Ggra7672.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra7672.t1
Unique NameGgra7672.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length336
Homology
BLAST of Ggra7672.t1 vs. uniprot
Match: A0A2V3J358 (G domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J358_9FLOR)

HSP 1 Score: 120 bits (302), Expect = 1.410e-28
Identity = 66/221 (29.86%), Postives = 118/221 (53.39%), Query Frame = 0
Query:    2 ENKVIMLGNPGCGKSTLLNTALGAVYFDSGTSAGHGILPSREEVRDGPTTYIDTPGLDDPALREQAAQYISNQLSHEGTVKLVFVMKCDDLRIRGSDQAALKMVLDALQARGIDCNMRFSIIINQLFDYEIRAIREDPAVQTKILSFINGGYKVRHVGWLPMEPSAKGKSGALLSCRERILA-FFDAAPYITLQKGMHVDVKHEQFDEMRSQMSNVIRGLQ 221
            +  VI+ GNPG GKS++LN+ +G V F+SG S G G+  + +  R G   Y DTPGLDD  +R++AA+ IS      G +KL+FV   +  R+R +D A ++++++A+Q+ G+D   +FSIIIN+  + E+  + E+   +  +   +N       + ++P    A GK   L++    +   F   AP   + +     +    F+    ++  ++  L+
Sbjct:    4 QEHVIVAGNPGSGKSSILNSIIGRVKFESGISLGSGLTTALDSKRIGNVLYSDTPGLDDARIRDRAAKEISYAFRRGGKIKLIFVSTLEAGRLRSTDLATMRIIVEAIQSVGVDPAKQFSIIINKC-EPEVLELLENKKNRAMLEVPLNSAAPAGRIAYMPYRDYAAGKHNVLVTTDSNVYKEFLRTAPAFDMSRNKSFAINANGFELTVQRLQEMVEELE 223          
BLAST of Ggra7672.t1 vs. uniprot
Match: A0A2V3J217 (AIG1-type G domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J217_9FLOR)

HSP 1 Score: 113 bits (283), Expect = 3.900e-25
Identity = 73/221 (33.03%), Postives = 118/221 (53.39%), Query Frame = 0
Query:    4 KVIMLGNPGCGKSTLLNTALGAVYFDSGTSAGHGILPSREEVRDGPTTYIDTPGLDDPALREQAAQYISNQLSHEGTVKLVFVMKCDDLRIRGSDQAALKMVLDALQARGIDCNMRFSIIINQLFDYEIRAIREDPAVQTKILSFINGGY----KVRHVGWLPMEPSAKGKSGALLS--CRERILAFFDAAPYITLQKGMHVDVKHEQFDEMRSQMSNVIR 218
            +VI++GNPG GKST+ NT L    F+SG S G G+  S      G  T++DTPGLDD   R  AA+ IS  L    TVK+VFV   +  R+R +D   L+ ++ AL+    D   ++++IIN+  D   + + +  +++ +  + + G Y    + + V  +  E S +GKSG LL+    ER+    + AP I L     V +K + +++   Q+   +R
Sbjct:   65 RVIVIGNPGVGKSTIQNTLLQKTVFESGISLGGGLTKSTATCTKGDLTFVDTPGLDDLYNRRTAAKEISAALRGPSTVKMVFVTALEAGRVRSADVCTLQTIVTALREVVGDMTRKYTLIINKCEDSLAQTLTKKDSLELR--ASVLGPYFAVEEAKQVEIIRAETSIRGKSGTLLNRQAAERLRGLIERAPTIDLPAEPVVRLKLKTYEKNAQQIDEEMR 283          
BLAST of Ggra7672.t1 vs. uniprot
Match: A0A225X3J8 (G domain-containing protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225X3J8_9STRA)

HSP 1 Score: 108 bits (270), Expect = 7.990e-24
Identity = 65/217 (29.95%), Postives = 110/217 (50.69%), Query Frame = 0
Query:    6 IMLGNPGCGKSTLLNTALGAVYFDSGTSAGHGILPSREEVRDGPTTYIDTPGLDDPALREQAAQYISNQLSHEGTVKLVFVMKCDDLRIRGSDQAALKMVLDALQARGIDCNMRFSIIINQLFDYEIRAIREDPAVQTKILSFINGG-YKVRHVGWLPMEPSAKGKSGALLSCRERILAFFD-AAPYITLQKGMHVDVKHEQFDEMRSQMSNVIRGL 220
            + LGNPG GKSTLLN  +G   F +G S   G     E+       Y+DTPGL D  L+++A   I   L   GT KL F+++ ++ R+   D A ++M++ ++  R +     F+II+N +   E +AI E      + ++ IN G Y   H+ ++P  P    K  AL++    ++ FF   AP + ++     DV  ++F  + +++   +  L
Sbjct:    7 LFLGNPGTGKSTLLNCIVGEQVFTAGISYESGFTEVVEKYEHKGNVYMDTPGLSDRTLKQRAIAAIIEALRQSGTYKLFFIVRIENGRVVADDLAIIEMMISSIDQRDVP----FTIIVNNIRKREYKAIMERGDEYMQFVTLINAGKYCTPHILFIPTLPDLDKKDNALVTLPNFVMNFFHFEAPSVVIESDHVNDVTQDEFTRVLNKLREELERL 219          
BLAST of Ggra7672.t1 vs. uniprot
Match: A0A0L0T1Q2 (G domain-containing protein n=1 Tax=Allomyces macrogynus (strain ATCC 38327) TaxID=578462 RepID=A0A0L0T1Q2_ALLM3)

HSP 1 Score: 108 bits (270), Expect = 1.750e-22
Identity = 67/228 (29.39%), Postives = 122/228 (53.51%), Query Frame = 0
Query:    5 VIMLGNPGCGKSTLLNTALGAVYFDSGTSAGHGILPSRE-EVRDGPTTYIDTPGLDDPALREQAAQYISNQLS-HEGTVKLVFVMKCDDLRIRGSDQAALKMVLDALQARGIDCNMRFSIIINQLFDYEIRAIREDPAVQTKILSFINGG-YKVRHVGWLPMEPSAKGKSGALL--SCRERILAFFDAAPYITLQKGMHVDVKHEQFDEMRSQMSNVIRGLQNDVSKQ 227
            V+ +GNPG GKSTL+N A  ++   +G+SAGHGI   +  +     TT+IDTPGL D   R +AA  I++ L   EG  +L+FV+  +  R++  D A L +VL+A++ +    N+ + +IIN++ +  ++ +  +     K++  +N G Y   H+   P +  A+     ++  S    +L F +  P I ++      +K   FD+  +++ +++  +    SKQ
Sbjct:  221 VMAIGNPGSGKSTLINGAAQSIVTQAGSSAGHGIQHDKLLKFEINGTTWIDTPGLSDVKYRTRAAGQITDALKDQEGLYRLIFVVTTESGRVKPDDLATLTIVLNAIRKK----NVPYGVIINKISERLLQKMLTEAEFYDKLICSLNSGPYSTNHIFLAPEDQDARDADNCIIPASAMTPVLNFIETVPCIAIRPTDVEAIKTSDFDDQEAKLKDLVEMMITAHSKQ 444          
BLAST of Ggra7672.t1 vs. uniprot
Match: V9DTI6 (AIG1-type G domain-containing protein (Fragment) n=2 Tax=Phytophthora parasitica TaxID=4792 RepID=V9DTI6_PHYPR)

HSP 1 Score: 103 bits (257), Expect = 4.370e-22
Identity = 64/230 (27.83%), Postives = 114/230 (49.57%), Query Frame = 0
Query:    6 IMLGNPGCGKSTLLNTALGAVYFDSGTSAGHGILPSREEVRDGPTTYIDTPGLDDPALREQAAQYISNQLSHEGTVKLVFVMKCDDLRIRGSDQAALKMVLDALQARGIDCNMRFSIIINQLFDYEIRAIREDPAVQTKILSFINGG-YKVRHVGWLPMEPSAKGKSGALLSCRERILAFF-DAAPYITLQKGMHVDVKHEQFDEMRSQMSNVIRGLQNDVSKQHQLLQE 233
            + LGNPG GKSTL+N  +G   F SG S G G+    ++       Y+DTPGL D  L ++AA  I+  L   GT KL F+++ ++ R+   D + ++ V+  +       N++FS+I+N +   +   I +      K+++ IN G Y    + ++P  P       A+         F  + AP + +      +V+ E+F E+  ++  V++ L+ D +   Q ++E
Sbjct:   18 LFLGNPGTGKSTLINCLIGKKVFKSGISYGSGLTDFFQKYEHDSILYMDTPGLADRTLMKRAAASITEALRFSGTYKLFFMVRLENGRVVADDLSTIETVMSCIDMN----NVQFSVIVNNVKKRQFEEIMKKDYAFKKVVTMINAGQYTTPVIEFIPSLPELDEADNAVARLPRHATTFIQNEAPSVVIDPEDVREVRPEEFLELVKELHQVLKHLREDNNALRQRMEE 243          
BLAST of Ggra7672.t1 vs. uniprot
Match: A0A225X4S8 (G domain-containing protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225X4S8_9STRA)

HSP 1 Score: 101 bits (251), Expect = 2.550e-21
Identity = 65/235 (27.66%), Postives = 118/235 (50.21%), Query Frame = 0
Query:    2 ENKVIMLGNPGCGKSTLLNTALGAVYFDSGTSAGHGILPSREEVRDGPTTYIDTPGLDDPALREQAAQYISNQLSHEGTVKLVFVMKCDDLRIRGSDQAALKMVLDALQARGIDCNMRFSIIINQLFDYEIRAIREDPAVQTKILSFING-GYKVRHVGWLPMEPSAKGKSGALLSCRERILAFFD-AAPYITLQKGMHVDVKHEQFDEMRSQMSNVIRGLQNDVSKQHQLLQER 234
            E   + +GNPG GKSTL+N  +G+  FDSG S G G+  + +        Y+DTPGL D  ++E AA  I+  L   GT KL F+++ ++ R+   D A +++VL ++    I     F II+N +   +   + E  A   K+++ IN   +   H+ ++P+      +  A+      + +F     P + + + +   +K E F ++    S  +R +Q ++ + + LL+ R
Sbjct:   17 EVNYLFMGNPGTGKSTLINCLVGSPIFDSGLSYGGGMTKNFQARTHENVRYMDTPGLADRNIQEMAASAITEALQQSGTYKLFFMVRLENGRVVSDDLATIEIVLSSIDLEEIP----FGIIVNNVKKRQYTKMMEKGADYLKVVTLINSINHMTPHITFIPVLDDLDEEDNAVTDLPGEVESFIRFECPAVPISRQIVKPIKIEDFKKI----SEKLRDVQEELLRDNALLERR 243          
BLAST of Ggra7672.t1 vs. uniprot
Match: A0A2P4Y7D4 (AIG1-type G domain-containing protein n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4Y7D4_9STRA)

HSP 1 Score: 103 bits (258), Expect = 3.900e-21
Identity = 65/226 (28.76%), Postives = 116/226 (51.33%), Query Frame = 0
Query:    1 MENKVIMLGNPGCGKSTLLNTALGAVYFDSGTSAGHGILPSREEVRDGPTTYIDTPGLDDPALREQAAQYISNQLSHEGTVKLVFVMKCDDLRIRGSDQAALKMVLDALQARGIDCNMRFSIIINQLFDYEIRAIREDPAVQTKILSFINGG-YKVRHVGWLPMEPSAKGKSGALLSCRERILAFFD--AAPYITLQKGMHVDVKHEQFDEMRSQMSNVIRGLQND 223
            M+   + LGNPG GKSTL+N  +G   FDSG S G G+    ++       Y+DTPGL D  ++EQAA  I+  L   GT KL F+++ ++ R+   D A ++ V+D++  + +     FSI++N +   + +A+ +  +   K+++ IN   Y   ++ ++P   +   K          +  FF   +   I   K +H D+K E F  + + + + +  L++D
Sbjct:    1 MKENYLFLGNPGTGKSTLINCLIGQQAFDSGLSYGAGMTQFFQKFTHHDIVYMDTPGLADRRIKEQAATAITTALRQSGTYKLFFMVRLENGRVVSDDLATIETVMDSIDMKDVP----FSIVVNNVKKRQYQAMMKKGSEFFKVVTLINSSKYTTPYITFIPTLENLDEKDNQRTELPHDVADFFQVQSPSNIIPCKRVH-DIKIEDFRALVNGLRDELEHLRSD 221          
BLAST of Ggra7672.t1 vs. uniprot
Match: A0A329RXB9 (G domain-containing protein n=1 Tax=Phytophthora cactorum TaxID=29920 RepID=A0A329RXB9_9STRA)

HSP 1 Score: 100 bits (249), Expect = 4.790e-21
Identity = 60/234 (25.64%), Postives = 116/234 (49.57%), Query Frame = 0
Query:    2 ENKVIMLGNPGCGKSTLLNTALGAVYFDSGTSAGHGILPSREEVRDGPTTYIDTPGLDDPALREQAAQYISNQLSHEGTVKLVFVMKCDDLRIRGSDQAALKMVLDALQARGIDCNMRFSIIINQLFDYEIRAIREDPAVQTKILSFINGG-YKVRHVGWLPMEPSAKGKSGALLSCRERILAFFDA-APYITLQKGMHVDVKHEQFDEMRSQMSNVIRGLQNDVSKQHQLLQE 233
            +   + LGNPG GKSTL+N  +G   F +G S G G+    ++       Y+DTPGL D  L ++AA  I+  L   GT KL F+++ ++ R+   D + ++ V+  +    +     F++I+N +   + +A+ E      K+++ +N G YK   + ++P       +  A+ +  + +  F    AP + +      +VK E+F  +  ++   ++ L+ D +   Q ++E
Sbjct:    3 KTNYLFLGNPGTGKSTLINCLIGRKVFQAGVSYGGGLTDFFQKHEHNGNVYMDTPGLADRKLMKKAAAAITEALRQSGTYKLFFMVRLENGRVVADDLSTIETVISCINMEDVP----FTVIVNNVKKRQFKAMMEKGDAFWKVVTLVNAGKYKTPRIVFIPTLEDLDEEDNAIATLPDYVTHFMQLEAPTVVIAPEDVSEVKAEEFKRLVEELRVELQRLREDNNALRQRMEE 232          
BLAST of Ggra7672.t1 vs. uniprot
Match: A0A329RXV8 (G domain-containing protein n=1 Tax=Phytophthora cactorum TaxID=29920 RepID=A0A329RXV8_9STRA)

HSP 1 Score: 101 bits (251), Expect = 6.150e-21
Identity = 66/230 (28.70%), Postives = 113/230 (49.13%), Query Frame = 0
Query:    6 IMLGNPGCGKSTLLNTALGAVYFDSGTSAGHGILPSREEVRDGPTTYIDTPGLDDPALREQAAQYISNQLSHEGTVKLVFVMKCDDLRIRGSDQAALKMVLDALQARGIDCNMRFSIIINQLFDYEIRAIREDPAVQTKILSFING-GYKVRHVGWLPMEPSAKGKSGALLSCRERILAFFDAAPYITLQKGMHVDVKHEQFDEMRSQMSNVIRGLQNDVSKQHQLLQER 234
            + LGNPG GKSTL+N   GA  F SG S G G+    +        Y+DTPGL D  ++E+AA  I+  L   GT KL F+++ ++ R+   D A +++VL +++   I     F++I+N +   +   + E  A   K+++ IN   +   H+ ++P+      +  A+      +  F   AP + +   +   +K E F ++    S  +RG Q  +     LL+ R
Sbjct:   16 LFLGNPGTGKSTLINCLAGAAIFKSGLSYGGGLTKEFQTRIHDNVQYMDTPGLADRNIQEKAAAAITEALRQSGTYKLFFMVRLENGRVVSDDLATIEIVLSSIELDEIP----FAVIVNNVKKRQYTKMMEKSADYLKVVTLINSINHTTPHIVFIPVIGDLDEEDNAVTKLPVDVERFIREAPGVQIPPHVVKPIKIEDFKKV----SETLRGEQEQLLNDKMLLERR 237          
BLAST of Ggra7672.t1 vs. uniprot
Match: A0A225X298 (G domain-containing protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225X298_9STRA)

HSP 1 Score: 100 bits (248), Expect = 6.910e-21
Identity = 61/234 (26.07%), Postives = 115/234 (49.15%), Query Frame = 0
Query:    2 ENKVIMLGNPGCGKSTLLNTALGAVYFDSGTSAGHGILPSREEVRDGPTTYIDTPGLDDPALREQAAQYISNQLSHEGTVKLVFVMKCDDLRIRGSDQAALKMVLDALQARGIDCNMRFSIIINQLFDYEIRAIREDPAVQTKILSFINGG-YKVRHVGWLPMEPSAKGKSGALLSCRERILAFFD-AAPYITLQKGMHVDVKHEQFDEMRSQMSNVIRGLQNDVSKQHQLLQE 233
            +   + LGNPG GKSTL+N  +GA  F SG + G G+    ++       Y+DTPGL D  L ++AA  I+  L   GT KL F+++ ++ R+   D + ++ V+  +  + +     F+II+N +   +  A+ +      ++++ IN G Y    + ++P  P    +  A+ S    +  F    AP + ++     +VK ++F  +  ++   +  L+ D     Q ++E
Sbjct:    3 KTNYLFLGNPGTGKSTLINCIVGAQIFKSGINYGRGLTEFFQKHDYNGNVYMDTPGLADRKLMQKAATAITEALRQSGTYKLFFMVRLENGRVVADDLSTIETVISCIAQKDVP----FTIIVNNIKKRQYEAMMKGGDGYREVVTLINAGTYTTPQIVFIPTLPELDEEDNAIASLPNNLTNFLHFEAPSVVIEPEQVSEVKTDEFARVVKELREELERLRGDNEALRQRMEE 232          
The following BLAST results are available for this feature:
BLAST of Ggra7672.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3J3581.410e-2829.86G domain-containing protein n=1 Tax=Gracilariopsis... [more]
A0A2V3J2173.900e-2533.03AIG1-type G domain-containing protein n=1 Tax=Grac... [more]
A0A225X3J87.990e-2429.95G domain-containing protein n=1 Tax=Phytophthora m... [more]
A0A0L0T1Q21.750e-2229.39G domain-containing protein n=1 Tax=Allomyces macr... [more]
V9DTI64.370e-2227.83AIG1-type G domain-containing protein (Fragment) n... [more]
A0A225X4S82.550e-2127.66G domain-containing protein n=1 Tax=Phytophthora m... [more]
A0A2P4Y7D43.900e-2128.76AIG1-type G domain-containing protein n=1 Tax=Phyt... [more]
A0A329RXB94.790e-2125.64G domain-containing protein n=1 Tax=Phytophthora c... [more]
A0A329RXV86.150e-2128.70G domain-containing protein n=1 Tax=Phytophthora c... [more]
A0A225X2986.910e-2126.07G domain-containing protein n=1 Tax=Phytophthora m... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 242..291
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 270..299
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 273..290
NoneNo IPR availableCDDcd00882Ras_like_GTPasecoord: 8..126
e-value: 1.65419E-7
score: 48.2216
IPR006073GTP binding domainPFAMPF01926MMR_HSR1coord: 4..98
e-value: 2.7E-8
score: 33.9
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 2..127
e-value: 3.5E-15
score: 58.1
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 4..126

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000088_piloncontigtig00000088_pilon:30123..31287 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra7672.t1Ggra7672.t1Gracilaria gracilis GNS1m malemRNAtig00000088_pilon 30123..31287 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra7672.t1 ID=Ggra7672.t1|Name=Ggra7672.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=336bp
MENKVIMLGNPGCGKSTLLNTALGAVYFDSGTSAGHGILPSREEVRDGPT
TYIDTPGLDDPALREQAAQYISNQLSHEGTVKLVFVMKCDDLRIRGSDQA
ALKMVLDALQARGIDCNMRFSIIINQLFDYEIRAIREDPAVQTKILSFIN
GGYKVRHVGWLPMEPSAKGKSGALLSCRERILAFFDAAPYITLQKGMHVD
VKHEQFDEMRSQMSNVIRGLQNDVSKQHQLLQERDNMLVRVKEETKHQLQ
SLKEESLMLLRNMELQMQRSRRQALQRQREEQKSADAYEKEARNPVGSLP
SKGRKRAIFAGACTGSAAGAIIGKVIANLGNGYLL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006073GTP-bd
IPR027417P-loop_NTPase