPIEYYGAEGYHWKFAFIATERHILKELGFRLAMELPHNFILIFVNTLRDKAGAPGWSECEGDFKALLQTAWDYANDLLIDQLCVREAPEALACSCISLATEHCEGSLPDGWETVLGSSKEECERLALYIRALYKRSAWISCYKNYSRAQVLEKFSLR--ELPHDQVQRSHIYEDDTGKRLRSVEESHESVQVSKKLCENENSTVDDATSKSDKNVGELDNPSVENGALKPVRRKRKRRRFEDAA 311          
BLAST of Ggra7680.t1 vs. uniprot
Match: A0A8C2UZA5 (Cyclin-L1 n=1 Tax=Chinchilla lanigera TaxID=34839 RepID=A0A8C2UZA5_CHILA)

HSP 1 Score: 98.6 bits (244), Expect = 2.130e-19
Identity = 66/207 (31.88%), Postives = 96/207 (46.38%), Query Frame = 0
Query:    1 MLLHRFYTQVSIIAHNTVWAAGACINLSAKLADESRSLRHITNVIYDRLVDRQNVCVETVTIEERVCRRPLNFYGAEGY-HWKHAVIETERHVLKELGFRLAVELPHNFVLIFVNTLRDKAGAPGWSEGHGPFNTLLQAAWDYANDLLIDQVCVREAPEALACACISLATSHYGSTLPEG--WEDVLGSSADECERLVMYLKDLYKR 204
            +L HRF+   S + H+    A ACI L+ K+ +  R +R + N  +                + R  R P      + Y + K  VI  ER VLKELGF + V+ PH  +++++  L  +              TL+Q AW+Y ND L   VCVR  PE +ACACI LA       LP    W  + G++ +E + + M    LY R
Sbjct:  110 VLFHRFFYSQSFVKHSFEIVAMACITLAFKIEEAPRRIRDVINAFHH-------------LHQLRGKRTPSPLILDQNYTNTKRQVIRAERRVLKELGFCVHVKHPHKIIVVYLQVLECERN-----------QTLVQTAWNYMNDSLRTNVCVRFQPETVACACIYLAARALQIPLPTRPHWFLLFGATEEEIQEICMETLRLYTR 292          
BLAST of Ggra7680.t1 vs. uniprot
Match: A0A8E0RWA3 (Cyclin-L2 n=1 Tax=Fasciolopsis buski TaxID=27845 RepID=A0A8E0RWA3_9TREM)

HSP 1 Score: 95.1 bits (235), Expect = 2.080e-18
Identity = 63/207 (30.43%), Postives = 96/207 (46.38%), Query Frame = 0
Query:    1 MLLHRFYTQVSIIAHNTVWAAGACINLSAKLADESRSLRHITNVIYDRLVDRQNVCVETVTIEERVCRRPLNFYGAEGYHWKHAVIETERHVLKELGFRLAVELPHNFVLIFVNTLRDKAGAPGWSEGHGPFNTLLQAAWDYANDLLIDQVCVREAPEALACACISLATSHYGSTLPE--GWEDVLGSSADECERLVMYLKDLYKRP 205
            +L  RF+   S + H     A AC+ L+AKL +  R +R I NV +     R+      V +++               + K+ +I+ ER VLKELGF +  + PH  V+ ++  L  ++ A             +Q AW+Y ND L   + VR  PEA+ACACI LA+   G  LP    W ++     +    + + L  LY RP
Sbjct:   81 VLYQRFFYSKSFVRHFYEHYAMACVFLAAKLEECPRRIRDIINVFHHMRQVREKKTPTPVMLDQSYT------------NLKNQIIKAERRVLKELGFCVHAKHPHKLVICYLQALGQESNAK-----------FVQTAWNYMNDSLRTDLFVRYLPEAIACACIYLASCKLGIPLPRHPAWWELFTVDEESVREIALCLVRLYARP 264          
BLAST of Ggra7680.t1 vs. uniprot
Match: A0A7S4DZZ4 (Hypothetical protein (Fragment) n=1 Tax=Lotharella globosa TaxID=91324 RepID=A0A7S4DZZ4_9EUKA)

HSP 1 Score: 92.4 bits (228), Expect = 2.310e-17
Identity = 61/206 (29.61%), Postives = 101/206 (49.03%), Query Frame = 0
Query:    1 MLLHRFYTQVSIIAHNTVWAAGACINLSAKLADESRSLRHITNVIYDRLVDRQNVCVETVTIEERVCRRPLNFYGAEGYHWKHAVIETERHVLKELGFRLAVELPHNFVLIFVNTLRDKAGAPGWSEGHGPFNTLLQAAWDYANDLLIDQVCVREAPEALACACISLATSHYGSTLPEG--WEDVLGSSADECERLVMYLKDLYKR 204
            +L HRF+ + S+I +  +  A   + L+ K+ +  R  R I NV +DRL+ R+      +++ +R  +R    Y      W+  + + E  +LKELG+ + V+ PH F+L +V T+         S+       L Q AW+Y ND +   VC+R  PE++A A I L        LP    W  + G++  E E +   + +LY R
Sbjct:   56 ILFHRFFYRKSMIDYEVLQVAMTSVFLATKVEESQRQTRDILNV-FDRLLKRRYY--RELSVFDRTSKR----YNK----WEQKIRKVELVMLKELGYTVYVDHPHRFILFYVRTIYGNQDLTDTSK------QLAQRAWNYLNDAMRTDVCLRYRPESIATAAIYLTARVLSIRLPSSPPWYHLFGATKMELEEISSIIAELYTR 244          
BLAST of Ggra7680.t1 vs. uniprot
Match: A0A3R7GFH5 (Cyclin-L2 n=4 Tax=Opisthorchiidae TaxID=6196 RepID=A0A3R7GFH5_CLOSI)

HSP 1 Score: 92.8 bits (229), Expect = 2.380e-17
Identity = 62/207 (29.95%), Postives = 95/207 (45.89%), Query Frame = 0
Query:    1 MLLHRFYTQVSIIAHNTVWAAGACINLSAKLADESRSLRHITNVIYDRLVDRQNVCVETVTIEERVCRRPLNFYGAEGYHWKHAVIETERHVLKELGFRLAVELPHNFVLIFVNTLRDKAGAPGWSEGHGPFNTLLQAAWDYANDLLIDQVCVREAPEALACACISLATSHYGSTLPE--GWEDVLGSSADECERLVMYLKDLYKRP 205
            +L  RF+   S + H     A ACI L+AKL +  R +R + NV +     R+      V +++               + K+ VI+ ER +LKELGF +  + PH  ++ ++  L  +  A             +Q AW+Y ND L   + VR  PEA+ACACI LA+   G  LP    W ++     +    + + L  LY RP
Sbjct:   81 VLYQRFFYSKSFVRHFYEHYAMACIFLAAKLEECPRRIRDVINVFHHIRQIREQRIPTPVMLDQSYS------------NLKNQVIKAERRLLKELGFCVHAKHPHKLIICYLQALEQEKNAK-----------FVQCAWNYMNDSLRTDLFVRYLPEAIACACIYLASCKLGIPLPRHPAWWEMFAVDEESVREISLCLVRLYARP 264          
BLAST of Ggra7680.t1 vs. uniprot
Match: H2KP81 (Cyclin-L2 n=1 Tax=Clonorchis sinensis TaxID=79923 RepID=H2KP81_CLOSI)

HSP 1 Score: 92.8 bits (229), Expect = 2.390e-17
Identity = 62/207 (29.95%), Postives = 95/207 (45.89%), Query Frame = 0
Query:    1 MLLHRFYTQVSIIAHNTVWAAGACINLSAKLADESRSLRHITNVIYDRLVDRQNVCVETVTIEERVCRRPLNFYGAEGYHWKHAVIETERHVLKELGFRLAVELPHNFVLIFVNTLRDKAGAPGWSEGHGPFNTLLQAAWDYANDLLIDQVCVREAPEALACACISLATSHYGSTLPE--GWEDVLGSSADECERLVMYLKDLYKRP 205
            +L  RF+   S + H     A ACI L+AKL +  R +R + NV +     R+      V +++               + K+ VI+ ER +LKELGF +  + PH  ++ ++  L  +  A             +Q AW+Y ND L   + VR  PEA+ACACI LA+   G  LP    W ++     +    + + L  LY RP
Sbjct:   81 VLYQRFFYSKSFVRHFYEHYAMACIFLAAKLEECPRRIRDVINVFHHIRQIREQRIPTPVMLDQSYS------------NLKNQVIKAERRLLKELGFCVHAKHPHKLIICYLQALEQEKNAK-----------FVQCAWNYMNDSLRTDLFVRYLPEAIACACIYLASCKLGIPLPRHPAWWEMFAVDEESVREISLCLVRLYARP 264          
BLAST of Ggra7680.t1 vs. uniprot
Match: A0A5N5T5C7 (Cyclin-L2 n=1 Tax=Armadillidium nasatum TaxID=96803 RepID=A0A5N5T5C7_9CRUS)

HSP 1 Score: 87.8 bits (216), Expect = 1.670e-16
Identity = 61/206 (29.61%), Postives = 90/206 (43.69%), Query Frame = 0
Query:    1 MLLHRFYTQVSIIAHNTVWAAGACINLSAKLADESRSLRHITNVIYDRLVDRQNVCVETVTIEERVCRRPLNFYGAEGYHWKHAVIETERHVLKELGFRLAVELPHNFVLIFVNTLRDKAGAPGWSEGHGPFNTLLQAAWDYANDLLIDQVCVREAPEALACACISLATSHYGSTLPEG--WEDVLGSSADECERLVMYLKDLYKR 204
            +L  RFY   S +       A ACI L+ K+      +RH+ NV       R     + V ++        N+        K+ VI  E  +LKELGF   V+LPH   ++++  L                  L+Q+ W++ ND L   VCVR +PE +AC+CI LA       LPE   W  V G +  + E++   +  LY R
Sbjct:    6 VLFQRFYYSKSFVRCPVEITAMACITLAWKMEVGQMEIRHVINVFNHMKQFRNGEVFDPVILDR-------NYVAL-----KNQVIRAETRLLKELGFCCHVKLPHKISIMYLRFLLADDN-----------KKLVQSTWNFMNDSLRTDVCVRYSPETIACSCIWLAGRQLKIPLPENPPWYHVFGVNLSDIEKIAASIMKLYTR 188          
BLAST of Ggra7680.t1 vs. uniprot
Match: A0A504YTN1 (Cyclin-L2 n=3 Tax=Fasciola TaxID=6191 RepID=A0A504YTN1_FASGI)

HSP 1 Score: 89.7 bits (221), Expect = 2.630e-16
Identity = 61/207 (29.47%), Postives = 94/207 (45.41%), Query Frame = 0
Query:    1 MLLHRFYTQVSIIAHNTVWAAGACINLSAKLADESRSLRHITNVIYDRLVDRQNVCVETVTIEERVCRRPLNFYGAEGYHWKHAVIETERHVLKELGFRLAVELPHNFVLIFVNTLRDKAGAPGWSEGHGPFNTLLQAAWDYANDLLIDQVCVREAPEALACACISLATSHYGSTLPE--GWEDVLGSSADECERLVMYLKDLYKRP 205
            +L  RF+   S + H     A AC+ L+AKL +  R +R I NV +     R+      V +++               + K+ +I+ ER VLKELGF +  + PH   + + + +         + G       +Q AW+Y ND L   + VR  PEA+ACACI LA+   G  LP    W ++     +    + + L  LY RP
Sbjct:   81 VLYQRFFYSKSFVRHFYEHYAMACVFLAAKLEECPRRIRDIINVFHHMRQIREKKTPTPVLLDQSYT------------NLKNQIIKAERRVLKELGFCVHAKHPHKVSVAYTHFILQLVICYLQALGQESNAKFVQTAWNYMNDSLRTDLFVRYLPEAIACACIYLASCKLGIPLPRHPAWWEMFTVDEESVREIALCLVRLYARP 275          
BLAST of Ggra7680.t1 vs. uniprot
Match: A0A2P6NUB4 (Uncharacterized protein n=1 Tax=Planoprotostelium fungivorum TaxID=1890364 RepID=A0A2P6NUB4_9EUKA)

HSP 1 Score: 88.6 bits (218), Expect = 2.760e-16
Identity = 65/209 (31.10%), Postives = 98/209 (46.89%), Query Frame = 0
Query:    1 MLLHRFYTQVSIIAHNTVWAAGACINLSAKLADESRSLRHITNVIYDRLVDRQNVCVETVTIEERVCRRPLNFY---GAEGYHWKHAVIETERHVLKELGFRLAVELPHNFVLIFVNTLRDKAGAPGWSEGHGPFNTLLQAAWDYANDLLIDQVCVREAPEALACACISLATSHYGSTLPEG---WEDVLGSSADECERLVMYLKDLYK 203
            +LL RFY + S+  H +  AA + + L+ K+A+  R  R + NV +  L      C      EE      + F    G E +  K+  I TER +LKELGF + V LP+ +++ F+  L     AP           + Q  W+Y ND L    CV   PE +A ACI +A       LPE    W  +  +S D+  ++  +++ LYK
Sbjct:   59 VLLQRFYYRSSLARHCSKSAAISSLFLACKVAETPRKTRDLLNVFHRLL------CRSQEKREEEKKGGEITFLEVGGQEYWKLKNDCINTERFMLKELGFIVYVVLPYKYIIFFIKLL----DAPP---------EVRQRTWNYVNDSLRTPACVVFGPEVVAAACIYMAARDLSVPLPESPSPWYLLFETSLDQITQVCWHIQQLYK 248          
BLAST of Ggra7680.t1 vs. uniprot
Match: A0A7S2TYB6 (Hypothetical protein n=1 Tax=Lotharella oceanica TaxID=641309 RepID=A0A7S2TYB6_9EUKA)

HSP 1 Score: 89.0 bits (219), Expect = 3.800e-16
Identity = 59/206 (28.64%), Postives = 101/206 (49.03%), Query Frame = 0
Query:    1 MLLHRFYTQVSIIAHNTVWAAGACINLSAKLADESRSLRHITNVIYDRLVDRQNVCVETVTIEERVCRRPLNFYGAEGYHWKHAVIETERHVLKELGFRLAVELPHNFVLIFVNTLRDKAGAPGWSEGHGPFNTLLQAAWDYANDLLIDQVCVREAPEALACACISLATSHYGSTLPEG--WEDVLGSSADECERLVMYLKDLYKR 204
            +L HRF+ + S+I +  +  A   + L+ K+ +  R  R I NV +DRL+ R+      +++ +R  +R    Y      W+  + + E  +LKE+G+ + V+ PH F+L +V T+         S+       L Q AW++ ND +   VC+R  PE++A A I L        LP    W  + G++  E E +   + +LY R
Sbjct:   56 ILFHRFFYRKSMIDYEVLQVAMTSVFLATKIEESQRQTRDILNV-FDRLLKRRYY--RELSVFDRTSKR----YNK----WEAKMRKVELVMLKEMGYTVYVDHPHRFILFYVRTIYGNQDLTDASK------QLAQRAWNFLNDAMRTDVCLRYRPESIATAAIYLTARVLSIRLPSNPPWYHLFGATRMELEEISSIISELYTR 244          
The following BLAST results are available for this feature:
BLAST of Ggra7680.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IY609.870e-12661.98Cyclin-L1 n=1 Tax=Gracilariopsis chorda TaxID=4483... [more]
A0A8C2UZA52.130e-1931.88Cyclin-L1 n=1 Tax=Chinchilla lanigera TaxID=34839 ... [more]
A0A8E0RWA32.080e-1830.43Cyclin-L2 n=1 Tax=Fasciolopsis buski TaxID=27845 R... [more]
A0A7S4DZZ42.310e-1729.61Hypothetical protein (Fragment) n=1 Tax=Lotharella... [more]
A0A3R7GFH52.380e-1729.95Cyclin-L2 n=4 Tax=Opisthorchiidae TaxID=6196 RepID... [more]
H2KP812.390e-1729.95Cyclin-L2 n=1 Tax=Clonorchis sinensis TaxID=79923 ... [more]
A0A5N5T5C71.670e-1629.61Cyclin-L2 n=1 Tax=Armadillidium nasatum TaxID=9680... [more]
A0A504YTN12.630e-1629.47Cyclin-L2 n=3 Tax=Fasciola TaxID=6191 RepID=A0A504... [more]
A0A2P6NUB42.760e-1631.10Uncharacterized protein n=1 Tax=Planoprotostelium ... [more]
A0A7S2TYB63.800e-1628.64Hypothetical protein n=1 Tax=Lotharella oceanica T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.10.472.10coord: 1..100
e-value: 1.0E-12
score: 50.0
NoneNo IPR availableGENE3D1.10.472.10coord: 102..217
e-value: 5.0E-13
score: 51.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 233..264
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 229..304
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 265..287
NoneNo IPR availablePANTHERPTHR10026:SF13LD24704Pcoord: 2..270
NoneNo IPR availablePROSITEPS51257PROKAR_LIPOPROTEINcoord: 1..24
score: 5.0
IPR043198Cyclin/Cyclin-like subunit Ssn8PANTHERPTHR10026CYCLINcoord: 2..270
IPR036915Cyclin-like superfamilySUPERFAMILY47954Cyclin-likecoord: 103..204
IPR036915Cyclin-like superfamilySUPERFAMILY47954Cyclin-likecoord: 2..101

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000088_piloncontigtig00000088_pilon:47675..48589 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra7680.t1Ggra7680.t1Gracilaria gracilis GNS1m malemRNAtig00000088_pilon 47675..48589 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra7680.t1 ID=Ggra7680.t1|Name=Ggra7680.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=305bp
MLLHRFYTQVSIIAHNTVWAAGACINLSAKLADESRSLRHITNVIYDRLV
DRQNVCVETVTIEERVCRRPLNFYGAEGYHWKHAVIETERHVLKELGFRL
AVELPHNFVLIFVNTLRDKAGAPGWSEGHGPFNTLLQAAWDYANDLLIDQ
VCVREAPEALACACISLATSHYGSTLPEGWEDVLGSSADECERLVMYLKD
LYKRPVETSCYRNFASSTVLEKFSMKPVETASDQNTRDTKKRPLEEEEAN
EDSSLRKSSHKAHSSDDVAPGSQSKEKETVQHSNGLSKSGRLRRKRRRFE
DAVP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR043198Cyclin/Ssn8
IPR036915Cyclin-like_sf